Gene annotation
Transcriptome id Sobic.008G076900.1
Synonym Sb08g006910
Functional annotation expressed protein
UniProt A0A1Z5R662
Pfam PF04578 PF13968
Panther DB PTHR31325 PTHR31325:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G45540 : Protein of unknown function (DUF594)
RAP-DB (Rice) LOC_Os06g03380.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK07140 , KQK19630 , KQJ85813 , KQJ85817
Barley HORVU7Hr1G009350.8 , HORVU7Hr1G009350.9 , HORVU7Hr1G009350.6 , HORVU7Hr1G009350.7 , HORVU7Hr1G009350.2 , HORVU7Hr1G009350.3 , HORVU7Hr1G009350.1 , HORVU7Hr1G009350.10 , HORVU7Hr1G009350.11 , HORVU7Hr1G009350.12 , HORVU7Hr1G036050.1
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G099700 - -
2 Sobic.001G442800 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
3 Sobic.002G316000 expressed protein -
4 Sobic.001G361800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@proline-rich family protein, putative, expressed -
5 Sobic.005G054700 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
6 Sobic.004G154600 expressed protein -
7 Sobic.010G273400 expressed protein -
8 Sobic.008G110900 E2F-related protein, putative, expressed -
9 Sobic.009G260000 reticulon domain containing protein, putative, expressed -
10 Sobic.007G099500 hypothetical protein -
11 Sobic.007G202100 expressed protein -
12 Sobic.005G231400 cyclin, putative, expressed K18813: cyclin D7, plant
13 Sobic.004G240900 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower and stem, expression induced by IAA and BR treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
14 Sobic.001G514400 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
15 Sobic.009G175200 expressed protein -
16 Sobic.001G258100 OsSub60 - Putative Subtilisin homologue, expressed -
17 Sobic.009G259500 receptor protein kinase CLAVATA1 precursor, putative, expressed -
18 Sobic.006G104400 expressed protein -
19 Sobic.003G158100 DUF1399 containing protein, putative, expressed -
20 Sobic.002G072700 carboxyl-terminal peptidase, putative, expressed -


Gene co-expression network
sample Sobic008G076900 Sobic008G076900 Sobic009G099700 Sobic009G099700 Sobic008G076900--Sobic009G099700 Sobic001G442800 Sobic001G442800 Sobic008G076900--Sobic001G442800 Sobic002G316000 Sobic002G316000 Sobic008G076900--Sobic002G316000 Sobic001G361800 Sobic001G361800 Sobic008G076900--Sobic001G361800 Sobic005G054700 Sobic005G054700 Sobic008G076900--Sobic005G054700 Sobic004G154600 Sobic004G154600 Sobic008G076900--Sobic004G154600 Sobic010G273400 Sobic010G273400 Sobic008G076900--Sobic010G273400 Sobic008G110900 Sobic008G110900 Sobic008G076900--Sobic008G110900 Sobic009G260000 Sobic009G260000 Sobic008G076900--Sobic009G260000 Sobic009G099700--Sobic005G054700 Sobic009G175200 Sobic009G175200 Sobic009G099700--Sobic009G175200 Sobic001G514400 Sobic001G514400 Sobic009G099700--Sobic001G514400 Sobic004G247300 Sobic004G247300 Sobic009G099700--Sobic004G247300 Sobic009G099700--Sobic001G361800 Sobic001G258100 Sobic001G258100 Sobic009G099700--Sobic001G258100 Sobic007G210900 Sobic007G210900 Sobic009G099700--Sobic007G210900 Sobic009G099700--Sobic004G154600 Sobic002G232500 Sobic002G232500 Sobic009G099700--Sobic002G232500 Sobic006G197500 Sobic006G197500 Sobic001G442800--Sobic006G197500 Sobic001G442800--Sobic008G076900 Sobic008G182500 Sobic008G182500 Sobic001G442800--Sobic008G182500 Sobic001G442800--Sobic009G175200 Sobic003G158100 Sobic003G158100 Sobic001G442800--Sobic003G158100 Sobic001G442800--Sobic009G099700 Sobic007G099500 Sobic007G099500 Sobic001G442800--Sobic007G099500 Sobic009G036500 Sobic009G036500 Sobic001G442800--Sobic009G036500 Sobic001G442800--Sobic004G154600 Sobic010G208500 Sobic010G208500 Sobic002G316000--Sobic010G208500 Sobic002G047100 Sobic002G047100 Sobic002G316000--Sobic002G047100 Sobic002G316000--Sobic004G154600 Sobic003G038000 Sobic003G038000 Sobic002G316000--Sobic003G038000 Sobic007G115000 Sobic007G115000 Sobic002G316000--Sobic007G115000 Sobic001G184400 Sobic001G184400 Sobic002G316000--Sobic001G184400 Sobic010G091700 Sobic010G091700 Sobic002G316000--Sobic010G091700 Sobic004G193800 Sobic004G193800 Sobic002G316000--Sobic004G193800 Sobic003G424100 Sobic003G424100 Sobic002G316000--Sobic003G424100 Sobic004G199700 Sobic004G199700 Sobic001G361800--Sobic004G199700 Sobic008G148500 Sobic008G148500 Sobic001G361800--Sobic008G148500 Sobic003G174900 Sobic003G174900 Sobic001G361800--Sobic003G174900 Sobic006G272500 Sobic006G272500 Sobic001G361800--Sobic006G272500 Sobic002G072700 Sobic002G072700 Sobic001G361800--Sobic002G072700 Sobic009G259500 Sobic009G259500 Sobic001G361800--Sobic009G259500 Sobic001G361800--Sobic009G175200 Sobic001G361800--Sobic005G054700 Sobic009G124800 Sobic009G124800 Sobic001G361800--Sobic009G124800 Sobic005G054700--Sobic004G247300 Sobic005G054700--Sobic009G099700 Sobic005G054700--Sobic001G361800 Sobic005G054700--Sobic001G514400 Sobic002G034301 Sobic002G034301 Sobic005G054700--Sobic002G034301 Sobic005G054700--Sobic009G175200 Sobic002G168600 Sobic002G168600 Sobic005G054700--Sobic002G168600 Sobic010G161900 Sobic010G161900 Sobic005G054700--Sobic010G161900 Sobic002G393200 Sobic002G393200 Sobic005G054700--Sobic002G393200 Sobic004G154600--Sobic009G259500 Sobic004G205500 Sobic004G205500 Sobic004G154600--Sobic004G205500 Sobic004G259101 Sobic004G259101 Sobic004G154600--Sobic004G259101 Sobic004G154600--Sobic007G210900 Sobic004G154600--Sobic004G199700 Sobic004G154600--Sobic002G072700 Sobic004G154600--Sobic003G174900 Sobic002G367300 Sobic002G367300 Sobic004G154600--Sobic002G367300 Sobic006G262600 Sobic006G262600 Sobic004G154600--Sobic006G262600 Sobic002G006801 Sobic002G006801 Sobic010G273400--Sobic002G006801 Sobic001G062750 Sobic001G062750 Sobic010G273400--Sobic001G062750 Sobic006G189400 Sobic006G189400 Sobic010G273400--Sobic006G189400 Sobic010G180750 Sobic010G180750 Sobic010G273400--Sobic010G180750 Sobic001G256400 Sobic001G256400 Sobic010G273400--Sobic001G256400 Sobic002G209500 Sobic002G209500 Sobic010G273400--Sobic002G209500 Sobic007G037700 Sobic007G037700 Sobic010G273400--Sobic007G037700 Sobic005G091100 Sobic005G091100 Sobic010G273400--Sobic005G091100 Sobic010G273400--Sobic008G076900 Sobic005G203400 Sobic005G203400 Sobic008G110900--Sobic005G203400 Sobic004G046001 Sobic004G046001 Sobic008G110900--Sobic004G046001 Sobic002G088800 Sobic002G088800 Sobic008G110900--Sobic002G088800 Sobic008G110900--Sobic008G182500 Sobic008G110900--Sobic008G076900 Sobic002G060500 Sobic002G060500 Sobic008G110900--Sobic002G060500 Sobic005G054600 Sobic005G054600 Sobic008G110900--Sobic005G054600 Sobic005G148400 Sobic005G148400 Sobic008G110900--Sobic005G148400 Sobic005G171600 Sobic005G171600 Sobic008G110900--Sobic005G171600 Sobic009G260000--Sobic004G154600 Sobic005G065600 Sobic005G065600 Sobic009G260000--Sobic005G065600 Sobic008G086200 Sobic008G086200 Sobic009G260000--Sobic008G086200 Sobic006G133600 Sobic006G133600 Sobic009G260000--Sobic006G133600 Sobic006G213100 Sobic006G213100 Sobic009G260000--Sobic006G213100 Sobic009G260000--Sobic007G210900 Sobic001G069800 Sobic001G069800 Sobic009G260000--Sobic001G069800 Sobic009G260000--Sobic009G175200 Sobic002G007200 Sobic002G007200 Sobic009G260000--Sobic002G007200
Octagon: transcription factors


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