Gene annotation
Transcriptome id Sobic.008G183400.1
Synonym PLDALPHA1;PLDALPHA1;SbPLDα1, PLD, Sb08g022520, PLDALPHA1
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
Phospholipase dalpha 1 (PubMedID : 26320239)
Phospholipase D alpha 1 PLD Alpha 1 (Zm) (PubMedID : 27208977)
highly upregulated during chilling in a chilling tolerant sorghum NSG (PubMedID : 29293808)
phospholipase D, putative, expressed
UniProt C5YSV6
Pfam PF00168 PF00614 PF12357
Panther DB PTHR18896 PTHR18896:SF67
NCBI CDD -
KEGG Orthology K01115; phospholipase D1/2
Gene Ontology GO:0005515; protein binding GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT3G15730 : phospholipase D alpha 1
RAP-DB (Rice) LOC_Os01g07760.2 : phospholipase D, putative, expressed
MaizeGDB (Corn) Zm00025a035726 , Zm00025a052107 , Zm00025a023249
Brachypodium KQK02930 , KQK02929
Barley HORVU1Hr1G025370.1 , HORVU1Hr1G025370.2 , HORVU1Hr1G025370.3 , HORVU3Hr1G024530.7 , HORVU3Hr1G024530.6 , HORVU3Hr1G024530.4 , HORVU3Hr1G024530.3 , HORVU3Hr1G024530.1 , HORVU3Hr1G024530.9 , HORVU3Hr1G024530.8 , HORVU3Hr1G024530.11 , HORVU3Hr1G024530.10 , HORVU3Hr1G024530.5 , HORVU3Hr1G024530.2
Wheat TraesCS3D02G130900 , TraesCS3B02G149100 , TraesCS3A02G130000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G084700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
2 Sobic.010G084100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
3 Sobic.002G251000 expressed protein -
4 Sobic.005G101700 dirigent, putative, expressed -
5 Sobic.005G179200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsWAK112d - OsWAK receptor-like protein kinase, expressed -
6 Sobic.006G148900 phenylalanine ammonia-lyase, putative, expressed K10775: phenylalanine ammonia-lyase
7 Sobic.001G050100 Cupin domain containing protein, expressed -
8 Sobic.005G101600 dirigent, putative, expressed -
9 Sobic.004G071650 - -
10 Sobic.001G192200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
11 Sobic.003G282901 - -
12 Sobic.001G330100 ZOS3-12 - C2H2 zinc finger protein, expressed -
13 Sobic.010G117900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
14 Sobic.010G176600 - -
15 Sobic.002G184200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
16 Sobic.002G139400 AP2 domain containing protein, expressed -
17 Sobic.005G206601 - -
18 Sobic.001G330200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ZOS3-12 - C2H2 zinc finger protein, expressed -
19 Sobic.009G224100 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
20 Sobic.003G116800 cinnamoyl CoA reductase, putative, expressed K09753: cinnamoyl-CoA reductase


Gene co-expression network
sample Sobic008G183400 Sobic008G183400 Sobic010G084700 Sobic010G084700 Sobic008G183400--Sobic010G084700 Sobic010G084100 Sobic010G084100 Sobic008G183400--Sobic010G084100 Sobic002G251000 Sobic002G251000 Sobic008G183400--Sobic002G251000 Sobic005G101700 Sobic005G101700 Sobic008G183400--Sobic005G101700 Sobic005G179200 Sobic005G179200 Sobic008G183400--Sobic005G179200 Sobic006G148900 Sobic006G148900 Sobic008G183400--Sobic006G148900 Sobic001G050100 Sobic001G050100 Sobic008G183400--Sobic001G050100 Sobic005G101600 Sobic005G101600 Sobic008G183400--Sobic005G101600 Sobic004G071650 Sobic004G071650 Sobic008G183400--Sobic004G071650 Sobic004G221500 Sobic004G221500 Sobic010G084700--Sobic004G221500 Sobic010G084700--Sobic010G084100 Sobic010G117900 Sobic010G117900 Sobic010G084700--Sobic010G117900 Sobic002G184200 Sobic002G184200 Sobic010G084700--Sobic002G184200 Sobic010G176600 Sobic010G176600 Sobic010G084700--Sobic010G176600 Sobic003G286600 Sobic003G286600 Sobic010G084700--Sobic003G286600 Sobic001G348700 Sobic001G348700 Sobic010G084700--Sobic001G348700 Sobic001G423800 Sobic001G423800 Sobic010G084700--Sobic001G423800 Sobic001G192200 Sobic001G192200 Sobic010G084700--Sobic001G192200 Sobic010G084100--Sobic010G084700 Sobic010G084100--Sobic004G071650 Sobic005G045900 Sobic005G045900 Sobic010G084100--Sobic005G045900 Sobic010G084100--Sobic004G221500 Sobic010G084100--Sobic003G286600 Sobic010G084100--Sobic001G192200 Sobic010G084100--Sobic002G184200 Sobic007G067400 Sobic007G067400 Sobic010G084100--Sobic007G067400 Sobic006G099900 Sobic006G099900 Sobic010G084100--Sobic006G099900 Sobic004G243100 Sobic004G243100 Sobic002G251000--Sobic004G243100 Sobic001G318700 Sobic001G318700 Sobic002G251000--Sobic001G318700 Sobic002G251000--Sobic001G423800 Sobic001G231400 Sobic001G231400 Sobic002G251000--Sobic001G231400 Sobic001G018300 Sobic001G018300 Sobic002G251000--Sobic001G018300 Sobic002G251000--Sobic001G192200 Sobic003G282901 Sobic003G282901 Sobic002G251000--Sobic003G282901 Sobic002G140400 Sobic002G140400 Sobic002G251000--Sobic002G140400 Sobic004G189400 Sobic004G189400 Sobic002G251000--Sobic004G189400 Sobic005G101700--Sobic005G101600 Sobic001G318600 Sobic001G318600 Sobic005G101700--Sobic001G318600 Sobic003G200700 Sobic003G200700 Sobic005G101700--Sobic003G200700 Sobic007G227300 Sobic007G227300 Sobic005G101700--Sobic007G227300 Sobic005G101800 Sobic005G101800 Sobic005G101700--Sobic005G101800 Sobic001G400800 Sobic001G400800 Sobic005G101700--Sobic001G400800 Sobic010G084400 Sobic010G084400 Sobic005G101700--Sobic010G084400 Sobic005G101700--Sobic010G117900 Sobic004G148200 Sobic004G148200 Sobic005G101700--Sobic004G148200 Sobic006G153100 Sobic006G153100 Sobic005G179200--Sobic006G153100 Sobic003G117600 Sobic003G117600 Sobic005G179200--Sobic003G117600 Sobic005G206601 Sobic005G206601 Sobic005G179200--Sobic005G206601 Sobic005G179200--Sobic010G084700 Sobic001G444400 Sobic001G444400 Sobic005G179200--Sobic001G444400 Sobic005G063100 Sobic005G063100 Sobic005G179200--Sobic005G063100 Sobic005G179200--Sobic004G071650 Sobic005G051200 Sobic005G051200 Sobic005G179200--Sobic005G051200 Sobic005G179200--Sobic005G101700 Sobic006G148900--Sobic001G423800 Sobic006G148900--Sobic010G084700 Sobic006G148900--Sobic010G176600 Sobic006G148900--Sobic004G221500 Sobic001G177800 Sobic001G177800 Sobic006G148900--Sobic001G177800 Sobic006G148900--Sobic004G189400 Sobic006G148900--Sobic002G251000 Sobic006G148900--Sobic003G282901 Sobic004G216600 Sobic004G216600 Sobic006G148900--Sobic004G216600 Sobic001G050100--Sobic005G063100 Sobic001G367600 Sobic001G367600 Sobic001G050100--Sobic001G367600 Sobic001G050100--Sobic002G140400 Sobic005G018700 Sobic005G018700 Sobic001G050100--Sobic005G018700 Sobic004G237800 Sobic004G237800 Sobic001G050100--Sobic004G237800 Sobic006G103000 Sobic006G103000 Sobic001G050100--Sobic006G103000 Sobic001G050100--Sobic001G192200 Sobic005G091500 Sobic005G091500 Sobic001G050100--Sobic005G091500 Sobic001G050100--Sobic010G176600 Sobic005G101600--Sobic005G101700 Sobic005G101600--Sobic001G318600 Sobic005G101600--Sobic001G400800 Sobic005G101600--Sobic007G227300 Sobic005G101600--Sobic005G206601 Sobic005G101600--Sobic005G101800 Sobic005G101600--Sobic010G084400 Sobic003G437100 Sobic003G437100 Sobic005G101600--Sobic003G437100 Sobic005G101600--Sobic003G200700 Sobic004G071650--Sobic010G084100 Sobic004G071650--Sobic010G084700 Sobic003G116800 Sobic003G116800 Sobic004G071650--Sobic003G116800 Sobic004G071650--Sobic005G045900 Sobic004G071650--Sobic003G286600 Sobic004G071650--Sobic001G348700 Sobic004G071650--Sobic004G221500 Sobic004G071650--Sobic005G206601 Sobic001G487300 Sobic001G487300 Sobic004G071650--Sobic001G487300
Octagon: transcription factors


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