Gene annotation
Transcriptome id Sobic.007G064100.1
Synonym
Functional annotation -
UniProt A0A1B6PFY5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G111100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@pathogenesis-related Bet v I family protein, putative, expressed -
2 Sobic.004G101200 meiosis 5, putative, expressed -
3 Sobic.003G274000 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
4 Sobic.001G235100 MYB family transcription factor, putative, expressed -
5 Sobic.002G121900 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2
6 Sobic.003G374100 beta-galactosidase precursor, putative, expressed -
7 Sobic.006G028800 Ser/Thr protein kinase, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
8 Sobic.010G156100 GDSL-like lipase/acylhydrolase, putative, expressed -
9 Sobic.001G495500 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
10 Sobic.010G204700 LTPL129 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
11 Sobic.009G219500 dehydrogenase/reductase SDR family member 2, putative, expressed K11147: dehydrogenase/reductase SDR family member 4
12 Sobic.009G125200 GASR6 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
13 Sobic.002G027100 ZOS1-07 - C2H2 zinc finger protein, expressed -
14 Sobic.007G043000 transcription factor X1, putative, expressed -
15 Sobic.003G308100 CSLC1 - cellulose synthase-like family C, expressed -
16 Sobic.001G137800 ankyrin, putative, expressed -
17 Sobic.002G076600 rc - bHLH transcription factor regulating proanthocyanidin production in seeds, expressed -
18 Sobic.002G263000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
19 Sobic.005G020100 CDC45B - Putative DNA replication initiation protein, expressed K06628: cell division control protein 45
20 Sobic.003G088600 transcription factor X1, putative, expressed -


Gene co-expression network
sample Sobic007G064100 Sobic007G064100 Sobic006G111100 Sobic006G111100 Sobic007G064100--Sobic006G111100 Sobic004G101200 Sobic004G101200 Sobic007G064100--Sobic004G101200 Sobic003G274000 Sobic003G274000 Sobic007G064100--Sobic003G274000 Sobic001G235100 Sobic001G235100 Sobic007G064100--Sobic001G235100 Sobic002G121900 Sobic002G121900 Sobic007G064100--Sobic002G121900 Sobic003G374100 Sobic003G374100 Sobic007G064100--Sobic003G374100 Sobic006G028800 Sobic006G028800 Sobic007G064100--Sobic006G028800 Sobic010G156100 Sobic010G156100 Sobic007G064100--Sobic010G156100 Sobic001G495500 Sobic001G495500 Sobic007G064100--Sobic001G495500 Sobic006G111100--Sobic003G374100 Sobic006G111100--Sobic003G274000 Sobic006G111100--Sobic002G121900 Sobic006G111100--Sobic010G156100 Sobic006G111100--Sobic004G101200 Sobic004G072900 Sobic004G072900 Sobic006G111100--Sobic004G072900 Sobic001G152901 Sobic001G152901 Sobic006G111100--Sobic001G152901 Sobic001G287900 Sobic001G287900 Sobic006G111100--Sobic001G287900 Sobic001G137800 Sobic001G137800 Sobic006G111100--Sobic001G137800 Sobic009G219500 Sobic009G219500 Sobic004G101200--Sobic009G219500 Sobic004G101200--Sobic006G111100 Sobic004G101200--Sobic001G137800 Sobic001G235200 Sobic001G235200 Sobic004G101200--Sobic001G235200 Sobic006G213900 Sobic006G213900 Sobic004G101200--Sobic006G213900 Sobic004G101200--Sobic003G374100 Sobic002G076600 Sobic002G076600 Sobic004G101200--Sobic002G076600 Sobic004G101200--Sobic001G235100 Sobic003G129200 Sobic003G129200 Sobic004G101200--Sobic003G129200 Sobic008G031000 Sobic008G031000 Sobic003G274000--Sobic008G031000 Sobic006G131100 Sobic006G131100 Sobic003G274000--Sobic006G131100 Sobic003G411100 Sobic003G411100 Sobic003G274000--Sobic003G411100 Sobic008G048600 Sobic008G048600 Sobic003G274000--Sobic008G048600 Sobic001G324600 Sobic001G324600 Sobic003G274000--Sobic001G324600 Sobic003G274000--Sobic001G287900 Sobic006G144101 Sobic006G144101 Sobic003G274000--Sobic006G144101 Sobic004G014700 Sobic004G014700 Sobic003G274000--Sobic004G014700 Sobic002G345500 Sobic002G345500 Sobic003G274000--Sobic002G345500 Sobic007G043000 Sobic007G043000 Sobic001G235100--Sobic007G043000 Sobic004G254100 Sobic004G254100 Sobic001G235100--Sobic004G254100 Sobic008G138200 Sobic008G138200 Sobic001G235100--Sobic008G138200 Sobic001G235100--Sobic002G121900 Sobic001G235100--Sobic001G137800 Sobic001G235100--Sobic006G213900 Sobic001G235100--Sobic001G235200 Sobic003G063700 Sobic003G063700 Sobic001G235100--Sobic003G063700 Sobic001G216400 Sobic001G216400 Sobic001G235100--Sobic001G216400 Sobic002G121900--Sobic007G043000 Sobic002G121900--Sobic001G287900 Sobic002G121900--Sobic001G137800 Sobic007G128200 Sobic007G128200 Sobic002G121900--Sobic007G128200 Sobic002G121900--Sobic001G235100 Sobic007G193300 Sobic007G193300 Sobic002G121900--Sobic007G193300 Sobic002G121900--Sobic008G138200 Sobic002G121900--Sobic003G374100 Sobic001G171200 Sobic001G171200 Sobic002G121900--Sobic001G171200 Sobic003G374100--Sobic001G137800 Sobic006G228000 Sobic006G228000 Sobic003G374100--Sobic006G228000 Sobic003G374100--Sobic003G129200 Sobic003G374100--Sobic007G043000 Sobic003G374100--Sobic002G121900 Sobic004G234600 Sobic004G234600 Sobic003G374100--Sobic004G234600 Sobic002G053350 Sobic002G053350 Sobic003G374100--Sobic002G053350 Sobic003G374100--Sobic001G235200 Sobic003G374100--Sobic001G235100 Sobic001G345800 Sobic001G345800 Sobic006G028800--Sobic001G345800 Sobic006G028800--Sobic007G064100 Sobic002G349600 Sobic002G349600 Sobic006G028800--Sobic002G349600 Sobic005G074700 Sobic005G074700 Sobic006G028800--Sobic005G074700 Sobic003G415700 Sobic003G415700 Sobic006G028800--Sobic003G415700 Sobic006G194800 Sobic006G194800 Sobic006G028800--Sobic006G194800 Sobic005G141700 Sobic005G141700 Sobic006G028800--Sobic005G141700 Sobic006G238300 Sobic006G238300 Sobic006G028800--Sobic006G238300 Sobic006G227100 Sobic006G227100 Sobic006G028800--Sobic006G227100 Sobic003G308100 Sobic003G308100 Sobic010G156100--Sobic003G308100 Sobic010G156100--Sobic006G111100 Sobic010G156100--Sobic001G495500 Sobic003G142100 Sobic003G142100 Sobic010G156100--Sobic003G142100 Sobic003G283400 Sobic003G283400 Sobic010G156100--Sobic003G283400 Sobic003G365800 Sobic003G365800 Sobic010G156100--Sobic003G365800 Sobic010G156100--Sobic004G072900 Sobic006G123200 Sobic006G123200 Sobic010G156100--Sobic006G123200 Sobic009G151100 Sobic009G151100 Sobic010G156100--Sobic009G151100 Sobic001G495500--Sobic010G156100 Sobic001G495500--Sobic003G274000 Sobic001G495500--Sobic006G227100 Sobic009G125200 Sobic009G125200 Sobic001G495500--Sobic009G125200 Sobic005G151400 Sobic005G151400 Sobic001G495500--Sobic005G151400 Sobic002G027100 Sobic002G027100 Sobic001G495500--Sobic002G027100 Sobic001G495500--Sobic006G111100 Sobic001G495500--Sobic006G131100 Sobic005G179700 Sobic005G179700 Sobic001G495500--Sobic005G179700
Octagon: transcription factors


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