Gene annotation
Transcriptome id Sobic.006G028800.1,Sobic.006G028800.2
Synonym SNC4
Functional annotation Ser/Thr protein kinase, putative, expressed
UniProt A0A1B6PJP6 , A0A1Z5RCV6
Pfam PF01657 PF07714
Panther DB PTHR27009
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology K04730; interleukin-1 receptor-associated kinase 1
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G66980 : suppressor of npr1-1 constitutive 4
RAP-DB (Rice) LOC_Os04g09770.1 : Ser/Thr protein kinase, putative, expressed
MaizeGDB (Corn) Zm00025a023540
Brachypodium -
Barley HORVU5Hr1G075150.9 , HORVU5Hr1G075150.1 , HORVU5Hr1G075150.2
Wheat TraesCS5B02G277000 , TraesCS5D02G284500 , TraesCS5A02G277200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G345800 zinc-binding protein, putative, expressed -
2 Sobic.007G064100 - -
3 Sobic.002G349600 ubiquitin-like protein SMT3, putative, expressed K12160: SUMO, small ubiquitin-related modifier
4 Sobic.005G074700 LTPL32 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.003G415700 gamma-thionin family domain containing protein, expressed -
6 Sobic.006G194800 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
7 Sobic.005G141700 - -
8 Sobic.006G238300 - -
9 Sobic.006G227100 leucoanthocyanidin reductase, putative, expressed K08695: anthocyanidin reductase
10 Sobic.001G495500 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
11 Sobic.007G047000 hypothetical protein -
12 Sobic.002G250800 response regulator receiver domain containing protein, expressed K14492: two-component response regulator ARR-A family
13 Sobic.003G274000 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
14 Sobic.001G235100 MYB family transcription factor, putative, expressed -
15 Sobic.010G119100 - -
16 Sobic.006G111100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@pathogenesis-related Bet v I family protein, putative, expressed -
17 Sobic.010G156100 GDSL-like lipase/acylhydrolase, putative, expressed -
18 Sobic.007G109000 response regulator receiver domain containing protein, expressed K14492: two-component response regulator ARR-A family
19 Sobic.002G076600 rc - bHLH transcription factor regulating proanthocyanidin production in seeds, expressed -
20 Sobic.002G352401 - -


Gene co-expression network
sample Sobic006G028800 Sobic006G028800 Sobic001G345800 Sobic001G345800 Sobic006G028800--Sobic001G345800 Sobic007G064100 Sobic007G064100 Sobic006G028800--Sobic007G064100 Sobic002G349600 Sobic002G349600 Sobic006G028800--Sobic002G349600 Sobic005G074700 Sobic005G074700 Sobic006G028800--Sobic005G074700 Sobic003G415700 Sobic003G415700 Sobic006G028800--Sobic003G415700 Sobic006G194800 Sobic006G194800 Sobic006G028800--Sobic006G194800 Sobic005G141700 Sobic005G141700 Sobic006G028800--Sobic005G141700 Sobic006G238300 Sobic006G238300 Sobic006G028800--Sobic006G238300 Sobic006G227100 Sobic006G227100 Sobic006G028800--Sobic006G227100 Sobic001G345800--Sobic002G349600 Sobic001G345800--Sobic006G194800 Sobic001G345800--Sobic005G141700 Sobic001G345800--Sobic003G415700 Sobic001G345800--Sobic006G238300 Sobic002G332600 Sobic002G332600 Sobic001G345800--Sobic002G332600 Sobic007G041000 Sobic007G041000 Sobic001G345800--Sobic007G041000 Sobic002G352401 Sobic002G352401 Sobic001G345800--Sobic002G352401 Sobic004G315900 Sobic004G315900 Sobic001G345800--Sobic004G315900 Sobic006G111100 Sobic006G111100 Sobic007G064100--Sobic006G111100 Sobic004G101200 Sobic004G101200 Sobic007G064100--Sobic004G101200 Sobic003G274000 Sobic003G274000 Sobic007G064100--Sobic003G274000 Sobic001G235100 Sobic001G235100 Sobic007G064100--Sobic001G235100 Sobic002G121900 Sobic002G121900 Sobic007G064100--Sobic002G121900 Sobic003G374100 Sobic003G374100 Sobic007G064100--Sobic003G374100 Sobic007G064100--Sobic006G028800 Sobic010G156100 Sobic010G156100 Sobic007G064100--Sobic010G156100 Sobic001G495500 Sobic001G495500 Sobic007G064100--Sobic001G495500 Sobic002G349600--Sobic005G141700 Sobic002G349600--Sobic006G194800 Sobic002G349600--Sobic001G345800 Sobic002G349600--Sobic003G415700 Sobic002G349600--Sobic007G041000 Sobic002G349600--Sobic002G352401 Sobic002G349600--Sobic002G332600 Sobic005G147100 Sobic005G147100 Sobic002G349600--Sobic005G147100 Sobic010G010500 Sobic010G010500 Sobic002G349600--Sobic010G010500 Sobic007G109000 Sobic007G109000 Sobic005G074700--Sobic007G109000 Sobic007G047000 Sobic007G047000 Sobic005G074700--Sobic007G047000 Sobic009G039000 Sobic009G039000 Sobic005G074700--Sobic009G039000 Sobic004G017700 Sobic004G017700 Sobic005G074700--Sobic004G017700 Sobic010G119100 Sobic010G119100 Sobic005G074700--Sobic010G119100 Sobic002G250800 Sobic002G250800 Sobic005G074700--Sobic002G250800 Sobic002G345600 Sobic002G345600 Sobic005G074700--Sobic002G345600 Sobic010G069800 Sobic010G069800 Sobic005G074700--Sobic010G069800 Sobic005G152932 Sobic005G152932 Sobic005G074700--Sobic005G152932 Sobic003G415700--Sobic006G238300 Sobic005G152700 Sobic005G152700 Sobic003G415700--Sobic005G152700 Sobic003G415700--Sobic002G349600 Sobic004G090400 Sobic004G090400 Sobic003G415700--Sobic004G090400 Sobic002G345500 Sobic002G345500 Sobic003G415700--Sobic002G345500 Sobic003G415700--Sobic002G352401 Sobic006G144101 Sobic006G144101 Sobic003G415700--Sobic006G144101 Sobic004G221700 Sobic004G221700 Sobic003G415700--Sobic004G221700 Sobic003G411100 Sobic003G411100 Sobic003G415700--Sobic003G411100 Sobic010G191450 Sobic010G191450 Sobic006G194800--Sobic010G191450 Sobic006G194800--Sobic002G349600 Sobic006G194800--Sobic002G332600 Sobic006G194800--Sobic007G041000 Sobic006G194800--Sobic005G141700 Sobic004G221600 Sobic004G221600 Sobic006G194800--Sobic004G221600 Sobic006G194800--Sobic002G352401 Sobic005G223300 Sobic005G223300 Sobic006G194800--Sobic005G223300 Sobic006G194800--Sobic004G315900 Sobic005G141700--Sobic002G349600 Sobic005G147200 Sobic005G147200 Sobic005G141700--Sobic005G147200 Sobic005G221100 Sobic005G221100 Sobic005G141700--Sobic005G221100 Sobic005G223000 Sobic005G223000 Sobic005G141700--Sobic005G223000 Sobic008G045650 Sobic008G045650 Sobic005G141700--Sobic008G045650 Sobic010G191500 Sobic010G191500 Sobic005G141700--Sobic010G191500 Sobic005G141700--Sobic002G332600 Sobic005G145900 Sobic005G145900 Sobic005G141700--Sobic005G145900 Sobic005G141700--Sobic005G147100 Sobic006G238300--Sobic003G415700 Sobic006G238300--Sobic005G152700 Sobic005G200400 Sobic005G200400 Sobic006G238300--Sobic005G200400 Sobic002G162100 Sobic002G162100 Sobic006G238300--Sobic002G162100 Sobic006G238300--Sobic004G090400 Sobic006G238300--Sobic006G144101 Sobic006G238300--Sobic002G352401 Sobic005G153300 Sobic005G153300 Sobic006G238300--Sobic005G153300 Sobic006G238300--Sobic002G345500 Sobic009G039200 Sobic009G039200 Sobic006G227100--Sobic009G039200 Sobic005G098300 Sobic005G098300 Sobic006G227100--Sobic005G098300 Sobic006G227100--Sobic005G147100 Sobic008G188300 Sobic008G188300 Sobic006G227100--Sobic008G188300 Sobic006G227100--Sobic010G010500 Sobic006G227100--Sobic005G223000 Sobic008G120200 Sobic008G120200 Sobic006G227100--Sobic008G120200 Sobic006G227100--Sobic005G221100 Sobic006G227100--Sobic010G191500
Octagon: transcription factors


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