Gene annotation
Transcriptome id Sobic.008G184201.1
Synonym -
Functional annotation -
UniProt A0A1Z5R8K0
Pfam PF00150
Panther DB PTHR31451 PTHR31451:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G66460 : Glycosyl hydrolase superfamily protein
RAP-DB (Rice) LOC_Os01g47400.1 : OsMan01 - Endo-Beta-Mannanase, expressed
MaizeGDB (Corn) Zm00025a028148
Brachypodium KQK09058
Barley HORVU3Hr1G060060.1 , HORVU3Hr1G060060.3 , HORVU3Hr1G060060.2 , HORVU3Hr1G060060.5 , HORVU3Hr1G060060.4 , HORVU3Hr1G060060.6 , HORVU3Hr1G060060.8 , HORVU3Hr1G060060.7
Wheat TraesCS3B02G269200 , TraesCS3A02G241000 , TraesCS3D02G241300 , TraesCS3D02G241300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G064100 DNA-binding storekeeper protein-related, putative, expressed -
2 Sobic.006G246700 MBTB57 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
3 Sobic.002G392550 - -
4 Sobic.003G063801 - -
5 Sobic.003G255000 no apical meristem protein, putative, expressed -
6 Sobic.002G250700 DC1 domain-containing protein, putative, expressed -
7 Sobic.009G225250 - -
8 Sobic.008G043000 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed K08066: NFYC, nuclear transcription factor Y, gamma
9 Sobic.010G142132 - -
10 Sobic.010G133100 expressed protein K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
11 Sobic.004G204700 OsFBX230 - F-box domain containing protein, expressed -
12 Sobic.002G291850 - -
13 Sobic.009G067700 ZOS1-19 - C2H2 zinc finger protein, expressed -
14 Sobic.007G151650 - -
15 Sobic.010G174550 - -
16 Sobic.010G151325 - -
17 Sobic.005G045400 - -
18 Sobic.006G142365 - -
19 Sobic.004G113500 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
20 Sobic.006G025132 - -


Gene co-expression network
sample Sobic008G184201 Sobic008G184201 Sobic002G064100 Sobic002G064100 Sobic008G184201--Sobic002G064100 Sobic006G246700 Sobic006G246700 Sobic008G184201--Sobic006G246700 Sobic002G392550 Sobic002G392550 Sobic008G184201--Sobic002G392550 Sobic003G063801 Sobic003G063801 Sobic008G184201--Sobic003G063801 Sobic003G255000 Sobic003G255000 Sobic008G184201--Sobic003G255000 Sobic002G250700 Sobic002G250700 Sobic008G184201--Sobic002G250700 Sobic009G225250 Sobic009G225250 Sobic008G184201--Sobic009G225250 Sobic008G043000 Sobic008G043000 Sobic008G184201--Sobic008G043000 Sobic010G142132 Sobic010G142132 Sobic008G184201--Sobic010G142132 Sobic002G064100--Sobic010G142132 Sobic004G204700 Sobic004G204700 Sobic002G064100--Sobic004G204700 Sobic002G064100--Sobic009G225250 Sobic009G067700 Sobic009G067700 Sobic002G064100--Sobic009G067700 Sobic002G064100--Sobic002G250700 Sobic002G064100--Sobic008G043000 Sobic009G128901 Sobic009G128901 Sobic002G064100--Sobic009G128901 Sobic002G291850 Sobic002G291850 Sobic002G064100--Sobic002G291850 Sobic006G176300 Sobic006G176300 Sobic002G064100--Sobic006G176300 Sobic007G151650 Sobic007G151650 Sobic006G246700--Sobic007G151650 Sobic010G151325 Sobic010G151325 Sobic006G246700--Sobic010G151325 Sobic004G113500 Sobic004G113500 Sobic006G246700--Sobic004G113500 Sobic008G146801 Sobic008G146801 Sobic006G246700--Sobic008G146801 Sobic001G374301 Sobic001G374301 Sobic006G246700--Sobic001G374301 Sobic005G017632 Sobic005G017632 Sobic006G246700--Sobic005G017632 Sobic001G018700 Sobic001G018700 Sobic006G246700--Sobic001G018700 Sobic002G392550--Sobic003G255000 Sobic002G392550--Sobic003G063801 Sobic002G392550--Sobic008G043000 Sobic005G002350 Sobic005G002350 Sobic002G392550--Sobic005G002350 Sobic002G392550--Sobic009G225250 Sobic002G392550--Sobic002G250700 Sobic002G392550--Sobic002G064100 Sobic010G133100 Sobic010G133100 Sobic002G392550--Sobic010G133100 Sobic002G392550--Sobic004G204700 Sobic003G063801--Sobic002G064100 Sobic003G063801--Sobic010G142132 Sobic003G063801--Sobic009G225250 Sobic002G146701 Sobic002G146701 Sobic003G063801--Sobic002G146701 Sobic003G063801--Sobic008G043000 Sobic003G063801--Sobic002G250700 Sobic003G063801--Sobic010G133100 Sobic003G063801--Sobic004G204700 Sobic003G063801--Sobic002G392550 Sobic003G255000--Sobic008G043000 Sobic003G255000--Sobic009G225250 Sobic003G255000--Sobic002G250700 Sobic003G255000--Sobic002G392550 Sobic003G255000--Sobic005G002350 Sobic003G255000--Sobic004G204700 Sobic008G172900 Sobic008G172900 Sobic003G255000--Sobic008G172900 Sobic009G080500 Sobic009G080500 Sobic003G255000--Sobic009G080500 Sobic003G255000--Sobic003G063801 Sobic002G250700--Sobic009G225250 Sobic002G250700--Sobic008G043000 Sobic002G250700--Sobic004G204700 Sobic002G250700--Sobic003G255000 Sobic002G250700--Sobic002G064100 Sobic002G250700--Sobic009G067700 Sobic002G250700--Sobic002G291850 Sobic002G250700--Sobic008G172900 Sobic002G250700--Sobic005G002350 Sobic009G225250--Sobic008G043000 Sobic009G225250--Sobic002G250700 Sobic009G225250--Sobic004G204700 Sobic009G225250--Sobic003G255000 Sobic009G225250--Sobic002G064100 Sobic009G225250--Sobic008G172900 Sobic009G225250--Sobic009G067700 Sobic009G225250--Sobic002G291850 Sobic009G225250--Sobic005G002350 Sobic008G043000--Sobic009G225250 Sobic008G043000--Sobic002G250700 Sobic008G043000--Sobic004G204700 Sobic008G043000--Sobic003G255000 Sobic008G043000--Sobic005G002350 Sobic008G043000--Sobic008G172900 Sobic008G043000--Sobic002G064100 Sobic008G043000--Sobic009G080500 Sobic008G043000--Sobic002G291850 Sobic007G221300 Sobic007G221300 Sobic010G142132--Sobic007G221300 Sobic010G142132--Sobic006G176300 Sobic010G142132--Sobic009G067700 Sobic010G142132--Sobic001G018700
Octagon: transcription factors


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