Gene annotation
Transcriptome id Sobic.008G189000.1
Synonym Sb08g022965
Functional annotation -
UniProt A0A1B6PEK4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a004855
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G196200 myosin heavy chain-related, putative, expressed -
2 Sobic.006G213200 expressed protein -
3 Sobic.003G430000 eukaryotic aspartyl protease domain containing protein, expressed -
4 Sobic.005G146300 Ser/Thr protein phosphatase family protein, putative, expressed K14379: tartrate-resistant acid phosphatase type 5
5 Sobic.002G201100 ZF-HD protein dimerisation region containing protein, expressed -
6 Sobic.005G142900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.004G170600 GDSL-like lipase/acylhydrolase, putative, expressed -
8 Sobic.009G056400 fasciclin domain containing protein, expressed -
9 Sobic.003G262650 - -
10 Sobic.007G163800 is the major stem height gene(PubMedID : 20585750)@Candidate for recessive d2 dwarfing gene(PubMedID : 20464438)@"domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by IAA treatment"(PubMedID : 20528920)@"reduce the internode length, especially in the middle internodes IV-VII. decreased the cell proliferation rates"(PubMedID : 27329702)@"ATP-binding cassette type B (ABCB1), family of multidrug resistant (MDR), class of P-glycoproteins"(PubMedID : 29126242)@"auxin efflux carrier, PGP19"(PubMedID : 14526073)@Candidate gene for leaf angle (PubMedID : 26323882)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
11 Sobic.003G333000 LTPL65 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
12 Sobic.007G033300 plastocyanin-like domain containing protein, putative, expressed -
13 Sobic.001G358900 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
14 Sobic.001G442800 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
15 Sobic.002G003200 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.001G250200 glycerol-3-phosphate acyltransferase, putative, expressed -
17 Sobic.003G352800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Protein L-ascorbate oxidase precursor (Os)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
18 Sobic.005G032000 anthocyanin 5-O-glucosyltransferase, putative, expressed -
19 Sobic.001G275800 peptide transporter PTR2, putative, expressed -
20 Sobic.004G006100 cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic008G189000 Sobic008G189000 Sobic009G196200 Sobic009G196200 Sobic008G189000--Sobic009G196200 Sobic006G213200 Sobic006G213200 Sobic008G189000--Sobic006G213200 Sobic003G430000 Sobic003G430000 Sobic008G189000--Sobic003G430000 Sobic005G146300 Sobic005G146300 Sobic008G189000--Sobic005G146300 Sobic002G201100 Sobic002G201100 Sobic008G189000--Sobic002G201100 Sobic005G142900 Sobic005G142900 Sobic008G189000--Sobic005G142900 Sobic004G170600 Sobic004G170600 Sobic008G189000--Sobic004G170600 Sobic009G056400 Sobic009G056400 Sobic008G189000--Sobic009G056400 Sobic003G262650 Sobic003G262650 Sobic008G189000--Sobic003G262650 Sobic009G196200--Sobic002G201100 Sobic006G001400 Sobic006G001400 Sobic009G196200--Sobic006G001400 Sobic003G333000 Sobic003G333000 Sobic009G196200--Sobic003G333000 Sobic004G300800 Sobic004G300800 Sobic009G196200--Sobic004G300800 Sobic006G060500 Sobic006G060500 Sobic009G196200--Sobic006G060500 Sobic001G275800 Sobic001G275800 Sobic009G196200--Sobic001G275800 Sobic003G157500 Sobic003G157500 Sobic009G196200--Sobic003G157500 Sobic005G020200 Sobic005G020200 Sobic009G196200--Sobic005G020200 Sobic005G196500 Sobic005G196500 Sobic009G196200--Sobic005G196500 Sobic006G141100 Sobic006G141100 Sobic006G213200--Sobic006G141100 Sobic006G213200--Sobic008G189000 Sobic001G490700 Sobic001G490700 Sobic006G213200--Sobic001G490700 Sobic007G005200 Sobic007G005200 Sobic006G213200--Sobic007G005200 Sobic004G066100 Sobic004G066100 Sobic006G213200--Sobic004G066100 Sobic002G430400 Sobic002G430400 Sobic006G213200--Sobic002G430400 Sobic004G046001 Sobic004G046001 Sobic006G213200--Sobic004G046001 Sobic001G490800 Sobic001G490800 Sobic006G213200--Sobic001G490800 Sobic001G442800 Sobic001G442800 Sobic006G213200--Sobic001G442800 Sobic006G166800 Sobic006G166800 Sobic003G430000--Sobic006G166800 Sobic003G352800 Sobic003G352800 Sobic003G430000--Sobic003G352800 Sobic003G430000--Sobic005G146300 Sobic007G027200 Sobic007G027200 Sobic003G430000--Sobic007G027200 Sobic007G033300 Sobic007G033300 Sobic003G430000--Sobic007G033300 Sobic010G196400 Sobic010G196400 Sobic003G430000--Sobic010G196400 Sobic009G162800 Sobic009G162800 Sobic003G430000--Sobic009G162800 Sobic010G199700 Sobic010G199700 Sobic003G430000--Sobic010G199700 Sobic001G510200 Sobic001G510200 Sobic003G430000--Sobic001G510200 Sobic005G146300--Sobic007G033300 Sobic001G066900 Sobic001G066900 Sobic005G146300--Sobic001G066900 Sobic009G031400 Sobic009G031400 Sobic005G146300--Sobic009G031400 Sobic004G341300 Sobic004G341300 Sobic005G146300--Sobic004G341300 Sobic002G039400 Sobic002G039400 Sobic005G146300--Sobic002G039400 Sobic003G045700 Sobic003G045700 Sobic005G146300--Sobic003G045700 Sobic001G441700 Sobic001G441700 Sobic005G146300--Sobic001G441700 Sobic005G146300--Sobic003G430000 Sobic003G183800 Sobic003G183800 Sobic005G146300--Sobic003G183800 Sobic002G201100--Sobic003G333000 Sobic002G201100--Sobic009G196200 Sobic002G201100--Sobic006G001400 Sobic009G055900 Sobic009G055900 Sobic002G201100--Sobic009G055900 Sobic010G107200 Sobic010G107200 Sobic002G201100--Sobic010G107200 Sobic005G227050 Sobic005G227050 Sobic002G201100--Sobic005G227050 Sobic002G201100--Sobic005G196500 Sobic009G154100 Sobic009G154100 Sobic002G201100--Sobic009G154100 Sobic002G201100--Sobic005G020200 Sobic001G228300 Sobic001G228300 Sobic005G142900--Sobic001G228300 Sobic005G142900--Sobic001G275800 Sobic001G061600 Sobic001G061600 Sobic005G142900--Sobic001G061600 Sobic003G283100 Sobic003G283100 Sobic005G142900--Sobic003G283100 Sobic001G164200 Sobic001G164200 Sobic005G142900--Sobic001G164200 Sobic001G138000 Sobic001G138000 Sobic005G142900--Sobic001G138000 Sobic007G182600 Sobic007G182600 Sobic005G142900--Sobic007G182600 Sobic005G218100 Sobic005G218100 Sobic005G142900--Sobic005G218100 Sobic001G182300 Sobic001G182300 Sobic005G142900--Sobic001G182300 Sobic004G170600--Sobic009G056400 Sobic004G170600--Sobic001G138000 Sobic006G263800 Sobic006G263800 Sobic004G170600--Sobic006G263800 Sobic002G190100 Sobic002G190100 Sobic004G170600--Sobic002G190100 Sobic004G170600--Sobic009G196200 Sobic002G064400 Sobic002G064400 Sobic004G170600--Sobic002G064400 Sobic001G142400 Sobic001G142400 Sobic004G170600--Sobic001G142400 Sobic004G006100 Sobic004G006100 Sobic004G170600--Sobic004G006100 Sobic001G120000 Sobic001G120000 Sobic004G170600--Sobic001G120000 Sobic009G056400--Sobic004G170600 Sobic009G056400--Sobic003G352800 Sobic006G139300 Sobic006G139300 Sobic009G056400--Sobic006G139300 Sobic005G088500 Sobic005G088500 Sobic009G056400--Sobic005G088500 Sobic005G135700 Sobic005G135700 Sobic009G056400--Sobic005G135700 Sobic002G003200 Sobic002G003200 Sobic009G056400--Sobic002G003200 Sobic009G056400--Sobic009G196200 Sobic009G056400--Sobic006G166800 Sobic009G056400--Sobic007G027200 Sobic003G262650--Sobic002G201100 Sobic009G161100 Sobic009G161100 Sobic003G262650--Sobic009G161100 Sobic007G060900 Sobic007G060900 Sobic003G262650--Sobic007G060900 Sobic003G262650--Sobic009G196200 Sobic003G262650--Sobic004G006100 Sobic003G262650--Sobic001G228300 Sobic003G262650--Sobic005G142900 Sobic002G124100 Sobic002G124100 Sobic003G262650--Sobic002G124100 Sobic001G412200 Sobic001G412200 Sobic003G262650--Sobic001G412200
Octagon: transcription factors


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