Gene annotation
Transcriptome id Sobic.009G226250.1
Synonym -
Functional annotation -
UniProt A0A1Z5R3P6
Pfam -
Panther DB PTHR10209 PTHR10209:SF216
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G13400 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RAP-DB (Rice) LOC_Os05g48230.1 : expressed protein
MaizeGDB (Corn) Zm00025a036557
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G226200 expressed protein -
2 Sobic.003G308100 CSLC1 - cellulose synthase-like family C, expressed -
3 Sobic.010G156100 GDSL-like lipase/acylhydrolase, putative, expressed -
4 Sobic.001G480700 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
5 Sobic.009G151100 serine/threonine-protein kinase, putative, expressed -
6 Sobic.003G283400 GDSL-like lipase/acylhydrolase, putative, expressed -
7 Sobic.004G000700 SbANS is not expressed during fungal or MeJA-induced 3-deoxyanthocyanidin accumulation(PubMedID : 20529887)@leucoanthocyanidin dioxygenase, putative, expressed K05277: anthocyanidin synthase
8 Sobic.009G226100 expressed protein -
9 Sobic.002G428000 expressed protein -
10 Sobic.008G171100 GDSL-like lipase/acylhydrolase, putative, expressed -
11 Sobic.003G365800 expressed protein -
12 Sobic.006G028800 Ser/Thr protein kinase, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
13 Sobic.003G136400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidyl-prolyl cis-trans isomerase, putative, expressed K03768: PPIB, peptidyl-prolyl cis-trans isomerase B (cyclophilin B)
14 Sobic.005G104100 peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.003G179800 - -
16 Sobic.002G078000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@KHG/KDPG aldolase, putative, expressed -
17 Sobic.006G249100 expressed protein -
18 Sobic.002G033000 GDSL-like lipase/acylhydrolase, putative, expressed -
19 Sobic.003G078300 leucine-rich repeat protein-related, putative, expressed -
20 Sobic.001G512200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic009G226250 Sobic009G226250 Sobic009G226200 Sobic009G226200 Sobic009G226250--Sobic009G226200 Sobic003G308100 Sobic003G308100 Sobic009G226250--Sobic003G308100 Sobic010G156100 Sobic010G156100 Sobic009G226250--Sobic010G156100 Sobic001G480700 Sobic001G480700 Sobic009G226250--Sobic001G480700 Sobic009G151100 Sobic009G151100 Sobic009G226250--Sobic009G151100 Sobic003G283400 Sobic003G283400 Sobic009G226250--Sobic003G283400 Sobic004G000700 Sobic004G000700 Sobic009G226250--Sobic004G000700 Sobic009G226100 Sobic009G226100 Sobic009G226250--Sobic009G226100 Sobic002G428000 Sobic002G428000 Sobic009G226250--Sobic002G428000 Sobic009G226200--Sobic010G156100 Sobic009G226200--Sobic003G308100 Sobic009G226200--Sobic003G283400 Sobic009G226200--Sobic009G226250 Sobic004G344100 Sobic004G344100 Sobic009G226200--Sobic004G344100 Sobic009G226200--Sobic009G151100 Sobic009G226200--Sobic002G428000 Sobic003G365800 Sobic003G365800 Sobic009G226200--Sobic003G365800 Sobic002G078000 Sobic002G078000 Sobic009G226200--Sobic002G078000 Sobic003G308100--Sobic010G156100 Sobic003G308100--Sobic003G365800 Sobic003G142100 Sobic003G142100 Sobic003G308100--Sobic003G142100 Sobic003G308100--Sobic003G283400 Sobic006G111100 Sobic006G111100 Sobic003G308100--Sobic006G111100 Sobic004G101200 Sobic004G101200 Sobic003G308100--Sobic004G101200 Sobic003G383700 Sobic003G383700 Sobic003G308100--Sobic003G383700 Sobic001G271600 Sobic001G271600 Sobic003G308100--Sobic001G271600 Sobic001G495500 Sobic001G495500 Sobic003G308100--Sobic001G495500 Sobic010G156100--Sobic003G308100 Sobic010G156100--Sobic006G111100 Sobic010G156100--Sobic001G495500 Sobic010G156100--Sobic003G142100 Sobic010G156100--Sobic003G283400 Sobic010G156100--Sobic003G365800 Sobic004G072900 Sobic004G072900 Sobic010G156100--Sobic004G072900 Sobic006G123200 Sobic006G123200 Sobic010G156100--Sobic006G123200 Sobic010G156100--Sobic009G151100 Sobic002G329500 Sobic002G329500 Sobic001G480700--Sobic002G329500 Sobic001G003600 Sobic001G003600 Sobic001G480700--Sobic001G003600 Sobic003G096100 Sobic003G096100 Sobic001G480700--Sobic003G096100 Sobic004G179900 Sobic004G179900 Sobic001G480700--Sobic004G179900 Sobic008G066700 Sobic008G066700 Sobic001G480700--Sobic008G066700 Sobic003G058600 Sobic003G058600 Sobic001G480700--Sobic003G058600 Sobic001G435600 Sobic001G435600 Sobic001G480700--Sobic001G435600 Sobic004G060700 Sobic004G060700 Sobic001G480700--Sobic004G060700 Sobic009G115050 Sobic009G115050 Sobic001G480700--Sobic009G115050 Sobic009G151100--Sobic003G365800 Sobic009G151100--Sobic010G156100 Sobic009G151100--Sobic003G283400 Sobic009G151100--Sobic003G308100 Sobic009G216300 Sobic009G216300 Sobic009G151100--Sobic009G216300 Sobic009G151100--Sobic002G428000 Sobic009G151100--Sobic004G000700 Sobic003G078300 Sobic003G078300 Sobic009G151100--Sobic003G078300 Sobic008G075200 Sobic008G075200 Sobic009G151100--Sobic008G075200 Sobic003G283400--Sobic003G365800 Sobic005G104100 Sobic005G104100 Sobic003G283400--Sobic005G104100 Sobic003G283400--Sobic003G142100 Sobic003G283400--Sobic010G156100 Sobic003G283400--Sobic003G308100 Sobic003G283400--Sobic001G271600 Sobic009G129700 Sobic009G129700 Sobic003G283400--Sobic009G129700 Sobic003G283400--Sobic004G344100 Sobic002G341700 Sobic002G341700 Sobic003G283400--Sobic002G341700 Sobic003G230900 Sobic003G230900 Sobic004G000700--Sobic003G230900 Sobic008G171600 Sobic008G171600 Sobic004G000700--Sobic008G171600 Sobic001G249600 Sobic001G249600 Sobic004G000700--Sobic001G249600 Sobic004G000700--Sobic009G151100 Sobic004G000700--Sobic010G156100 Sobic006G227000 Sobic006G227000 Sobic004G000700--Sobic006G227000 Sobic004G000700--Sobic004G179900 Sobic004G000700--Sobic002G428000 Sobic004G000700--Sobic001G480700 Sobic001G215300 Sobic001G215300 Sobic009G226100--Sobic001G215300 Sobic001G021500 Sobic001G021500 Sobic009G226100--Sobic001G021500 Sobic003G042100 Sobic003G042100 Sobic009G226100--Sobic003G042100 Sobic002G124100 Sobic002G124100 Sobic009G226100--Sobic002G124100 Sobic008G008500 Sobic008G008500 Sobic009G226100--Sobic008G008500 Sobic004G243400 Sobic004G243400 Sobic009G226100--Sobic004G243400 Sobic007G090415 Sobic007G090415 Sobic009G226100--Sobic007G090415 Sobic003G165800 Sobic003G165800 Sobic009G226100--Sobic003G165800 Sobic004G109000 Sobic004G109000 Sobic009G226100--Sobic004G109000 Sobic001G389600 Sobic001G389600 Sobic002G428000--Sobic001G389600 Sobic002G403000 Sobic002G403000 Sobic002G428000--Sobic002G403000 Sobic002G428000--Sobic003G283400 Sobic002G428000--Sobic009G151100 Sobic001G478100 Sobic001G478100 Sobic002G428000--Sobic001G478100 Sobic007G142300 Sobic007G142300 Sobic002G428000--Sobic007G142300 Sobic010G165100 Sobic010G165100 Sobic002G428000--Sobic010G165100 Sobic009G235700 Sobic009G235700 Sobic002G428000--Sobic009G235700 Sobic002G428000--Sobic004G344100
Octagon: transcription factors


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