Gene annotation
Transcriptome id Sobic.007G226700.1
Synonym DIT2.1 ;DIT2, DCT, DIT2.1, DCT, Sb07g029165
Functional annotation - (PubMedID : 26976818)
dicarboxylate transporter 4 (PubMedID : 27016024)
citrate transporter, putative, expressed
UniProt C5YJQ5
Pfam PF03600
Panther DB PTHR10283 PTHR10283:SF106
NCBI CDD -
KEGG Orthology K03319; divalent anion:Na+ symporter, DASS family
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT5G64290 : dicarboxylate transport 2.1
RAP-DB (Rice) LOC_Os08g37600.1 : citrate transporter, putative, expressed
MaizeGDB (Corn) Zm00025a014127 , Zm00025a004917
Brachypodium KQJ90598 , KQJ98711
Barley HORVU5Hr1G070230.1 , HORVU5Hr1G070230.2 , HORVU7Hr1G063220.2 , HORVU7Hr1G063220.3 , HORVU7Hr1G063220.1
Wheat TraesCS7D02G283000 , TraesCS7A02G285000 , TraesCS5B02G246600 , TraesCS5D02G256100 , TraesCS7B02G199700 , TraesCS5A02G248900
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G148950 - -
2 Sobic.010G166600 amino acid transporter, putative, expressed -
3 Sobic.005G031700 phosphatidylinositol-4-phosphate 5-kinase, putative, expressed K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
4 Sobic.006G136700 GPI-anchored protein, putative, expressed -
5 Sobic.001G024300 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
6 Sobic.009G116100 conserved hypothetical protein -
7 Sobic.001G332200 cysteine proteinase EP-B 1 precursor, putative, expressed -
8 Sobic.002G157900 - -
9 Sobic.001G511100 expressed protein -
10 Sobic.002G417401 - -
11 Sobic.002G091300 pectinesterase inhibitor domain containing protein, expressed -
12 Sobic.003G009600 POEI21 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
13 Sobic.002G282600 copper methylamine oxidase precursor, putative, expressed K00276: AOC3, AOC2, primary-amine oxidase
14 Sobic.004G147700 pectinesterase inhibitor domain containing protein, putative, expressed -
15 Sobic.009G090400 - -
16 Sobic.007G222200 - -
17 Sobic.004G131400 DEF7 - Defensin and Defensin-like DEFL family, expressed -
18 Sobic.001G479700 leucine-rich repeat family protein, putative, expressed -
19 Sobic.010G056500 - -
20 Sobic.002G427500 pectinesterase, putative, expressed K01051: pectinesterase


Gene co-expression network
sample Sobic007G226700 Sobic007G226700 Sobic005G148950 Sobic005G148950 Sobic007G226700--Sobic005G148950 Sobic010G166600 Sobic010G166600 Sobic007G226700--Sobic010G166600 Sobic005G031700 Sobic005G031700 Sobic007G226700--Sobic005G031700 Sobic006G136700 Sobic006G136700 Sobic007G226700--Sobic006G136700 Sobic001G024300 Sobic001G024300 Sobic007G226700--Sobic001G024300 Sobic009G116100 Sobic009G116100 Sobic007G226700--Sobic009G116100 Sobic001G332200 Sobic001G332200 Sobic007G226700--Sobic001G332200 Sobic002G157900 Sobic002G157900 Sobic007G226700--Sobic002G157900 Sobic001G511100 Sobic001G511100 Sobic007G226700--Sobic001G511100 Sobic005G148950--Sobic002G157900 Sobic009G090400 Sobic009G090400 Sobic005G148950--Sobic009G090400 Sobic005G122100 Sobic005G122100 Sobic005G148950--Sobic005G122100 Sobic007G222200 Sobic007G222200 Sobic005G148950--Sobic007G222200 Sobic005G148950--Sobic001G024300 Sobic005G148950--Sobic006G136700 Sobic005G148950--Sobic001G332200 Sobic002G417401 Sobic002G417401 Sobic005G148950--Sobic002G417401 Sobic005G148950--Sobic009G116100 Sobic010G166600--Sobic002G157900 Sobic010G166600--Sobic001G332200 Sobic010G166600--Sobic006G136700 Sobic010G166600--Sobic009G090400 Sobic010G166600--Sobic002G417401 Sobic010G166600--Sobic001G024300 Sobic010G166600--Sobic007G222200 Sobic010G166600--Sobic009G116100 Sobic009G089200 Sobic009G089200 Sobic010G166600--Sobic009G089200 Sobic010G230200 Sobic010G230200 Sobic005G031700--Sobic010G230200 Sobic005G031700--Sobic001G511100 Sobic008G043400 Sobic008G043400 Sobic005G031700--Sobic008G043400 Sobic003G027300 Sobic003G027300 Sobic005G031700--Sobic003G027300 Sobic004G147700 Sobic004G147700 Sobic005G031700--Sobic004G147700 Sobic005G031700--Sobic009G116100 Sobic004G318300 Sobic004G318300 Sobic005G031700--Sobic004G318300 Sobic002G091300 Sobic002G091300 Sobic005G031700--Sobic002G091300 Sobic002G282600 Sobic002G282600 Sobic005G031700--Sobic002G282600 Sobic006G136700--Sobic001G332200 Sobic006G136700--Sobic001G024300 Sobic006G136700--Sobic009G116100 Sobic006G136700--Sobic002G157900 Sobic006G136700--Sobic002G417401 Sobic006G136700--Sobic009G090400 Sobic004G131400 Sobic004G131400 Sobic006G136700--Sobic004G131400 Sobic003G009600 Sobic003G009600 Sobic006G136700--Sobic003G009600 Sobic006G136700--Sobic007G222200 Sobic001G024300--Sobic009G116100 Sobic001G024300--Sobic006G136700 Sobic001G024300--Sobic003G009600 Sobic001G024300--Sobic002G157900 Sobic001G024300--Sobic007G222200 Sobic001G024300--Sobic002G417401 Sobic001G024300--Sobic009G090400 Sobic001G024300--Sobic001G332200 Sobic009G089000 Sobic009G089000 Sobic001G024300--Sobic009G089000 Sobic009G116100--Sobic001G024300 Sobic009G116100--Sobic006G136700 Sobic009G116100--Sobic003G009600 Sobic009G116100--Sobic001G332200 Sobic009G116100--Sobic002G091300 Sobic009G116100--Sobic002G157900 Sobic009G116100--Sobic002G417401 Sobic009G116100--Sobic002G282600 Sobic009G116100--Sobic009G089000 Sobic001G332200--Sobic006G136700 Sobic001G332200--Sobic002G157900 Sobic001G332200--Sobic001G024300 Sobic001G332200--Sobic004G131400 Sobic010G056500 Sobic010G056500 Sobic001G332200--Sobic010G056500 Sobic001G332200--Sobic002G417401 Sobic001G332200--Sobic009G116100 Sobic004G025600 Sobic004G025600 Sobic001G332200--Sobic004G025600 Sobic001G332200--Sobic009G090400 Sobic002G157900--Sobic009G090400 Sobic002G157900--Sobic006G136700 Sobic002G157900--Sobic001G024300 Sobic002G157900--Sobic001G332200 Sobic002G157900--Sobic007G222200 Sobic002G157900--Sobic002G417401 Sobic002G157900--Sobic009G116100 Sobic002G157900--Sobic005G122100 Sobic002G157900--Sobic003G009600 Sobic001G511100--Sobic008G043400 Sobic001G511100--Sobic010G230200 Sobic001G511100--Sobic005G031700 Sobic003G197500 Sobic003G197500 Sobic001G511100--Sobic003G197500 Sobic003G114900 Sobic003G114900 Sobic001G511100--Sobic003G114900 Sobic001G511100--Sobic009G116100 Sobic001G511100--Sobic003G009600 Sobic002G427500 Sobic002G427500 Sobic001G511100--Sobic002G427500 Sobic001G511100--Sobic004G318300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.