Gene annotation
Transcriptome id Sobic.003G158100.1
Synonym Sb03g013780
Functional annotation DUF1399 containing protein, putative, expressed
UniProt A0A1W0VXF5
Pfam PF07173
Panther DB PTHR34365 PTHR34365:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G56230 : Protein of unknown function (DUF1399)
RAP-DB (Rice) LOC_Os01g24480.1 : DUF1399 containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a024487
Brachypodium PNT70471 , PNT70472 , KQK04251 , KQK04252 , KQK04253 , KQK04254 , KQK04255
Barley HORVU7Hr1G051590.11 , HORVU7Hr1G051590.10 , HORVU7Hr1G051590.1 , HORVU7Hr1G051590.4 , HORVU7Hr1G051590.7 , HORVU7Hr1G051590.9
Wheat TraesCS7D02G249400 , TraesCS7D02G249400 , TraesCS7D02G249400 , TraesCS7D02G249400 , TraesCS7D02G249400 , TraesCS7B02G140400 , TraesCS7B02G140400 , TraesCS7B02G140400 , TraesCS7B02G140400 , TraesCS7B02G140400 , TraesCS7A02G250700 , TraesCS7A02G250700 , TraesCS7A02G250700 , TraesCS7A02G250700 , TraesCS7A02G250700 , TraesCS7A02G250700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G099500 hypothetical protein -
2 Sobic.002G177400 expressed protein -
3 Sobic.003G128600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNAJ heat shock N-terminal domain-containing protein, putative, expressed K09527: DnaJ homolog subfamily C member 7
4 Sobic.009G059600 KIP1, putative, expressed -
5 Sobic.003G315332 - K15421: secretion-regulating guanine nucleotide exchange factor
6 Sobic.002G090400 polygalacturonase, putative, expressed -
7 Sobic.002G076400 structural constituent of ribosome, putative, expressed -
8 Sobic.004G169501 - -
9 Sobic.003G204000 expressed protein -
10 Sobic.004G164600 - -
11 Sobic.007G073400 SHR5-receptor-like kinase, putative, expressed -
12 Sobic.004G088400 GTPase-activating protein, putative, expressed -
13 Sobic.005G054000 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
14 Sobic.008G068800 cytokinin inducible protein, putative, expressed -
15 Sobic.002G221700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
16 Sobic.001G347600 paramyosin, putative, expressed -
17 Sobic.002G056100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Leucine Rich Repeat family protein, expressed -
18 Sobic.008G009500 pentatricopeptide, putative, expressed -
19 Sobic.003G435600 CBS domain-containing protein, putative, expressed -
20 Sobic.002G007250 - -


Gene co-expression network
sample Sobic003G158100 Sobic003G158100 Sobic007G099500 Sobic007G099500 Sobic003G158100--Sobic007G099500 Sobic002G177400 Sobic002G177400 Sobic003G158100--Sobic002G177400 Sobic003G128600 Sobic003G128600 Sobic003G158100--Sobic003G128600 Sobic009G059600 Sobic009G059600 Sobic003G158100--Sobic009G059600 Sobic003G315332 Sobic003G315332 Sobic003G158100--Sobic003G315332 Sobic002G090400 Sobic002G090400 Sobic003G158100--Sobic002G090400 Sobic002G076400 Sobic002G076400 Sobic003G158100--Sobic002G076400 Sobic004G169501 Sobic004G169501 Sobic003G158100--Sobic004G169501 Sobic003G204000 Sobic003G204000 Sobic003G158100--Sobic003G204000 Sobic007G099500--Sobic009G059600 Sobic004G164600 Sobic004G164600 Sobic007G099500--Sobic004G164600 Sobic007G099500--Sobic002G090400 Sobic007G073400 Sobic007G073400 Sobic007G099500--Sobic007G073400 Sobic003G424100 Sobic003G424100 Sobic007G099500--Sobic003G424100 Sobic004G240900 Sobic004G240900 Sobic007G099500--Sobic004G240900 Sobic008G031350 Sobic008G031350 Sobic007G099500--Sobic008G031350 Sobic004G212800 Sobic004G212800 Sobic007G099500--Sobic004G212800 Sobic002G221700 Sobic002G221700 Sobic007G099500--Sobic002G221700 Sobic004G088400 Sobic004G088400 Sobic002G177400--Sobic004G088400 Sobic009G030300 Sobic009G030300 Sobic002G177400--Sobic009G030300 Sobic008G117200 Sobic008G117200 Sobic002G177400--Sobic008G117200 Sobic007G008800 Sobic007G008800 Sobic002G177400--Sobic007G008800 Sobic008G129700 Sobic008G129700 Sobic002G177400--Sobic008G129700 Sobic007G116400 Sobic007G116400 Sobic002G177400--Sobic007G116400 Sobic003G346000 Sobic003G346000 Sobic002G177400--Sobic003G346000 Sobic004G061900 Sobic004G061900 Sobic002G177400--Sobic004G061900 Sobic008G068800 Sobic008G068800 Sobic002G177400--Sobic008G068800 Sobic003G128600--Sobic009G059600 Sobic003G128600--Sobic004G169501 Sobic003G015000 Sobic003G015000 Sobic003G128600--Sobic003G015000 Sobic002G140800 Sobic002G140800 Sobic003G128600--Sobic002G140800 Sobic004G286900 Sobic004G286900 Sobic003G128600--Sobic004G286900 Sobic009G257300 Sobic009G257300 Sobic003G128600--Sobic009G257300 Sobic003G128600--Sobic004G164600 Sobic003G128600--Sobic008G068800 Sobic003G128600--Sobic008G117200 Sobic009G059600--Sobic004G164600 Sobic009G059600--Sobic007G099500 Sobic009G059600--Sobic004G212800 Sobic009G059600--Sobic007G073400 Sobic009G059600--Sobic008G068800 Sobic009G059600--Sobic003G128600 Sobic009G059600--Sobic003G424100 Sobic007G142050 Sobic007G142050 Sobic009G059600--Sobic007G142050 Sobic004G076732 Sobic004G076732 Sobic009G059600--Sobic004G076732 Sobic003G315332--Sobic004G169501 Sobic003G315332--Sobic007G142050 Sobic003G315332--Sobic002G076400 Sobic003G315332--Sobic008G068800 Sobic006G129700 Sobic006G129700 Sobic003G315332--Sobic006G129700 Sobic001G543900 Sobic001G543900 Sobic003G315332--Sobic001G543900 Sobic010G263800 Sobic010G263800 Sobic003G315332--Sobic010G263800 Sobic003G315332--Sobic003G204000 Sobic007G089600 Sobic007G089600 Sobic003G315332--Sobic007G089600 Sobic002G090400--Sobic007G099500 Sobic002G049000 Sobic002G049000 Sobic002G090400--Sobic002G049000 Sobic002G090400--Sobic008G068800 Sobic002G090400--Sobic004G169501 Sobic004G143700 Sobic004G143700 Sobic002G090400--Sobic004G143700 Sobic002G090400--Sobic009G059600 Sobic002G090400--Sobic003G424100 Sobic002G090400--Sobic007G073400 Sobic006G145000 Sobic006G145000 Sobic002G090400--Sobic006G145000 Sobic007G191100 Sobic007G191100 Sobic002G076400--Sobic007G191100 Sobic002G076400--Sobic003G315332 Sobic007G011400 Sobic007G011400 Sobic002G076400--Sobic007G011400 Sobic002G076400--Sobic007G142050 Sobic002G076400--Sobic008G117200 Sobic002G076400--Sobic010G263800 Sobic002G076400--Sobic002G177400 Sobic002G076400--Sobic008G068800 Sobic002G076400--Sobic004G061900 Sobic004G169501--Sobic003G315332 Sobic004G169501--Sobic007G142050 Sobic004G169501--Sobic008G068800 Sobic004G169501--Sobic007G116400 Sobic004G169501--Sobic008G117200 Sobic004G169501--Sobic003G204000 Sobic001G267233 Sobic001G267233 Sobic004G169501--Sobic001G267233 Sobic002G181450 Sobic002G181450 Sobic004G169501--Sobic002G181450 Sobic004G169501--Sobic007G089600 Sobic001G024200 Sobic001G024200 Sobic003G204000--Sobic001G024200 Sobic003G204000--Sobic008G068800 Sobic003G204000--Sobic004G212800 Sobic008G116500 Sobic008G116500 Sobic003G204000--Sobic008G116500 Sobic003G204000--Sobic004G169501 Sobic003G204000--Sobic001G543900 Sobic004G112500 Sobic004G112500 Sobic003G204000--Sobic004G112500 Sobic002G297800 Sobic002G297800 Sobic003G204000--Sobic002G297800 Sobic003G204000--Sobic003G315332
Octagon: transcription factors


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