Gene annotation
Transcriptome id Sobic.009G260000.1
Synonym Sb09g030920
Functional annotation reticulon domain containing protein, putative, expressed
UniProt A0A1Z5R539
Pfam PF02453
Panther DB PTHR10994 PTHR10994:SF65
NCBI CDD KOG1792; Reticulon
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G19460 : Reticulon family protein
RAP-DB (Rice) LOC_Os04g29920.1 : reticulon domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a044795
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G154600 expressed protein -
2 Sobic.005G065600 - -
3 Sobic.008G086200 expressed protein -
4 Sobic.006G133600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
5 Sobic.006G213100 UDP-glucose Pyrophosphorylase(PubMedID : 26616172)@UTP--glucose-1-phosphate uridylyltransferase, putative, expressed K00972: UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase
6 Sobic.007G210900 expressed protein -
7 Sobic.001G069800 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
8 Sobic.009G175200 expressed protein -
9 Sobic.002G007200 plastocyanin-like domain containing protein, putative, expressed -
10 Sobic.003G328800 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
11 Sobic.004G240900 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower and stem, expression induced by IAA and BR treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
12 Sobic.008G076900 expressed protein -
13 Sobic.006G248300 "Lypoxygenase, probably induced by oxidative stress, up-regulated under severe drought stress"(PubMedID : 24655390)@lipoxygenase, putative, expressed K15718: linoleate 9S-lipoxygenase
14 Sobic.007G099500 hypothetical protein -
15 Sobic.007G066050 - -
16 Sobic.004G054200 avr9/Cf-9 rapidly elicited protein 137, putative, expressed -
17 Sobic.001G089100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
18 Sobic.010G173900 expressed protein -
19 Sobic.001G442800 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
20 Sobic.002G090400 polygalacturonase, putative, expressed -


Gene co-expression network
sample Sobic009G260000 Sobic009G260000 Sobic004G154600 Sobic004G154600 Sobic009G260000--Sobic004G154600 Sobic005G065600 Sobic005G065600 Sobic009G260000--Sobic005G065600 Sobic008G086200 Sobic008G086200 Sobic009G260000--Sobic008G086200 Sobic006G133600 Sobic006G133600 Sobic009G260000--Sobic006G133600 Sobic006G213100 Sobic006G213100 Sobic009G260000--Sobic006G213100 Sobic007G210900 Sobic007G210900 Sobic009G260000--Sobic007G210900 Sobic001G069800 Sobic001G069800 Sobic009G260000--Sobic001G069800 Sobic009G175200 Sobic009G175200 Sobic009G260000--Sobic009G175200 Sobic002G007200 Sobic002G007200 Sobic009G260000--Sobic002G007200 Sobic009G259500 Sobic009G259500 Sobic004G154600--Sobic009G259500 Sobic004G205500 Sobic004G205500 Sobic004G154600--Sobic004G205500 Sobic004G259101 Sobic004G259101 Sobic004G154600--Sobic004G259101 Sobic004G154600--Sobic007G210900 Sobic004G199700 Sobic004G199700 Sobic004G154600--Sobic004G199700 Sobic002G072700 Sobic002G072700 Sobic004G154600--Sobic002G072700 Sobic003G174900 Sobic003G174900 Sobic004G154600--Sobic003G174900 Sobic002G367300 Sobic002G367300 Sobic004G154600--Sobic002G367300 Sobic006G262600 Sobic006G262600 Sobic004G154600--Sobic006G262600 Sobic005G065600--Sobic009G260000 Sobic010G104200 Sobic010G104200 Sobic005G065600--Sobic010G104200 Sobic010G063433 Sobic010G063433 Sobic005G065600--Sobic010G063433 Sobic004G112800 Sobic004G112800 Sobic005G065600--Sobic004G112800 Sobic001G422850 Sobic001G422850 Sobic005G065600--Sobic001G422850 Sobic006G055100 Sobic006G055100 Sobic005G065600--Sobic006G055100 Sobic001G028600 Sobic001G028600 Sobic005G065600--Sobic001G028600 Sobic006G167250 Sobic006G167250 Sobic005G065600--Sobic006G167250 Sobic007G006501 Sobic007G006501 Sobic005G065600--Sobic007G006501 Sobic004G225700 Sobic004G225700 Sobic008G086200--Sobic004G225700 Sobic008G086200--Sobic009G175200 Sobic008G086200--Sobic003G174900 Sobic003G375000 Sobic003G375000 Sobic008G086200--Sobic003G375000 Sobic009G123500 Sobic009G123500 Sobic008G086200--Sobic009G123500 Sobic008G190500 Sobic008G190500 Sobic008G086200--Sobic008G190500 Sobic004G289500 Sobic004G289500 Sobic008G086200--Sobic004G289500 Sobic009G164900 Sobic009G164900 Sobic008G086200--Sobic009G164900 Sobic010G118700 Sobic010G118700 Sobic008G086200--Sobic010G118700 Sobic004G240900 Sobic004G240900 Sobic006G133600--Sobic004G240900 Sobic006G133600--Sobic006G262600 Sobic006G133600--Sobic006G213100 Sobic003G044900 Sobic003G044900 Sobic006G133600--Sobic003G044900 Sobic009G214600 Sobic009G214600 Sobic006G133600--Sobic009G214600 Sobic007G099500 Sobic007G099500 Sobic006G133600--Sobic007G099500 Sobic001G024200 Sobic001G024200 Sobic006G133600--Sobic001G024200 Sobic009G059600 Sobic009G059600 Sobic006G133600--Sobic009G059600 Sobic002G221700 Sobic002G221700 Sobic006G133600--Sobic002G221700 Sobic006G213100--Sobic006G133600 Sobic006G213100--Sobic009G214600 Sobic003G397300 Sobic003G397300 Sobic006G213100--Sobic003G397300 Sobic003G328800 Sobic003G328800 Sobic006G213100--Sobic003G328800 Sobic007G191100 Sobic007G191100 Sobic006G213100--Sobic007G191100 Sobic001G056300 Sobic001G056300 Sobic006G213100--Sobic001G056300 Sobic006G213100--Sobic003G044900 Sobic004G220300 Sobic004G220300 Sobic006G213100--Sobic004G220300 Sobic006G213100--Sobic007G099500 Sobic003G420800 Sobic003G420800 Sobic007G210900--Sobic003G420800 Sobic007G210900--Sobic004G154600 Sobic007G210900--Sobic004G199700 Sobic002G002100 Sobic002G002100 Sobic007G210900--Sobic002G002100 Sobic002G348700 Sobic002G348700 Sobic007G210900--Sobic002G348700 Sobic007G210900--Sobic004G205500 Sobic006G167300 Sobic006G167300 Sobic007G210900--Sobic006G167300 Sobic007G210900--Sobic008G190500 Sobic002G179700 Sobic002G179700 Sobic007G210900--Sobic002G179700 Sobic009G026200 Sobic009G026200 Sobic001G069800--Sobic009G026200 Sobic004G086100 Sobic004G086100 Sobic001G069800--Sobic004G086100 Sobic004G067000 Sobic004G067000 Sobic001G069800--Sobic004G067000 Sobic004G134100 Sobic004G134100 Sobic001G069800--Sobic004G134100 Sobic001G420700 Sobic001G420700 Sobic001G069800--Sobic001G420700 Sobic004G006700 Sobic004G006700 Sobic001G069800--Sobic004G006700 Sobic003G151300 Sobic003G151300 Sobic001G069800--Sobic003G151300 Sobic001G467000 Sobic001G467000 Sobic001G069800--Sobic001G467000 Sobic008G139700 Sobic008G139700 Sobic001G069800--Sobic008G139700 Sobic009G175200--Sobic008G086200 Sobic009G175200--Sobic003G174900 Sobic009G099700 Sobic009G099700 Sobic009G175200--Sobic009G099700 Sobic001G361800 Sobic001G361800 Sobic009G175200--Sobic001G361800 Sobic004G247300 Sobic004G247300 Sobic009G175200--Sobic004G247300 Sobic009G175200--Sobic007G210900 Sobic009G175200--Sobic004G154600 Sobic009G175200--Sobic003G375000 Sobic009G175200--Sobic004G225700 Sobic002G007200--Sobic006G262600 Sobic003G380500 Sobic003G380500 Sobic002G007200--Sobic003G380500 Sobic002G007200--Sobic009G164900 Sobic002G007200--Sobic006G133600 Sobic002G334600 Sobic002G334600 Sobic002G007200--Sobic002G334600 Sobic009G064900 Sobic009G064900 Sobic002G007200--Sobic009G064900 Sobic002G007200--Sobic002G367300 Sobic004G287800 Sobic004G287800 Sobic002G007200--Sobic004G287800 Sobic002G007200--Sobic004G205500
Octagon: transcription factors


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