Gene annotation
Transcriptome id Sobic.007G192900.1
Synonym AP1, AGL7, Sb07g026180
Functional annotation OsMADS37 - MADS-box family gene with MIKC* type-box, expressed
UniProt A0A1B6PIN3
Pfam PF00319
Panther DB PTHR11945 PTHR11945:SF239
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003677; DNA binding


Orthologs (automatic annotation)
TAIR AT1G69120 : K-box region and MADS-box transcription factor family protein
RAP-DB (Rice) LOC_Os08g41960.1 : OsMADS37 - MADS-box family gene with MIKC* type-box, expressed
MaizeGDB (Corn) Zm00025a021527 , Zm00025a023522 , Zm00025a005268 , Zm00025a032331 , Zm00025a026241
Brachypodium KQK00790 , PNT73501 , PNT73500 , KQK11233
Barley HORVU3Hr1G095200.17 , HORVU4Hr1G085370.2 , HORVU4Hr1G085370.1 , HORVU3Hr1G095200.19 , HORVU3Hr1G095200.18 , HORVU3Hr1G095200.16 , HORVU3Hr1G095090.1 , HORVU3Hr1G095090.2 , HORVU3Hr1G095090.3 , HORVU6Hr1G066140.9 , HORVU6Hr1G066140.8 , HORVU6Hr1G066140.1 , HORVU6Hr1G066140.3 , HORVU6Hr1G066140.2 , HORVU6Hr1G066140.5 , HORVU6Hr1G066140.4 , HORVU6Hr1G066140.7 , HORVU6Hr1G066140.6 , HORVU3Hr1G095200.15 , HORVU4Hr1G085450.2 , HORVU4Hr1G085450.3 , HORVU4Hr1G085450.1 , HORVU7Hr1G054220.4 , HORVU7Hr1G054220.5 , HORVU5Hr1G076400.4 , HORVU5Hr1G076400.5 , HORVU5Hr1G076400.2 , HORVU5Hr1G076400.3 , HORVU5Hr1G076400.1 , HORVU3Hr1G095090.4 , HORVU3Hr1G095090.5 , HORVU3Hr1G095090.6 , HORVU3Hr1G095200.4 , HORVU3Hr1G095200.20 , HORVU3Hr1G095200.21 , HORVU3Hr1G095240.1 , HORVU3Hr1G095240.3 , HORVU3Hr1G095240.2 , HORVU3Hr1G095240.5 , HORVU3Hr1G095240.4 , HORVU3Hr1G095240.7 , HORVU3Hr1G095240.6 , HORVU3Hr1G095240.9 , HORVU3Hr1G095240.8 , HORVU7Hr1G054220.1 , HORVU7Hr1G054220.2 , HORVU7Hr1G054220.3 , HORVU3Hr1G095080.7 , HORVU3Hr1G095080.6 , HORVU3Hr1G095080.5 , HORVU3Hr1G095080.4 , HORVU3Hr1G095080.3 , HORVU3Hr1G095080.2 , HORVU3Hr1G095080.1
Wheat TraesCS3D02G427900 , TraesCS4D02G346300 , TraesCS6B02G286400 , TraesCS6B02G286400 , TraesCS6B02G286400 , TraesCS3B02G469700 , TraesCS7D02G261600 , TraesCS3A02G432900 , TraesCS4B02G351500 , TraesCS7B02G158600 , TraesCS3D02G428000 , TraesCS3B02G470000 , TraesCS6D02G240200 , TraesCS6D02G240200 , TraesCS6D02G240200 , TraesCS3D02G427700 , TraesCS3A02G434700 , TraesCS6A02G259000 , TraesCS6A02G259000 , TraesCS6A02G259000 , TraesCS5A02G520200 , TraesCS3A02G435000 , TraesCS3A02G434400 , TraesCS7D02G261600 , TraesCS3A02G434900 , TraesCS7A02G260600 , TraesCS7A02G260600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G147700 expressed protein -
2 Sobic.002G180100 hypersensitive-induced response protein, putative, expressed -
3 Sobic.007G052201 - K10666: E3 ubiquitin-protein ligase RNF5
4 Sobic.005G122000 LGC1, putative, expressed -
5 Sobic.001G221601 - -
6 Sobic.003G031600 expressed protein -
7 Sobic.002G181800 HOTHEAD precursor, putative, expressed K15403: ACE, fatty acid omega-hydroxy dehydrogenase
8 Sobic.007G046800 DEFL43 - Defensin and Defensin-like DEFL family, expressed -
9 Sobic.009G166400 MCM8 - Putative minichromosome maintenance MCM family subunit 8, expressed K10737: DNA helicase MCM8
10 Sobic.006G137300 methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
11 Sobic.007G136500 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
12 Sobic.001G455300 ZOS3-05 - C2H2 zinc finger protein, expressed -
13 Sobic.005G168200 -(PubMedID : 34525227)@expressed protein K17911: beta-carotene isomerase
14 Sobic.008G017600 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@no apical meristem protein, putative, expressed -
15 Sobic.003G013300 expressed protein -
16 Sobic.006G228833 - -
17 Sobic.004G253300 helix-loop-helix DNA-binding domain containing protein, expressed -
18 Sobic.004G073800 STRUBBELIG-RECEPTOR FAMILY 7 precursor, putative, expressed -
19 Sobic.009G178650 - -
20 Sobic.003G092000 expressed protein K04506: E3 ubiquitin-protein ligase SIAH1


Gene co-expression network
sample Sobic007G192900 Sobic007G192900 Sobic009G147700 Sobic009G147700 Sobic007G192900--Sobic009G147700 Sobic002G180100 Sobic002G180100 Sobic007G192900--Sobic002G180100 Sobic007G052201 Sobic007G052201 Sobic007G192900--Sobic007G052201 Sobic005G122000 Sobic005G122000 Sobic007G192900--Sobic005G122000 Sobic001G221601 Sobic001G221601 Sobic007G192900--Sobic001G221601 Sobic003G031600 Sobic003G031600 Sobic007G192900--Sobic003G031600 Sobic002G181800 Sobic002G181800 Sobic007G192900--Sobic002G181800 Sobic007G046800 Sobic007G046800 Sobic007G192900--Sobic007G046800 Sobic009G166400 Sobic009G166400 Sobic007G192900--Sobic009G166400 Sobic001G100300 Sobic001G100300 Sobic009G147700--Sobic001G100300 Sobic009G173700 Sobic009G173700 Sobic009G147700--Sobic009G173700 Sobic006G228833 Sobic006G228833 Sobic009G147700--Sobic006G228833 Sobic009G235400 Sobic009G235400 Sobic009G147700--Sobic009G235400 Sobic006G235801 Sobic006G235801 Sobic009G147700--Sobic006G235801 Sobic006G045601 Sobic006G045601 Sobic009G147700--Sobic006G045601 Sobic007G183600 Sobic007G183600 Sobic009G147700--Sobic007G183600 Sobic002G297100 Sobic002G297100 Sobic009G147700--Sobic002G297100 Sobic003G341900 Sobic003G341900 Sobic009G147700--Sobic003G341900 Sobic003G243000 Sobic003G243000 Sobic002G180100--Sobic003G243000 Sobic002G306500 Sobic002G306500 Sobic002G180100--Sobic002G306500 Sobic004G299200 Sobic004G299200 Sobic002G180100--Sobic004G299200 Sobic002G180100--Sobic007G192900 Sobic001G497800 Sobic001G497800 Sobic002G180100--Sobic001G497800 Sobic003G092000 Sobic003G092000 Sobic002G180100--Sobic003G092000 Sobic005G141200 Sobic005G141200 Sobic002G180100--Sobic005G141200 Sobic003G156700 Sobic003G156700 Sobic002G180100--Sobic003G156700 Sobic009G211300 Sobic009G211300 Sobic002G180100--Sobic009G211300 Sobic003G379450 Sobic003G379450 Sobic007G052201--Sobic003G379450 Sobic007G052201--Sobic007G046800 Sobic003G139600 Sobic003G139600 Sobic007G052201--Sobic003G139600 Sobic003G416200 Sobic003G416200 Sobic007G052201--Sobic003G416200 Sobic004G282966 Sobic004G282966 Sobic007G052201--Sobic004G282966 Sobic004G207800 Sobic004G207800 Sobic007G052201--Sobic004G207800 Sobic002G087700 Sobic002G087700 Sobic007G052201--Sobic002G087700 Sobic002G380550 Sobic002G380550 Sobic007G052201--Sobic002G380550 Sobic003G267200 Sobic003G267200 Sobic007G052201--Sobic003G267200 Sobic003G116200 Sobic003G116200 Sobic005G122000--Sobic003G116200 Sobic010G246800 Sobic010G246800 Sobic005G122000--Sobic010G246800 Sobic010G120900 Sobic010G120900 Sobic005G122000--Sobic010G120900 Sobic001G314350 Sobic001G314350 Sobic005G122000--Sobic001G314350 Sobic010G214150 Sobic010G214150 Sobic005G122000--Sobic010G214150 Sobic003G192500 Sobic003G192500 Sobic005G122000--Sobic003G192500 Sobic001G308350 Sobic001G308350 Sobic005G122000--Sobic001G308350 Sobic001G143850 Sobic001G143850 Sobic005G122000--Sobic001G143850 Sobic001G505066 Sobic001G505066 Sobic005G122000--Sobic001G505066 Sobic004G312400 Sobic004G312400 Sobic001G221601--Sobic004G312400 Sobic002G390700 Sobic002G390700 Sobic001G221601--Sobic002G390700 Sobic004G064700 Sobic004G064700 Sobic001G221601--Sobic004G064700 Sobic009G166650 Sobic009G166650 Sobic001G221601--Sobic009G166650 Sobic004G073800 Sobic004G073800 Sobic001G221601--Sobic004G073800 Sobic003G107000 Sobic003G107000 Sobic001G221601--Sobic003G107000 Sobic010G213000 Sobic010G213000 Sobic001G221601--Sobic010G213000 Sobic001G088400 Sobic001G088400 Sobic001G221601--Sobic001G088400 Sobic001G088000 Sobic001G088000 Sobic001G221601--Sobic001G088000 Sobic003G066600 Sobic003G066600 Sobic003G031600--Sobic003G066600 Sobic001G538200 Sobic001G538200 Sobic003G031600--Sobic001G538200 Sobic004G285300 Sobic004G285300 Sobic003G031600--Sobic004G285300 Sobic008G130350 Sobic008G130350 Sobic003G031600--Sobic008G130350 Sobic010G081300 Sobic010G081300 Sobic003G031600--Sobic010G081300 Sobic004G108300 Sobic004G108300 Sobic003G031600--Sobic004G108300 Sobic010G052450 Sobic010G052450 Sobic003G031600--Sobic010G052450 Sobic004G015050 Sobic004G015050 Sobic003G031600--Sobic004G015050 Sobic005G125100 Sobic005G125100 Sobic003G031600--Sobic005G125100 Sobic002G038500 Sobic002G038500 Sobic002G181800--Sobic002G038500 Sobic006G137300 Sobic006G137300 Sobic002G181800--Sobic006G137300 Sobic007G067900 Sobic007G067900 Sobic002G181800--Sobic007G067900 Sobic002G181800--Sobic009G147700 Sobic010G206400 Sobic010G206400 Sobic002G181800--Sobic010G206400 Sobic009G112800 Sobic009G112800 Sobic002G181800--Sobic009G112800 Sobic002G181800--Sobic001G221601 Sobic002G181800--Sobic004G073800 Sobic007G122400 Sobic007G122400 Sobic002G181800--Sobic007G122400 Sobic002G057800 Sobic002G057800 Sobic007G046800--Sobic002G057800 Sobic010G064800 Sobic010G064800 Sobic007G046800--Sobic010G064800 Sobic010G059400 Sobic010G059400 Sobic007G046800--Sobic010G059400 Sobic005G097201 Sobic005G097201 Sobic007G046800--Sobic005G097201 Sobic005G189600 Sobic005G189600 Sobic007G046800--Sobic005G189600 Sobic007G046800--Sobic004G015050 Sobic004G015150 Sobic004G015150 Sobic007G046800--Sobic004G015150 Sobic007G046800--Sobic004G285300 Sobic002G080500 Sobic002G080500 Sobic007G046800--Sobic002G080500 Sobic009G166400--Sobic009G166650 Sobic009G097500 Sobic009G097500 Sobic009G166400--Sobic009G097500 Sobic002G305900 Sobic002G305900 Sobic009G166400--Sobic002G305900 Sobic004G272950 Sobic004G272950 Sobic009G166400--Sobic004G272950 SobicK031300 SobicK031300 Sobic009G166400--SobicK031300 SobicK043600 SobicK043600 Sobic009G166400--SobicK043600 Sobic001G455300 Sobic001G455300 Sobic009G166400--Sobic001G455300 Sobic003G168600 Sobic003G168600 Sobic009G166400--Sobic003G168600 Sobic009G209650 Sobic009G209650 Sobic009G166400--Sobic009G209650
Octagon: transcription factors


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