Gene annotation
Transcriptome id Sobic.007G002500.1,Sobic.007G002500.4,Sobic.007G002500.3,Sobic.007G002500.2
Synonym Sb07g000420, TLP10, AtTLP10
Functional annotation OsFBT12 - F-box and tubby domain containing protein, expressed
UniProt A0A1B6PER7 , A0A1B6PER5 , A0A1B6PEW9 , A0A1B6PEP1
Pfam PF01167 PF00646 PF01167
Panther DB PTHR16517 PTHR16517:SF42
NCBI CDD KOG2502; Tub family proteins
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G25280 : tubby like protein 10
RAP-DB (Rice) LOC_Os08g01290.3,LOC_Os08g01290.7,LOC_Os08g01290.1 : OsFBT12 - F-box and tubby domain containing protein, expressed
MaizeGDB (Corn) Zm00025a033670 , Zm00025a026715
Brachypodium KQJ94772
Barley HORVU5Hr1G023650.1 , HORVU5Hr1G040000.6 , HORVU5Hr1G040000.5 , HORVU5Hr1G040000.4 , HORVU5Hr1G040000.3 , HORVU5Hr1G040000.2 , HORVU5Hr1G040000.1
Wheat TraesCS5A02G124100 , TraesCS5D02G132000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G001800 expressed protein -
2 Sobic.001G038700 membrane associated DUF588 domain containing protein, putative, expressed -
3 Sobic.002G206900 GEX2, putative, expressed -
4 Sobic.004G127600 glyoxalase family protein, putative, expressed K01759: GLO1, lactoylglutathione lyase
5 Sobic.009G186300 protein kinase, putative, expressed -
6 Sobic.006G157450 - -
7 Sobic.001G370800 - -
8 Sobic.006G249600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
9 Sobic.009G094200 - -
10 Sobic.003G263900 reticulon domain containing protein, putative, expressed -
11 Sobic.003G155000 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
12 Sobic.003G262600 OsWAK10d - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
13 Sobic.010G129100 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
14 Sobic.006G134300 - -
15 Sobic.010G000200 expressed protein -
16 Sobic.006G138300 EF hand family protein, putative, expressed -
17 Sobic.002G187900 expressed protein -
18 Sobic.004G173200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
19 Sobic.004G072201 - -
20 Sobic.010G012200 - K00851: E2.7.1.12, gntK, gluconokinase


Gene co-expression network
sample Sobic007G002500 Sobic007G002500 Sobic001G001800 Sobic001G001800 Sobic007G002500--Sobic001G001800 Sobic001G038700 Sobic001G038700 Sobic007G002500--Sobic001G038700 Sobic002G206900 Sobic002G206900 Sobic007G002500--Sobic002G206900 Sobic004G127600 Sobic004G127600 Sobic007G002500--Sobic004G127600 Sobic009G186300 Sobic009G186300 Sobic007G002500--Sobic009G186300 Sobic006G157450 Sobic006G157450 Sobic007G002500--Sobic006G157450 Sobic001G370800 Sobic001G370800 Sobic007G002500--Sobic001G370800 Sobic006G249600 Sobic006G249600 Sobic007G002500--Sobic006G249600 Sobic009G094200 Sobic009G094200 Sobic007G002500--Sobic009G094200 Sobic004G033650 Sobic004G033650 Sobic001G001800--Sobic004G033650 Sobic001G001800--Sobic009G094200 Sobic009G026600 Sobic009G026600 Sobic001G001800--Sobic009G026600 Sobic009G074800 Sobic009G074800 Sobic001G001800--Sobic009G074800 Sobic008G142200 Sobic008G142200 Sobic001G001800--Sobic008G142200 Sobic001G191500 Sobic001G191500 Sobic001G001800--Sobic001G191500 Sobic009G026700 Sobic009G026700 Sobic001G001800--Sobic009G026700 Sobic001G001800--Sobic009G186300 Sobic001G001800--Sobic001G038700 Sobic001G038700--Sobic006G157450 Sobic003G263900 Sobic003G263900 Sobic001G038700--Sobic003G263900 Sobic002G309300 Sobic002G309300 Sobic001G038700--Sobic002G309300 Sobic004G218400 Sobic004G218400 Sobic001G038700--Sobic004G218400 Sobic010G012200 Sobic010G012200 Sobic001G038700--Sobic010G012200 Sobic008G170800 Sobic008G170800 Sobic001G038700--Sobic008G170800 Sobic004G072201 Sobic004G072201 Sobic001G038700--Sobic004G072201 Sobic001G038700--Sobic009G026600 Sobic001G038700--Sobic008G142200 Sobic001G454600 Sobic001G454600 Sobic002G206900--Sobic001G454600 Sobic003G155000 Sobic003G155000 Sobic002G206900--Sobic003G155000 Sobic003G155800 Sobic003G155800 Sobic002G206900--Sobic003G155800 Sobic003G362800 Sobic003G362800 Sobic002G206900--Sobic003G362800 Sobic003G253700 Sobic003G253700 Sobic002G206900--Sobic003G253700 Sobic001G483001 Sobic001G483001 Sobic002G206900--Sobic001G483001 Sobic001G520000 Sobic001G520000 Sobic002G206900--Sobic001G520000 Sobic002G206900--Sobic008G170800 Sobic009G252600 Sobic009G252600 Sobic002G206900--Sobic009G252600 Sobic002G187900 Sobic002G187900 Sobic004G127600--Sobic002G187900 Sobic004G127600--Sobic003G263900 Sobic006G255200 Sobic006G255200 Sobic004G127600--Sobic006G255200 Sobic001G442000 Sobic001G442000 Sobic004G127600--Sobic001G442000 Sobic001G212900 Sobic001G212900 Sobic004G127600--Sobic001G212900 Sobic001G109400 Sobic001G109400 Sobic004G127600--Sobic001G109400 Sobic002G374000 Sobic002G374000 Sobic004G127600--Sobic002G374000 Sobic004G127600--Sobic004G072201 Sobic004G127600--Sobic001G038700 Sobic009G186300--Sobic001G001800 Sobic009G186300--Sobic001G038700 Sobic001G460900 Sobic001G460900 Sobic009G186300--Sobic001G460900 Sobic009G186300--Sobic009G094200 Sobic003G058300 Sobic003G058300 Sobic009G186300--Sobic003G058300 Sobic009G186300--Sobic004G072201 Sobic005G027350 Sobic005G027350 Sobic009G186300--Sobic005G027350 Sobic009G186300--Sobic002G309300 Sobic005G068000 Sobic005G068000 Sobic009G186300--Sobic005G068000 Sobic006G157450--Sobic001G038700 Sobic006G157450--Sobic008G170800 Sobic006G157450--Sobic001G191500 Sobic006G157450--Sobic001G520000 Sobic006G157450--Sobic010G012200 Sobic006G157450--Sobic003G253700 Sobic006G157450--Sobic003G155000 Sobic006G157450--Sobic001G483001 Sobic008G190600 Sobic008G190600 Sobic006G157450--Sobic008G190600 Sobic001G370800--Sobic009G026600 Sobic004G173200 Sobic004G173200 Sobic001G370800--Sobic004G173200 Sobic001G370800--Sobic001G038700 Sobic001G370800--Sobic001G442000 Sobic001G370800--Sobic002G309300 Sobic009G088300 Sobic009G088300 Sobic001G370800--Sobic009G088300 Sobic001G370800--Sobic004G218400 Sobic001G370800--Sobic006G255200 Sobic001G370800--Sobic003G263900 Sobic006G249600--Sobic001G212900 Sobic002G398600 Sobic002G398600 Sobic006G249600--Sobic002G398600 Sobic006G249600--Sobic002G187900 Sobic006G249600--Sobic003G253700 Sobic006G249600--Sobic003G155000 Sobic006G249600--Sobic003G263900 Sobic006G249600--Sobic001G109400 Sobic006G249600--Sobic004G173200 Sobic006G249600--Sobic006G157450 Sobic009G094200--Sobic008G142200 Sobic009G094200--Sobic001G001800 Sobic004G227700 Sobic004G227700 Sobic009G094200--Sobic004G227700 Sobic009G094200--Sobic003G263900 Sobic004G082600 Sobic004G082600 Sobic009G094200--Sobic004G082600 Sobic001G190900 Sobic001G190900 Sobic009G094200--Sobic001G190900 Sobic007G141900 Sobic007G141900 Sobic009G094200--Sobic007G141900 Sobic009G094200--Sobic001G038700 Sobic009G094200--Sobic009G026600
Octagon: transcription factors


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