Gene annotation
Transcriptome id Sobic.007G182101.1
Synonym SbTCP17;SbTCP17
Functional annotation "TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)." (PubMedID : 27917941)
"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)" (PubMedID : 28383054)
UniProt A0A1Z5RAI3
Pfam PF03634
Panther DB PTHR31072 PTHR31072:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G45680 : TCP family transcription factor
RAP-DB (Rice) LOC_Os08g43160.1 : TCP family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a005363
Brachypodium KQK01934 , KQJ91115
Barley HORVU5Hr1G117990.1 , HORVU7Hr1G036940.1 , HORVU7Hr1G036940.2 , HORVU5Hr1G080210.2 , HORVU5Hr1G080210.1
Wheat TraesCS4A02G355900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G047600 expressed protein -
2 Sobic.001G284425 - -
3 Sobic.003G385000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine protein kinase, putative, expressed -
4 Sobic.001G359800 transcription regulator, putative, expressed -
5 Sobic.004G098800 - -
6 Sobic.006G128200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Kinase(PubMedID : 30367619)@protein kinase, putative, expressed -
7 Sobic.008G058200 pectate lyase family protein, expressed K01728: pectate lyase
8 Sobic.010G134700 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@peptidyl-prolyl isomerase, putative, expressed K09571: FK506-binding protein 4/5
9 Sobic.004G268900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.005G078300 OsFBX430 - F-box domain containing protein, expressed -
11 Sobic.005G046001 - -
12 Sobic.008G041450 - -
13 Sobic.003G392275 - -
14 Sobic.004G032600 - -
15 Sobic.006G188600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fringe-related protein, putative, expressed -
16 Sobic.010G090700 expressed protein -
17 Sobic.009G158000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@growth regulator related protein, putative, expressed -
18 Sobic.010G006800 auxin-induced protein 5NG4, putative, expressed -
19 Sobic.003G141600 - -
20 Sobic.002G102300 - -


Gene co-expression network
sample Sobic007G182101 Sobic007G182101 Sobic008G047600 Sobic008G047600 Sobic007G182101--Sobic008G047600 Sobic001G284425 Sobic001G284425 Sobic007G182101--Sobic001G284425 Sobic003G385000 Sobic003G385000 Sobic007G182101--Sobic003G385000 Sobic001G359800 Sobic001G359800 Sobic007G182101--Sobic001G359800 Sobic004G098800 Sobic004G098800 Sobic007G182101--Sobic004G098800 Sobic006G128200 Sobic006G128200 Sobic007G182101--Sobic006G128200 Sobic008G058200 Sobic008G058200 Sobic007G182101--Sobic008G058200 Sobic010G134700 Sobic010G134700 Sobic007G182101--Sobic010G134700 Sobic004G268900 Sobic004G268900 Sobic007G182101--Sobic004G268900 Sobic003G335300 Sobic003G335300 Sobic008G047600--Sobic003G335300 Sobic008G047600--Sobic006G128200 Sobic002G428600 Sobic002G428600 Sobic008G047600--Sobic002G428600 Sobic001G499600 Sobic001G499600 Sobic008G047600--Sobic001G499600 Sobic006G230400 Sobic006G230400 Sobic008G047600--Sobic006G230400 Sobic006G118400 Sobic006G118400 Sobic008G047600--Sobic006G118400 Sobic008G129000 Sobic008G129000 Sobic008G047600--Sobic008G129000 Sobic001G482800 Sobic001G482800 Sobic008G047600--Sobic001G482800 Sobic008G047600--Sobic008G058200 Sobic001G284425--Sobic003G385000 Sobic001G284400 Sobic001G284400 Sobic001G284425--Sobic001G284400 Sobic002G373600 Sobic002G373600 Sobic001G284425--Sobic002G373600 Sobic006G199700 Sobic006G199700 Sobic001G284425--Sobic006G199700 Sobic006G069200 Sobic006G069200 Sobic001G284425--Sobic006G069200 Sobic010G076700 Sobic010G076700 Sobic001G284425--Sobic010G076700 Sobic003G223800 Sobic003G223800 Sobic001G284425--Sobic003G223800 Sobic001G075800 Sobic001G075800 Sobic001G284425--Sobic001G075800 Sobic001G284425--Sobic010G134700 Sobic003G385000--Sobic010G134700 Sobic003G385000--Sobic004G098800 Sobic003G385000--Sobic001G284425 Sobic008G041450 Sobic008G041450 Sobic003G385000--Sobic008G041450 Sobic003G385000--Sobic002G373600 Sobic003G385000--Sobic001G284400 Sobic007G070500 Sobic007G070500 Sobic003G385000--Sobic007G070500 Sobic003G385000--Sobic003G223800 Sobic004G178700 Sobic004G178700 Sobic003G385000--Sobic004G178700 Sobic001G359800--Sobic007G182101 Sobic007G224300 Sobic007G224300 Sobic001G359800--Sobic007G224300 Sobic003G055000 Sobic003G055000 Sobic001G359800--Sobic003G055000 Sobic005G208900 Sobic005G208900 Sobic001G359800--Sobic005G208900 Sobic007G139900 Sobic007G139900 Sobic001G359800--Sobic007G139900 Sobic001G243732 Sobic001G243732 Sobic001G359800--Sobic001G243732 Sobic004G323600 Sobic004G323600 Sobic001G359800--Sobic004G323600 Sobic009G182500 Sobic009G182500 Sobic001G359800--Sobic009G182500 Sobic001G359800--Sobic004G268900 Sobic004G098800--Sobic010G134700 Sobic004G098800--Sobic008G041450 Sobic003G392275 Sobic003G392275 Sobic004G098800--Sobic003G392275 Sobic004G098800--Sobic003G385000 Sobic010G006800 Sobic010G006800 Sobic004G098800--Sobic010G006800 Sobic003G141600 Sobic003G141600 Sobic004G098800--Sobic003G141600 Sobic001G490950 Sobic001G490950 Sobic004G098800--Sobic001G490950 Sobic002G102300 Sobic002G102300 Sobic004G098800--Sobic002G102300 Sobic004G032600 Sobic004G032600 Sobic004G098800--Sobic004G032600 Sobic006G128200--Sobic003G335300 Sobic003G013700 Sobic003G013700 Sobic006G128200--Sobic003G013700 Sobic002G420600 Sobic002G420600 Sobic006G128200--Sobic002G420600 Sobic001G073700 Sobic001G073700 Sobic006G128200--Sobic001G073700 Sobic001G192700 Sobic001G192700 Sobic006G128200--Sobic001G192700 Sobic006G050100 Sobic006G050100 Sobic006G128200--Sobic006G050100 Sobic010G253400 Sobic010G253400 Sobic006G128200--Sobic010G253400 Sobic003G040700 Sobic003G040700 Sobic006G128200--Sobic003G040700 Sobic010G028900 Sobic010G028900 Sobic006G128200--Sobic010G028900 Sobic001G023600 Sobic001G023600 Sobic008G058200--Sobic001G023600 Sobic009G218000 Sobic009G218000 Sobic008G058200--Sobic009G218000 Sobic003G200000 Sobic003G200000 Sobic008G058200--Sobic003G200000 Sobic006G167100 Sobic006G167100 Sobic008G058200--Sobic006G167100 Sobic005G045800 Sobic005G045800 Sobic008G058200--Sobic005G045800 Sobic009G158000 Sobic009G158000 Sobic008G058200--Sobic009G158000 Sobic009G054400 Sobic009G054400 Sobic008G058200--Sobic009G054400 Sobic007G118050 Sobic007G118050 Sobic008G058200--Sobic007G118050 Sobic001G414100 Sobic001G414100 Sobic008G058200--Sobic001G414100 Sobic010G134700--Sobic004G098800 Sobic010G134700--Sobic003G385000 Sobic002G368100 Sobic002G368100 Sobic010G134700--Sobic002G368100 Sobic010G134700--Sobic010G006800 Sobic008G141600 Sobic008G141600 Sobic010G134700--Sobic008G141600 Sobic004G074900 Sobic004G074900 Sobic010G134700--Sobic004G074900 Sobic003G238250 Sobic003G238250 Sobic010G134700--Sobic003G238250 Sobic010G134700--Sobic003G392275 Sobic010G134700--Sobic004G178700 Sobic004G268900--Sobic004G323600 Sobic004G065900 Sobic004G065900 Sobic004G268900--Sobic004G065900 Sobic004G187800 Sobic004G187800 Sobic004G268900--Sobic004G187800 Sobic002G207300 Sobic002G207300 Sobic004G268900--Sobic002G207300 Sobic002G294600 Sobic002G294600 Sobic004G268900--Sobic002G294600 Sobic004G086800 Sobic004G086800 Sobic004G268900--Sobic004G086800 Sobic001G287600 Sobic001G287600 Sobic004G268900--Sobic001G287600 Sobic002G185200 Sobic002G185200 Sobic004G268900--Sobic002G185200 Sobic002G080100 Sobic002G080100 Sobic004G268900--Sobic002G080100
Octagon: transcription factors


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