Gene annotation
Transcriptome id Sobic.009G149000.1
Synonym
Functional annotation peptide transporter PTR2, putative, expressed
UniProt A0A1B6P8T4
Pfam -
Panther DB PTHR11654 PTHR11654:SF94
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT1G22570 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os01g65100.1 : peptide transporter, putative, expressed
MaizeGDB (Corn) Zm00025a043865 , Zm00025a037322
Brachypodium KQK06084
Barley HORVU3Hr1G047780.1 , HORVU0Hr1G033190.1 , HORVU1Hr1G043140.1 , HORVU1Hr1G074450.1 , HORVU1Hr1G074550.6 , HORVU1Hr1G074550.7 , HORVU1Hr1G074550.5 , HORVU1Hr1G074550.2 , HORVU1Hr1G074550.8 , HORVU1Hr1G074550.9 , HORVU4Hr1G024090.1 , HORVU1Hr1G074490.3 , HORVU1Hr1G074490.2 , HORVU1Hr1G074490.1 , HORVU1Hr1G074490.6 , HORVU1Hr1G074490.8 , HORVU7Hr1G054040.1 , HORVU6Hr1G046920.1 , HORVU7Hr1G031040.1 , HORVU1Hr1G074550.10 , HORVU1Hr1G074450.4 , HORVU1Hr1G074450.3 , HORVU1Hr1G074450.2
Wheat TraesCS1A02G269600 , TraesCS1B02G280100 , TraesCS1D02G269700
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G164700 expressed protein -
2 Sobic.005G228250 - -
3 Sobic.009G126200 - -
4 Sobic.001G308900 zinc finger, C3HC4 type domain containing protein, expressed K15691: E3 ubiquitin-protein ligase RFWD3
5 Sobic.004G282200 DUF623 domain containing protein, expressed -
6 Sobic.004G020150 - -
7 Sobic.002G124832 - -
8 Sobic.003G155700 transcription initiation factor IID, 18kD subunit family protein, expressed K03127: transcription initiation factor TFIID subunit 13
9 Sobic.009G250600 OsFBX35 - F-box domain containing protein, expressed -
10 Sobic.010G246300 Zinc finger, C3HC4 type domain containing protein, expressed -
11 Sobic.003G165401 - -
12 Sobic.002G172300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.008G004500 MRH1, putative, expressed -
14 Sobic.002G069300 DNA binding protein, putative, expressed -
15 Sobic.006G142925 - -
16 Sobic.009G239400 LTPL29 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
17 Sobic.007G072700 - -
18 Sobic.003G137000 zinc finger, C3HC4 type domain containing protein, expressed -
19 Sobic.005G119300 - -
20 Sobic.001G309666 - -


Gene co-expression network
sample Sobic009G149000 Sobic009G149000 Sobic001G164700 Sobic001G164700 Sobic009G149000--Sobic001G164700 Sobic005G228250 Sobic005G228250 Sobic009G149000--Sobic005G228250 Sobic009G126200 Sobic009G126200 Sobic009G149000--Sobic009G126200 Sobic001G308900 Sobic001G308900 Sobic009G149000--Sobic001G308900 Sobic004G282200 Sobic004G282200 Sobic009G149000--Sobic004G282200 Sobic004G020150 Sobic004G020150 Sobic009G149000--Sobic004G020150 Sobic002G124832 Sobic002G124832 Sobic009G149000--Sobic002G124832 Sobic003G155700 Sobic003G155700 Sobic009G149000--Sobic003G155700 Sobic009G250600 Sobic009G250600 Sobic009G149000--Sobic009G250600 Sobic010G090850 Sobic010G090850 Sobic001G164700--Sobic010G090850 Sobic001G297900 Sobic001G297900 Sobic001G164700--Sobic001G297900 Sobic010G246300 Sobic010G246300 Sobic001G164700--Sobic010G246300 Sobic002G055000 Sobic002G055000 Sobic001G164700--Sobic002G055000 Sobic001G480900 Sobic001G480900 Sobic001G164700--Sobic001G480900 Sobic008G030801 Sobic008G030801 Sobic001G164700--Sobic008G030801 Sobic002G266700 Sobic002G266700 Sobic001G164700--Sobic002G266700 Sobic010G011500 Sobic010G011500 Sobic001G164700--Sobic010G011500 Sobic003G089500 Sobic003G089500 Sobic001G164700--Sobic003G089500 Sobic005G228250--Sobic009G126200 Sobic008G004500 Sobic008G004500 Sobic005G228250--Sobic008G004500 Sobic005G133750 Sobic005G133750 Sobic005G228250--Sobic005G133750 Sobic002G382200 Sobic002G382200 Sobic005G228250--Sobic002G382200 Sobic010G143666 Sobic010G143666 Sobic005G228250--Sobic010G143666 Sobic002G202050 Sobic002G202050 Sobic005G228250--Sobic002G202050 Sobic009G126200--Sobic005G228250 Sobic006G142925 Sobic006G142925 Sobic009G126200--Sobic006G142925 Sobic009G019400 Sobic009G019400 Sobic009G126200--Sobic009G019400 Sobic002G069300 Sobic002G069300 Sobic009G126200--Sobic002G069300 Sobic003G281000 Sobic003G281000 Sobic009G126200--Sobic003G281000 Sobic009G126200--Sobic010G143666 Sobic009G126200--Sobic002G382200 Sobic009G239400 Sobic009G239400 Sobic009G126200--Sobic009G239400 Sobic009G126200--Sobic005G133750 Sobic001G308900--Sobic008G030801 Sobic003G229900 Sobic003G229900 Sobic001G308900--Sobic003G229900 Sobic006G049633 Sobic006G049633 Sobic001G308900--Sobic006G049633 Sobic002G172300 Sobic002G172300 Sobic001G308900--Sobic002G172300 Sobic001G308900--Sobic002G055000 Sobic001G308900--Sobic002G266700 Sobic001G308900--Sobic001G297900 Sobic001G308900--Sobic010G011500 Sobic006G161200 Sobic006G161200 Sobic001G308900--Sobic006G161200 Sobic004G264800 Sobic004G264800 Sobic004G282200--Sobic004G264800 Sobic007G072700 Sobic007G072700 Sobic004G282200--Sobic007G072700 Sobic001G371650 Sobic001G371650 Sobic004G282200--Sobic001G371650 Sobic007G156400 Sobic007G156400 Sobic004G282200--Sobic007G156400 Sobic007G032200 Sobic007G032200 Sobic004G282200--Sobic007G032200 Sobic004G282200--Sobic008G030801 Sobic004G282200--Sobic002G172300 Sobic004G282200--Sobic009G239400 Sobic004G282200--Sobic004G020150 Sobic004G020150--Sobic009G239400 Sobic008G140500 Sobic008G140500 Sobic004G020150--Sobic008G140500 Sobic004G020150--Sobic006G142925 Sobic003G165401 Sobic003G165401 Sobic004G020150--Sobic003G165401 Sobic007G127900 Sobic007G127900 Sobic004G020150--Sobic007G127900 Sobic004G020150--Sobic002G069300 Sobic008G069100 Sobic008G069100 Sobic004G020150--Sobic008G069100 Sobic004G102600 Sobic004G102600 Sobic004G020150--Sobic004G102600 Sobic003G137000 Sobic003G137000 Sobic004G020150--Sobic003G137000 Sobic002G124832--Sobic003G137000 Sobic002G124832--Sobic003G165401 Sobic002G124832--Sobic002G069300 Sobic002G014100 Sobic002G014100 Sobic002G124832--Sobic002G014100 Sobic002G124832--Sobic006G142925 Sobic002G124832--Sobic010G143666 Sobic002G124832--Sobic003G281000 Sobic002G124832--Sobic008G140500 Sobic002G124832--Sobic002G202050 Sobic003G155700--Sobic010G143666 Sobic003G155700--Sobic002G014100 Sobic003G155700--Sobic003G281000 Sobic003G155700--Sobic002G202050 Sobic006G247200 Sobic006G247200 Sobic003G155700--Sobic006G247200 Sobic002G344800 Sobic002G344800 Sobic003G155700--Sobic002G344800 Sobic001G180700 Sobic001G180700 Sobic009G250600--Sobic001G180700 Sobic003G175050 Sobic003G175050 Sobic009G250600--Sobic003G175050 Sobic001G252600 Sobic001G252600 Sobic009G250600--Sobic001G252600 Sobic004G178550 Sobic004G178550 Sobic009G250600--Sobic004G178550 Sobic009G250600--Sobic002G069300 Sobic009G250600--Sobic002G014100 Sobic009G250600--Sobic010G143666 Sobic009G250600--Sobic006G142925 Sobic005G046600 Sobic005G046600 Sobic009G250600--Sobic005G046600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.