Gene annotation
Transcriptome id Sobic.008G027400.1
Synonym rph1-3, Sb08g002410
Functional annotation "a rapidly evolving gene family, termed Rp1/Pi37, which had an effector response that confers resistance to multiple pathogens across species." (PubMedID : 25928459)
rp1, putative, expressed
UniProt A0A1Z5R4M4
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF627
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14460 : LRR and NB-ARC domains-containing disease resistance protein
RAP-DB (Rice) LOC_Os01g57340.1 : rp1, putative, expressed
MaizeGDB (Corn) Zm00025a053792 , Zm00025a053795 , Zm00025a053794 , Zm00025a053796 , Zm00025a053800
Brachypodium PNT72981 , KQK10078 , PNT72980
Barley HORVU1Hr1G083860.1 , HORVU1Hr1G084020.2 , HORVU1Hr1G083870.6 , HORVU7Hr1G001540.44 , HORVU7Hr1G001540.45 , HORVU7Hr1G001540.40 , HORVU7Hr1G001540.41 , HORVU7Hr1G001540.42 , HORVU7Hr1G001540.43 , HORVU3Hr1G076910.14 , HORVU3Hr1G076910.15 , HORVU3Hr1G076910.16 , HORVU3Hr1G076910.10 , HORVU3Hr1G076910.11 , HORVU3Hr1G076910.12 , HORVU3Hr1G076910.13 , HORVU3Hr1G076910.8 , HORVU3Hr1G076910.9 , HORVU3Hr1G076910.6 , HORVU3Hr1G076910.7 , HORVU3Hr1G076910.4 , HORVU3Hr1G076910.5 , HORVU3Hr1G076910.2 , HORVU3Hr1G076910.3 , HORVU3Hr1G076910.1 , HORVU7Hr1G001540.27 , HORVU7Hr1G001540.24 , HORVU7Hr1G001540.26 , HORVU7Hr1G001540.9 , HORVU7Hr1G001540.8 , HORVU7Hr1G001540.3 , HORVU7Hr1G001540.2 , HORVU7Hr1G001540.1 , HORVU7Hr1G001540.7 , HORVU7Hr1G001540.6 , HORVU7Hr1G001540.5 , HORVU7Hr1G001540.4 , HORVU7Hr1G001540.19 , HORVU7Hr1G001540.18 , HORVU7Hr1G001540.13 , HORVU7Hr1G001540.12 , HORVU7Hr1G001540.11 , HORVU7Hr1G001540.10 , HORVU7Hr1G001540.17 , HORVU7Hr1G001540.16 , HORVU7Hr1G001540.15 , HORVU7Hr1G001540.14 , HORVU7Hr1G001670.1 , HORVU7Hr1G001670.2 , HORVU7Hr1G001540.22 , HORVU7Hr1G001540.20 , HORVU7Hr1G001540.21 , HORVU7Hr1G001540.25 , HORVU7Hr1G001540.39 , HORVU7Hr1G001540.38 , HORVU7Hr1G001540.35 , HORVU7Hr1G001540.34 , HORVU7Hr1G001540.37 , HORVU7Hr1G001540.36 , HORVU7Hr1G001540.31 , HORVU7Hr1G001540.30 , HORVU7Hr1G001540.33 , HORVU7Hr1G001540.32 , HORVU7Hr1G001540.23 , HORVU7Hr1G001540.28 , HORVU7Hr1G001540.29
Wheat TraesCS3D02G314300 , TraesCS3D02G314300 , TraesCS3D02G314300 , TraesCS3D02G314300 , TraesCS4A02G475700 , TraesCS4A02G479700 , TraesCS1B02G400800 , TraesCS4A02G478800 , TraesCS2D02G560600 , TraesCS4A02G475900 , TraesCS4A02G475400 , TraesCS7D02G012900 , TraesCS4A02G480300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G027500 rp1, putative, expressed -
2 Sobic.004G202900 Ser/Thr protein phosphatase family protein, putative, expressed -
3 Sobic.004G341600 O-methyltransferase, putative, expressed -
4 Sobic.004G107800 1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase
5 Sobic.009G133900 inosine-uridine preferring nucleoside hydrolase family protein("PubMedID : 26759170,PubMedID : 24597475")@inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed -
6 Sobic.008G076900 expressed protein -
7 Sobic.003G315166 - K13024: PPIP5K, inositol-hexakisphosphate/diphosphoinositol-pentakisphosphate 1-kinase
8 Sobic.004G091500 receptor-like protein kinase precursor, putative, expressed -
9 Sobic.002G284600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSAUR39 - Auxin-responsive SAUR gene family member, expressed -
10 Sobic.008G058400 amino acid transporter, putative, expressed -
11 Sobic.003G363600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@transcription factor, putative, expressed K14431: transcription factor TGA
12 Sobic.001G442800 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
13 Sobic.002G073400 - -
14 Sobic.001G070100 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR1 - Auxin-responsive SAUR gene family member, expressed -
15 Sobic.003G093200 - -
16 Sobic.010G117000 anthocyanin 3-O-beta-glucosyltransferase, putative, expressed -
17 Sobic.003G158100 DUF1399 containing protein, putative, expressed -
18 Sobic.005G054000 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
19 Sobic.004G317401 - -
20 Sobic.008G182500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@thaumatin, putative, expressed -


Gene co-expression network
sample Sobic008G027400 Sobic008G027400 Sobic008G027500 Sobic008G027500 Sobic008G027400--Sobic008G027500 Sobic004G202900 Sobic004G202900 Sobic008G027400--Sobic004G202900 Sobic004G341600 Sobic004G341600 Sobic008G027400--Sobic004G341600 Sobic004G107800 Sobic004G107800 Sobic008G027400--Sobic004G107800 Sobic009G133900 Sobic009G133900 Sobic008G027400--Sobic009G133900 Sobic008G076900 Sobic008G076900 Sobic008G027400--Sobic008G076900 Sobic003G315166 Sobic003G315166 Sobic008G027400--Sobic003G315166 Sobic004G091500 Sobic004G091500 Sobic008G027400--Sobic004G091500 Sobic002G284600 Sobic002G284600 Sobic008G027400--Sobic002G284600 Sobic005G110508 Sobic005G110508 Sobic008G027500--Sobic005G110508 Sobic005G110511 Sobic005G110511 Sobic008G027500--Sobic005G110511 Sobic005G066500 Sobic005G066500 Sobic008G027500--Sobic005G066500 Sobic003G083800 Sobic003G083800 Sobic008G027500--Sobic003G083800 Sobic007G064900 Sobic007G064900 Sobic008G027500--Sobic007G064900 Sobic008G138700 Sobic008G138700 Sobic008G027500--Sobic008G138700 Sobic003G317300 Sobic003G317300 Sobic008G027500--Sobic003G317300 Sobic002G081850 Sobic002G081850 Sobic008G027500--Sobic002G081850 Sobic003G020500 Sobic003G020500 Sobic008G027500--Sobic003G020500 Sobic004G317401 Sobic004G317401 Sobic004G202900--Sobic004G317401 Sobic004G202900--Sobic004G341600 Sobic004G266100 Sobic004G266100 Sobic004G202900--Sobic004G266100 Sobic003G363600 Sobic003G363600 Sobic004G202900--Sobic003G363600 Sobic006G232100 Sobic006G232100 Sobic004G202900--Sobic006G232100 Sobic007G183500 Sobic007G183500 Sobic004G202900--Sobic007G183500 Sobic006G116200 Sobic006G116200 Sobic004G202900--Sobic006G116200 Sobic003G059600 Sobic003G059600 Sobic004G202900--Sobic003G059600 Sobic002G321200 Sobic002G321200 Sobic004G202900--Sobic002G321200 Sobic004G341600--Sobic004G202900 Sobic004G341600--Sobic006G232100 Sobic002G153600 Sobic002G153600 Sobic004G341600--Sobic002G153600 Sobic002G075300 Sobic002G075300 Sobic004G341600--Sobic002G075300 Sobic003G015700 Sobic003G015700 Sobic004G341600--Sobic003G015700 Sobic004G341600--Sobic003G363600 Sobic008G174850 Sobic008G174850 Sobic004G341600--Sobic008G174850 Sobic002G075100 Sobic002G075100 Sobic004G341600--Sobic002G075100 Sobic003G373050 Sobic003G373050 Sobic004G341600--Sobic003G373050 Sobic003G062500 Sobic003G062500 Sobic004G107800--Sobic003G062500 Sobic004G107800--Sobic008G027400 Sobic003G263701 Sobic003G263701 Sobic004G107800--Sobic003G263701 Sobic004G264900 Sobic004G264900 Sobic004G107800--Sobic004G264900 Sobic003G109000 Sobic003G109000 Sobic004G107800--Sobic003G109000 Sobic005G052300 Sobic005G052300 Sobic004G107800--Sobic005G052300 Sobic004G107800--Sobic008G027500 Sobic005G230100 Sobic005G230100 Sobic004G107800--Sobic005G230100 Sobic001G134000 Sobic001G134000 Sobic004G107800--Sobic001G134000 Sobic002G073400 Sobic002G073400 Sobic009G133900--Sobic002G073400 Sobic006G130501 Sobic006G130501 Sobic009G133900--Sobic006G130501 Sobic010G227950 Sobic010G227950 Sobic009G133900--Sobic010G227950 Sobic001G215900 Sobic001G215900 Sobic009G133900--Sobic001G215900 Sobic008G058400 Sobic008G058400 Sobic009G133900--Sobic008G058400 Sobic006G098200 Sobic006G098200 Sobic009G133900--Sobic006G098200 Sobic003G158100 Sobic003G158100 Sobic009G133900--Sobic003G158100 Sobic004G247300 Sobic004G247300 Sobic009G133900--Sobic004G247300 Sobic006G133600 Sobic006G133600 Sobic009G133900--Sobic006G133600 Sobic009G099700 Sobic009G099700 Sobic008G076900--Sobic009G099700 Sobic001G442800 Sobic001G442800 Sobic008G076900--Sobic001G442800 Sobic002G316000 Sobic002G316000 Sobic008G076900--Sobic002G316000 Sobic001G361800 Sobic001G361800 Sobic008G076900--Sobic001G361800 Sobic005G054700 Sobic005G054700 Sobic008G076900--Sobic005G054700 Sobic004G154600 Sobic004G154600 Sobic008G076900--Sobic004G154600 Sobic010G273400 Sobic010G273400 Sobic008G076900--Sobic010G273400 Sobic008G110900 Sobic008G110900 Sobic008G076900--Sobic008G110900 Sobic009G260000 Sobic009G260000 Sobic008G076900--Sobic009G260000 Sobic007G055900 Sobic007G055900 Sobic003G315166--Sobic007G055900 Sobic002G334100 Sobic002G334100 Sobic003G315166--Sobic002G334100 Sobic007G042600 Sobic007G042600 Sobic003G315166--Sobic007G042600 Sobic003G315166--Sobic006G232100 Sobic010G019600 Sobic010G019600 Sobic003G315166--Sobic010G019600 Sobic010G013000 Sobic010G013000 Sobic003G315166--Sobic010G013000 Sobic001G070100 Sobic001G070100 Sobic003G315166--Sobic001G070100 Sobic002G348300 Sobic002G348300 Sobic003G315166--Sobic002G348300 Sobic004G187600 Sobic004G187600 Sobic003G315166--Sobic004G187600 Sobic007G115600 Sobic007G115600 Sobic004G091500--Sobic007G115600 Sobic004G067800 Sobic004G067800 Sobic004G091500--Sobic004G067800 Sobic003G348300 Sobic003G348300 Sobic004G091500--Sobic003G348300 Sobic006G281300 Sobic006G281300 Sobic004G091500--Sobic006G281300 Sobic010G083100 Sobic010G083100 Sobic004G091500--Sobic010G083100 Sobic004G272000 Sobic004G272000 Sobic004G091500--Sobic004G272000 Sobic008G176266 Sobic008G176266 Sobic004G091500--Sobic008G176266 Sobic001G005100 Sobic001G005100 Sobic004G091500--Sobic001G005100 Sobic006G223850 Sobic006G223850 Sobic004G091500--Sobic006G223850 Sobic009G237350 Sobic009G237350 Sobic002G284600--Sobic009G237350 Sobic008G178300 Sobic008G178300 Sobic002G284600--Sobic008G178300 Sobic008G178200 Sobic008G178200 Sobic002G284600--Sobic008G178200 Sobic003G395600 Sobic003G395600 Sobic002G284600--Sobic003G395600 Sobic002G054901 Sobic002G054901 Sobic002G284600--Sobic002G054901 Sobic003G009501 Sobic003G009501 Sobic002G284600--Sobic003G009501 Sobic004G087200 Sobic004G087200 Sobic002G284600--Sobic004G087200 Sobic003G311250 Sobic003G311250 Sobic002G284600--Sobic003G311250 Sobic010G222600 Sobic010G222600 Sobic002G284600--Sobic010G222600
Octagon: transcription factors


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