Gene annotation
Transcriptome id Sobic.008G097300.1
Synonym Sb08g014860
Functional annotation nodulin, putative, expressed
UniProt A0A1Z5R5Q8
Pfam PF06813
Panther DB PTHR21576 PTHR21576:SF31
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G28120 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os12g29950.2 : nodulin, putative, expressed
MaizeGDB (Corn) Zm00025a024846 , Zm00025a007605 , Zm00025a008596
Brachypodium KQJ86716 , KQK12657 , KQK20512 , KQK13777 , PNT76871 , KQJ96963
Barley HORVU3Hr1G086040.3 , HORVU3Hr1G086040.1 , HORVU3Hr1G086040.7 , HORVU3Hr1G086040.6 , HORVU3Hr1G086040.5 , HORVU3Hr1G086040.4 , HORVU5Hr1G106960.8 , HORVU5Hr1G106960.5 , HORVU5Hr1G106960.4 , HORVU5Hr1G106960.7 , HORVU5Hr1G106960.6 , HORVU5Hr1G106960.1 , HORVU5Hr1G106960.3 , HORVU5Hr1G106960.2 , HORVU3Hr1G086040.2 , HORVU7Hr1G110840.5 , HORVU7Hr1G110840.4 , HORVU7Hr1G110840.3 , HORVU7Hr1G110840.2 , HORVU7Hr1G110840.1
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.008G097300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G163600 WD-40 repeat family protein, putative, expressed -
2 Sobic.008G081400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR3-A, putative, expressed -
3 Sobic.001G358200 calmodulin-binding protein, putative, expressed -
4 Sobic.010G275001 - -
5 Sobic.003G401500 expressed protein -
6 Sobic.002G064200 expressed protein -
7 Sobic.009G192100 DUF567 domain containing protein, putative, expressed -
8 Sobic.009G115500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.006G007450 - -
10 Sobic.002G209200 glutamate receptor, putative, expressed -
11 Sobic.K010100 expressed protein -
12 Sobic.003G385500 "Lypoxygenase, probably induced by oxidative stress, up-regulated under severe drought stress"(PubMedID : 24655390)@lipoxygenase, putative, expressed K15718: linoleate 9S-lipoxygenase
13 Sobic.009G181300 TKL_IRAK_DUF26-la.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
14 Sobic.001G449800 OsWAK25 - OsWAK receptor-like protein kinase, expressed -
15 Sobic.002G202700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY76, expressed -
16 Sobic.001G448300 phytosulfokines precursor, putative, expressed -
17 Sobic.008G054100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
18 Sobic.003G417000 esterase, putative, expressed -
19 Sobic.009G233900 dehydrogenase, putative, expressed -
20 Sobic.008G172800 expressed protein -


Gene co-expression network
sample Sobic008G097300 Sobic008G097300 Sobic001G163600 Sobic001G163600 Sobic008G097300--Sobic001G163600 Sobic008G081400 Sobic008G081400 Sobic008G097300--Sobic008G081400 Sobic001G358200 Sobic001G358200 Sobic008G097300--Sobic001G358200 Sobic010G275001 Sobic010G275001 Sobic008G097300--Sobic010G275001 Sobic003G401500 Sobic003G401500 Sobic008G097300--Sobic003G401500 Sobic002G064200 Sobic002G064200 Sobic008G097300--Sobic002G064200 Sobic009G192100 Sobic009G192100 Sobic008G097300--Sobic009G192100 Sobic009G115500 Sobic009G115500 Sobic008G097300--Sobic009G115500 Sobic006G007450 Sobic006G007450 Sobic008G097300--Sobic006G007450 Sobic008G172800 Sobic008G172800 Sobic001G163600--Sobic008G172800 Sobic007G025900 Sobic007G025900 Sobic001G163600--Sobic007G025900 Sobic002G001900 Sobic002G001900 Sobic001G163600--Sobic002G001900 Sobic001G163600--Sobic008G097300 Sobic006G123500 Sobic006G123500 Sobic001G163600--Sobic006G123500 Sobic004G099700 Sobic004G099700 Sobic001G163600--Sobic004G099700 Sobic004G063200 Sobic004G063200 Sobic001G163600--Sobic004G063200 Sobic006G002900 Sobic006G002900 Sobic001G163600--Sobic006G002900 Sobic001G404500 Sobic001G404500 Sobic001G163600--Sobic001G404500 Sobic009G181300 Sobic009G181300 Sobic008G081400--Sobic009G181300 Sobic006G274500 Sobic006G274500 Sobic008G081400--Sobic006G274500 Sobic004G349300 Sobic004G349300 Sobic008G081400--Sobic004G349300 Sobic003G385500 Sobic003G385500 Sobic008G081400--Sobic003G385500 Sobic002G027700 Sobic002G027700 Sobic008G081400--Sobic002G027700 Sobic003G417000 Sobic003G417000 Sobic008G081400--Sobic003G417000 Sobic008G074500 Sobic008G074500 Sobic008G081400--Sobic008G074500 Sobic002G067300 Sobic002G067300 Sobic008G081400--Sobic002G067300 Sobic008G081400--Sobic008G097300 Sobic003G201600 Sobic003G201600 Sobic001G358200--Sobic003G201600 Sobic003G015200 Sobic003G015200 Sobic001G358200--Sobic003G015200 Sobic001G358200--Sobic008G081400 Sobic009G015500 Sobic009G015500 Sobic001G358200--Sobic009G015500 Sobic007G058600 Sobic007G058600 Sobic001G358200--Sobic007G058600 Sobic007G156800 Sobic007G156800 Sobic001G358200--Sobic007G156800 Sobic009G006500 Sobic009G006500 Sobic001G358200--Sobic009G006500 Sobic010G070750 Sobic010G070750 Sobic001G358200--Sobic010G070750 Sobic003G286700 Sobic003G286700 Sobic001G358200--Sobic003G286700 Sobic002G269032 Sobic002G269032 Sobic010G275001--Sobic002G269032 Sobic010G018300 Sobic010G018300 Sobic010G275001--Sobic010G018300 Sobic001G381300 Sobic001G381300 Sobic010G275001--Sobic001G381300 Sobic003G037100 Sobic003G037100 Sobic010G275001--Sobic003G037100 Sobic005G226100 Sobic005G226100 Sobic010G275001--Sobic005G226100 Sobic009G067400 Sobic009G067400 Sobic010G275001--Sobic009G067400 Sobic001G146400 Sobic001G146400 Sobic010G275001--Sobic001G146400 Sobic001G146500 Sobic001G146500 Sobic010G275001--Sobic001G146500 Sobic002G202800 Sobic002G202800 Sobic010G275001--Sobic002G202800 Sobic001G330925 Sobic001G330925 Sobic003G401500--Sobic001G330925 Sobic009G173800 Sobic009G173800 Sobic003G401500--Sobic009G173800 Sobic003G401500--Sobic002G064200 Sobic001G448800 Sobic001G448800 Sobic003G401500--Sobic001G448800 Sobic009G233900 Sobic009G233900 Sobic003G401500--Sobic009G233900 Sobic004G179500 Sobic004G179500 Sobic003G401500--Sobic004G179500 Sobic004G138400 Sobic004G138400 Sobic003G401500--Sobic004G138400 Sobic003G401500--Sobic009G115500 Sobic009G082800 Sobic009G082800 Sobic003G401500--Sobic009G082800 Sobic002G064200--Sobic002G202800 Sobic002G064200--Sobic009G115500 Sobic010G172300 Sobic010G172300 Sobic002G064200--Sobic010G172300 Sobic002G202700 Sobic002G202700 Sobic002G064200--Sobic002G202700 Sobic010G225500 Sobic010G225500 Sobic002G064200--Sobic010G225500 Sobic002G130500 Sobic002G130500 Sobic002G064200--Sobic002G130500 Sobic002G173900 Sobic002G173900 Sobic002G064200--Sobic002G173900 Sobic002G064200--Sobic006G007450 Sobic001G363200 Sobic001G363200 Sobic002G064200--Sobic001G363200 Sobic008G181300 Sobic008G181300 Sobic009G192100--Sobic008G181300 Sobic002G407200 Sobic002G407200 Sobic009G192100--Sobic002G407200 Sobic001G518800 Sobic001G518800 Sobic009G192100--Sobic001G518800 Sobic008G018600 Sobic008G018600 Sobic009G192100--Sobic008G018600 Sobic001G182600 Sobic001G182600 Sobic009G192100--Sobic001G182600 Sobic008G038100 Sobic008G038100 Sobic009G192100--Sobic008G038100 Sobic001G345400 Sobic001G345400 Sobic009G192100--Sobic001G345400 Sobic001G056500 Sobic001G056500 Sobic009G192100--Sobic001G056500 Sobic002G403300 Sobic002G403300 Sobic009G192100--Sobic002G403300 Sobic009G115500--Sobic002G064200 Sobic010G046900 Sobic010G046900 Sobic009G115500--Sobic010G046900 Sobic009G115500--Sobic002G202800 Sobic009G115500--Sobic002G130500 Sobic009G115500--Sobic002G202700 Sobic009G115300 Sobic009G115300 Sobic009G115500--Sobic009G115300 Sobic009G115500--Sobic002G173900 Sobic009G115500--Sobic009G173800 Sobic006G123400 Sobic006G123400 Sobic009G115500--Sobic006G123400 Sobic006G007650 Sobic006G007650 Sobic006G007450--Sobic006G007650 Sobic006G007450--Sobic002G064200 Sobic006G007450--Sobic002G202700 Sobic006G007450--Sobic010G225500 Sobic006G007450--Sobic009G115300 Sobic002G108400 Sobic002G108400 Sobic006G007450--Sobic002G108400 Sobic008G028600 Sobic008G028600 Sobic006G007450--Sobic008G028600 Sobic008G095100 Sobic008G095100 Sobic006G007450--Sobic008G095100 Sobic002G334500 Sobic002G334500 Sobic006G007450--Sobic002G334500
Octagon: transcription factors


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