Gene annotation
Transcriptome id Sobic.006G188600.1
Synonym Sb06g026210
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
fringe-related protein, putative, expressed
UniProt C5YEG9
Pfam PF02434
Panther DB PTHR10811 PTHR10811:SF15
NCBI CDD KOG2246; Galactosyltransferases
KEGG Orthology -
Gene Ontology GO:0016757; transferase activity, transferring glycosyl groups GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT5G41460 : Protein of unknown function (DUF604)
RAP-DB (Rice) LOC_Os04g48950.1 : fringe-related protein, putative, expressed
MaizeGDB (Corn) Zm00025a021521 , Zm00025a056731 , Zm00025a001793 , Zm00025a010091
Brachypodium KQJ84180 , KQK00787 , PNT78287 , PNT69237
Barley HORVU1Hr1G049710.2 , HORVU1Hr1G049710.3
Wheat TraesCS6B02G266700 , TraesCS4D02G340600 , TraesCS6A02G258700 , TraesCS5A02G514600 , TraesCS2B02G414100 , TraesCS4B02G345500 , TraesCS6D02G239900 , TraesCS2A02G395800 , TraesCS2D02G393500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G057600 expressed protein -
2 Sobic.001G153500 glutaredoxin, putative, expressed -
3 Sobic.006G218200 expressed protein -
4 Sobic.010G263400 expressed protein -
5 Sobic.004G014500 THION20 - Plant thionin family protein precursor, putative, expressed -
6 Sobic.001G186700 expressed protein -
7 Sobic.005G170200 OsFBDUF55 - F-box and DUF domain containing protein, expressed -
8 Sobic.003G072700 expressed protein -
9 Sobic.009G180600 CAMK_CAMK_like.4 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
10 Sobic.010G086100 SKIP/SNW domain containing protein, expressed K06063: SNW1, SKIIP, SNW domain-containing protein 1
11 Sobic.010G181701 - -
12 Sobic.010G005100 ethylene-responsive element-binding protein, putative, expressed -
13 Sobic.010G028900 CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
14 Sobic.001G027700 expressed protein -
15 Sobic.003G048400 - -
16 Sobic.001G506400 expressed protein -
17 Sobic.006G171600 ZOS4-10 - C2H2 zinc finger protein, expressed -
18 Sobic.004G071700 expressed protein -
19 Sobic.008G188800 ankyrin repeat domain-containing protein, putative, expressed -
20 Sobic.002G061500 OsFBX237 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic006G188600 Sobic006G188600 Sobic010G057600 Sobic010G057600 Sobic006G188600--Sobic010G057600 Sobic001G153500 Sobic001G153500 Sobic006G188600--Sobic001G153500 Sobic006G218200 Sobic006G218200 Sobic006G188600--Sobic006G218200 Sobic010G263400 Sobic010G263400 Sobic006G188600--Sobic010G263400 Sobic004G014500 Sobic004G014500 Sobic006G188600--Sobic004G014500 Sobic001G186700 Sobic001G186700 Sobic006G188600--Sobic001G186700 Sobic005G170200 Sobic005G170200 Sobic006G188600--Sobic005G170200 Sobic003G072700 Sobic003G072700 Sobic006G188600--Sobic003G072700 Sobic009G180600 Sobic009G180600 Sobic006G188600--Sobic009G180600 Sobic003G048400 Sobic003G048400 Sobic010G057600--Sobic003G048400 Sobic010G057600--Sobic009G180600 Sobic001G207900 Sobic001G207900 Sobic010G057600--Sobic001G207900 Sobic003G379000 Sobic003G379000 Sobic010G057600--Sobic003G379000 Sobic004G355750 Sobic004G355750 Sobic010G057600--Sobic004G355750 Sobic001G442400 Sobic001G442400 Sobic010G057600--Sobic001G442400 Sobic004G336800 Sobic004G336800 Sobic010G057600--Sobic004G336800 Sobic010G057600--Sobic004G014500 Sobic005G181500 Sobic005G181500 Sobic010G057600--Sobic005G181500 Sobic003G256300 Sobic003G256300 Sobic001G153500--Sobic003G256300 Sobic001G153500--Sobic001G207900 Sobic002G061500 Sobic002G061500 Sobic001G153500--Sobic002G061500 Sobic001G153500--Sobic009G180600 Sobic010G215400 Sobic010G215400 Sobic001G153500--Sobic010G215400 Sobic004G071700 Sobic004G071700 Sobic001G153500--Sobic004G071700 Sobic004G008500 Sobic004G008500 Sobic001G153500--Sobic004G008500 Sobic001G153500--Sobic004G336800 Sobic004G264100 Sobic004G264100 Sobic001G153500--Sobic004G264100 Sobic009G037700 Sobic009G037700 Sobic006G218200--Sobic009G037700 Sobic008G188800 Sobic008G188800 Sobic006G218200--Sobic008G188800 Sobic008G070600 Sobic008G070600 Sobic006G218200--Sobic008G070600 Sobic001G457500 Sobic001G457500 Sobic006G218200--Sobic001G457500 Sobic006G219801 Sobic006G219801 Sobic006G218200--Sobic006G219801 Sobic007G144100 Sobic007G144100 Sobic006G218200--Sobic007G144100 Sobic010G058300 Sobic010G058300 Sobic006G218200--Sobic010G058300 Sobic009G047066 Sobic009G047066 Sobic006G218200--Sobic009G047066 Sobic006G218200--Sobic003G072700 Sobic007G060100 Sobic007G060100 Sobic010G263400--Sobic007G060100 Sobic003G258100 Sobic003G258100 Sobic010G263400--Sobic003G258100 Sobic010G263400--Sobic003G072700 Sobic010G263400--Sobic007G144100 Sobic004G168900 Sobic004G168900 Sobic010G263400--Sobic004G168900 Sobic002G299500 Sobic002G299500 Sobic010G263400--Sobic002G299500 Sobic003G217800 Sobic003G217800 Sobic010G263400--Sobic003G217800 Sobic004G038400 Sobic004G038400 Sobic010G263400--Sobic004G038400 Sobic004G250800 Sobic004G250800 Sobic010G263400--Sobic004G250800 Sobic006G171600 Sobic006G171600 Sobic004G014500--Sobic006G171600 Sobic010G142650 Sobic010G142650 Sobic004G014500--Sobic010G142650 Sobic004G014500--Sobic004G250800 Sobic004G014500--Sobic001G442400 Sobic009G202000 Sobic009G202000 Sobic004G014500--Sobic009G202000 Sobic010G003200 Sobic010G003200 Sobic004G014500--Sobic010G003200 Sobic006G115700 Sobic006G115700 Sobic004G014500--Sobic006G115700 Sobic005G110160 Sobic005G110160 Sobic004G014500--Sobic005G110160 Sobic004G014500--Sobic001G207900 Sobic001G144150 Sobic001G144150 Sobic001G186700--Sobic001G144150 Sobic003G145250 Sobic003G145250 Sobic001G186700--Sobic003G145250 Sobic009G030001 Sobic009G030001 Sobic001G186700--Sobic009G030001 Sobic005G191200 Sobic005G191200 Sobic001G186700--Sobic005G191200 Sobic005G199800 Sobic005G199800 Sobic001G186700--Sobic005G199800 Sobic003G075300 Sobic003G075300 Sobic001G186700--Sobic003G075300 Sobic003G191300 Sobic003G191300 Sobic001G186700--Sobic003G191300 Sobic010G012700 Sobic010G012700 Sobic001G186700--Sobic010G012700 Sobic005G041450 Sobic005G041450 Sobic001G186700--Sobic005G041450 Sobic005G170200--Sobic001G144150 Sobic010G263700 Sobic010G263700 Sobic005G170200--Sobic010G263700 Sobic005G170200--Sobic001G186700 Sobic001G034200 Sobic001G034200 Sobic005G170200--Sobic001G034200 Sobic005G074300 Sobic005G074300 Sobic005G170200--Sobic005G074300 Sobic005G170200--Sobic004G038400 Sobic003G005700 Sobic003G005700 Sobic005G170200--Sobic003G005700 Sobic005G170200--Sobic003G048400 Sobic006G070564 Sobic006G070564 Sobic005G170200--Sobic006G070564 Sobic003G072700--Sobic010G263400 Sobic003G072700--Sobic004G014500 Sobic006G152700 Sobic006G152700 Sobic003G072700--Sobic006G152700 Sobic003G072700--Sobic003G379000 Sobic007G141600 Sobic007G141600 Sobic003G072700--Sobic007G141600 Sobic003G072700--Sobic003G258100 Sobic003G072700--Sobic002G299500 Sobic006G115900 Sobic006G115900 Sobic003G072700--Sobic006G115900 Sobic007G146200 Sobic007G146200 Sobic003G072700--Sobic007G146200 Sobic009G180600--Sobic004G008500 Sobic004G289100 Sobic004G289100 Sobic009G180600--Sobic004G289100 Sobic001G152800 Sobic001G152800 Sobic009G180600--Sobic001G152800 Sobic001G445400 Sobic001G445400 Sobic009G180600--Sobic001G445400 Sobic006G203800 Sobic006G203800 Sobic009G180600--Sobic006G203800 Sobic007G166500 Sobic007G166500 Sobic009G180600--Sobic007G166500 Sobic009G180600--Sobic004G336800 Sobic010G261900 Sobic010G261900 Sobic009G180600--Sobic010G261900 Sobic009G180600--Sobic001G207900
Octagon: transcription factors


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