Gene annotation
Transcriptome id Sobic.004G107800.2,Sobic.004G107800.1
Synonym ATGSL04, gsl04, atgsl4
Functional annotation 1,3-beta-glucan synthase component domain containing protein, expressed
UniProt A0A1Z5RMB1 , A0A194YQ04
Pfam PF04652 PF14288 PF02364 PF14288 PF02364
Panther DB PTHR12741 PTHR12741:SF22
NCBI CDD -
KEGG Orthology K11000; callose synthase
Gene Ontology GO:0016020; membrane GO:0006075(1->3)-beta-D-glucan biosynthetic process GO:00038431,3-beta-D-glucan synthase activity GO:00001481,3-beta-D-glucan synthase complex


Orthologs (automatic annotation)
TAIR AT3G14570 : glucan synthase-like 4
RAP-DB (Rice) LOC_Os02g14900.1 : 1,3-beta-glucan synthase component domain containing protein, expressed
MaizeGDB (Corn) Zm00025a019979
Brachypodium PNT66265 , KQK23865 , KQK23853
Barley HORVU6Hr1G031230.26 , HORVU6Hr1G031200.37 , HORVU6Hr1G031200.34 , HORVU6Hr1G031200.35 , HORVU6Hr1G031200.32 , HORVU6Hr1G031230.23 , HORVU6Hr1G031200.30 , HORVU6Hr1G031200.31 , HORVU6Hr1G031200.38 , HORVU6Hr1G031200.39 , HORVU6Hr1G031200.43 , HORVU6Hr1G031200.42 , HORVU6Hr1G031200.41 , HORVU6Hr1G031200.40 , HORVU6Hr1G031200.47 , HORVU6Hr1G031200.46 , HORVU6Hr1G031200.45 , HORVU6Hr1G031200.44 , HORVU6Hr1G031200.49 , HORVU6Hr1G031200.48 , HORVU6Hr1G031230.40 , HORVU6Hr1G031200.51 , HORVU6Hr1G031230.7 , HORVU6Hr1G031230.6 , HORVU6Hr1G031230.5 , HORVU6Hr1G031230.4 , HORVU6Hr1G031230.3 , HORVU6Hr1G031230.2 , HORVU6Hr1G031230.19 , HORVU6Hr1G031230.18 , HORVU6Hr1G031230.17 , HORVU6Hr1G031230.16 , HORVU6Hr1G031230.15 , HORVU6Hr1G031230.14 , HORVU6Hr1G031230.13 , HORVU6Hr1G031230.12 , HORVU6Hr1G031230.11 , HORVU6Hr1G031230.10 , HORVU6Hr1G031200.8 , HORVU6Hr1G031230.8 , HORVU6Hr1G031200.36 , HORVU6Hr1G031230.27 , HORVU6Hr1G031230.24 , HORVU6Hr1G031230.25 , HORVU6Hr1G031230.22 , HORVU6Hr1G031200.33 , HORVU6Hr1G031230.20 , HORVU6Hr1G031230.21 , HORVU6Hr1G031200.50 , HORVU6Hr1G031230.41 , HORVU6Hr1G031200.52 , HORVU6Hr1G031200.53 , HORVU6Hr1G031200.54 , HORVU6Hr1G031230.28 , HORVU6Hr1G031230.29 , HORVU6Hr1G031200.18 , HORVU6Hr1G031200.19 , HORVU6Hr1G031200.14 , HORVU6Hr1G031200.16 , HORVU6Hr1G031200.17 , HORVU6Hr1G031200.10 , HORVU6Hr1G031200.12 , HORVU6Hr1G031200.13 , HORVU6Hr1G031230.31 , HORVU6Hr1G031230.30 , HORVU6Hr1G031200.23 , HORVU6Hr1G031200.22 , HORVU6Hr1G031200.25 , HORVU6Hr1G031200.24 , HORVU6Hr1G031230.37 , HORVU6Hr1G031200.26 , HORVU6Hr1G031200.29 , HORVU6Hr1G031200.28 , HORVU6Hr1G031200.6 , HORVU6Hr1G031200.7 , HORVU6Hr1G031200.4 , HORVU6Hr1G031200.5 , HORVU6Hr1G031200.2 , HORVU6Hr1G031200.3 , HORVU6Hr1G031230.1 , HORVU6Hr1G031200.1 , HORVU6Hr1G031230.9 , HORVU6Hr1G031200.15 , HORVU6Hr1G031200.21 , HORVU6Hr1G031200.20 , HORVU6Hr1G031230.33 , HORVU6Hr1G031230.32 , HORVU6Hr1G031230.35 , HORVU6Hr1G031230.34 , HORVU6Hr1G031200.27 , HORVU6Hr1G031230.36 , HORVU6Hr1G031230.39 , HORVU6Hr1G031230.38 , HORVU6Hr1G031200.9 , HORVU6Hr1G031200.11
Wheat TraesCS6B02G182300 , TraesCS6D02G144200 , TraesCS6A02G154400
Populus PNT11909 , PNT11908 , PNT11905 , PNT11904 , PNT11907 , PNT11906


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G062500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PHLOEM 2-LIKE A5, putative, expressed -
2 Sobic.008G027400 "a rapidly evolving gene family, termed Rp1/Pi37, which had an effector response that confers resistance to multiple pathogens across species."(PubMedID : 25928459)@rp1, putative, expressed -
3 Sobic.003G263701 - -
4 Sobic.004G264900 aminotransferase, classes I and II, domain containing protein, expressed K00817: histidinol-phosphate aminotransferase
5 Sobic.003G109000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
6 Sobic.005G052300 OsFBX412 - F-box domain containing protein, expressed -
7 Sobic.008G027500 rp1, putative, expressed -
8 Sobic.005G230100 GRAS family transcription factor domain containing protein, expressed -
9 Sobic.001G134000 - -
10 Sobic.007G132300 inactive receptor kinase At2g26730 precursor, putative, expressed -
11 Sobic.007G177700 - -
12 Sobic.005G075700 CHASE domain containing protein, expressed -
13 Sobic.007G014500 NB-ARC domain containing protein, expressed -
14 Sobic.009G251700 DNA ligase, putative, expressed -
15 Sobic.009G115800 REX1 DNA Repair family protein, expressed K10845: TTDA, GTF2H5, TFIIH basal transcription factor complex TTD-A subunit
16 Sobic.003G261766 - -
17 Sobic.002G319900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AAA family ATPase, putative, expressed K08900: mitochondrial chaperone BCS1
18 Sobic.004G262550 - -
19 Sobic.001G170600 OsFBX85 - F-box domain containing protein, expressed -
20 Sobic.005G216833 - -


Gene co-expression network
sample Sobic004G107800 Sobic004G107800 Sobic003G062500 Sobic003G062500 Sobic004G107800--Sobic003G062500 Sobic008G027400 Sobic008G027400 Sobic004G107800--Sobic008G027400 Sobic003G263701 Sobic003G263701 Sobic004G107800--Sobic003G263701 Sobic004G264900 Sobic004G264900 Sobic004G107800--Sobic004G264900 Sobic003G109000 Sobic003G109000 Sobic004G107800--Sobic003G109000 Sobic005G052300 Sobic005G052300 Sobic004G107800--Sobic005G052300 Sobic008G027500 Sobic008G027500 Sobic004G107800--Sobic008G027500 Sobic005G230100 Sobic005G230100 Sobic004G107800--Sobic005G230100 Sobic001G134000 Sobic001G134000 Sobic004G107800--Sobic001G134000 Sobic003G062500--Sobic004G264900 Sobic003G062500--Sobic004G107800 Sobic003G251200 Sobic003G251200 Sobic003G062500--Sobic003G251200 Sobic007G055900 Sobic007G055900 Sobic003G062500--Sobic007G055900 Sobic001G170600 Sobic001G170600 Sobic003G062500--Sobic001G170600 Sobic002G348300 Sobic002G348300 Sobic003G062500--Sobic002G348300 Sobic007G014500 Sobic007G014500 Sobic003G062500--Sobic007G014500 Sobic009G091940 Sobic009G091940 Sobic003G062500--Sobic009G091940 Sobic004G262550 Sobic004G262550 Sobic003G062500--Sobic004G262550 Sobic008G027400--Sobic008G027500 Sobic004G202900 Sobic004G202900 Sobic008G027400--Sobic004G202900 Sobic004G341600 Sobic004G341600 Sobic008G027400--Sobic004G341600 Sobic008G027400--Sobic004G107800 Sobic009G133900 Sobic009G133900 Sobic008G027400--Sobic009G133900 Sobic008G076900 Sobic008G076900 Sobic008G027400--Sobic008G076900 Sobic003G315166 Sobic003G315166 Sobic008G027400--Sobic003G315166 Sobic004G091500 Sobic004G091500 Sobic008G027400--Sobic004G091500 Sobic002G284600 Sobic002G284600 Sobic008G027400--Sobic002G284600 Sobic004G271350 Sobic004G271350 Sobic003G263701--Sobic004G271350 Sobic004G149150 Sobic004G149150 Sobic003G263701--Sobic004G149150 Sobic003G263701--Sobic004G262550 Sobic002G160500 Sobic002G160500 Sobic003G263701--Sobic002G160500 Sobic003G267150 Sobic003G267150 Sobic003G263701--Sobic003G267150 Sobic006G099400 Sobic006G099400 Sobic004G264900--Sobic006G099400 Sobic009G115800 Sobic009G115800 Sobic004G264900--Sobic009G115800 Sobic006G159500 Sobic006G159500 Sobic004G264900--Sobic006G159500 Sobic003G261766 Sobic003G261766 Sobic004G264900--Sobic003G261766 Sobic004G264900--Sobic004G262550 Sobic005G041150 Sobic005G041150 Sobic004G264900--Sobic005G041150 Sobic004G264900--Sobic002G160500 Sobic005G165300 Sobic005G165300 Sobic003G109000--Sobic005G165300 Sobic001G334800 Sobic001G334800 Sobic003G109000--Sobic001G334800 Sobic003G357900 Sobic003G357900 Sobic003G109000--Sobic003G357900 Sobic010G003800 Sobic010G003800 Sobic003G109000--Sobic010G003800 Sobic005G216833 Sobic005G216833 Sobic003G109000--Sobic005G216833 Sobic002G018800 Sobic002G018800 Sobic003G109000--Sobic002G018800 Sobic009G045400 Sobic009G045400 Sobic003G109000--Sobic009G045400 Sobic007G132300 Sobic007G132300 Sobic003G109000--Sobic007G132300 Sobic003G109000--Sobic003G261766 Sobic005G075700 Sobic005G075700 Sobic005G052300--Sobic005G075700 Sobic005G052300--Sobic003G261766 Sobic005G052300--Sobic009G115800 Sobic007G151250 Sobic007G151250 Sobic005G052300--Sobic007G151250 Sobic005G116800 Sobic005G116800 Sobic005G052300--Sobic005G116800 Sobic005G052300--Sobic006G099400 Sobic006G083050 Sobic006G083050 Sobic005G052300--Sobic006G083050 Sobic010G166850 Sobic010G166850 Sobic005G052300--Sobic010G166850 Sobic005G052300--Sobic005G165300 Sobic005G110508 Sobic005G110508 Sobic008G027500--Sobic005G110508 Sobic005G110511 Sobic005G110511 Sobic008G027500--Sobic005G110511 Sobic005G066500 Sobic005G066500 Sobic008G027500--Sobic005G066500 Sobic003G083800 Sobic003G083800 Sobic008G027500--Sobic003G083800 Sobic007G064900 Sobic007G064900 Sobic008G027500--Sobic007G064900 Sobic008G138700 Sobic008G138700 Sobic008G027500--Sobic008G138700 Sobic003G317300 Sobic003G317300 Sobic008G027500--Sobic003G317300 Sobic002G081850 Sobic002G081850 Sobic008G027500--Sobic002G081850 Sobic003G020500 Sobic003G020500 Sobic008G027500--Sobic003G020500 Sobic005G230100--Sobic001G134000 Sobic002G182900 Sobic002G182900 Sobic005G230100--Sobic002G182900 Sobic004G248000 Sobic004G248000 Sobic005G230100--Sobic004G248000 Sobic002G319900 Sobic002G319900 Sobic005G230100--Sobic002G319900 Sobic006G050550 Sobic006G050550 Sobic005G230100--Sobic006G050550 Sobic005G230100--Sobic004G149150 Sobic003G334500 Sobic003G334500 Sobic005G230100--Sobic003G334500 Sobic007G177901 Sobic007G177901 Sobic005G230100--Sobic007G177901 Sobic001G454850 Sobic001G454850 Sobic005G230100--Sobic001G454850 Sobic001G134000--Sobic002G319900 Sobic001G134000--Sobic007G014500 Sobic001G134000--Sobic003G334500 Sobic001G134000--Sobic004G271350 Sobic001G134000--Sobic003G267150 Sobic001G134000--Sobic005G216833 Sobic008G041500 Sobic008G041500 Sobic001G134000--Sobic008G041500 Sobic003G282400 Sobic003G282400 Sobic001G134000--Sobic003G282400 Sobic007G179100 Sobic007G179100 Sobic001G134000--Sobic007G179100
Octagon: transcription factors


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