Gene annotation
Transcriptome id Sobic.001G480700.1
Synonym Sb01g045000, AHA10
Functional annotation plasma membrane ATPase, putative, expressed
UniProt A0A1B6QQ55
Pfam PF00690 PF00702 PF00122
Panther DB PTHR24093 PTHR24093:SF355
NCBI CDD -
KEGG Orthology K01535; PMA1, H+-transporting ATPase
Gene Ontology GO:0000166; nucleotide binding


Orthologs (automatic annotation)
TAIR AT1G17260 : autoinhibited H(+)-ATPase isoform 10
RAP-DB (Rice) LOC_Os03g08560.1 : plasma membrane ATPase, putative, expressed
MaizeGDB (Corn) Zm00025a049797 , Zm00025a032923 , Zm00025a051359 , Zm00025a042055
Brachypodium PNT69345 , PNT76376 , KQK23282 , KQK01162
Barley HORVU7Hr1G114340.10 , HORVU4Hr1G077430.9 , HORVU4Hr1G077430.8 , HORVU4Hr1G077430.1 , HORVU4Hr1G077430.3 , HORVU4Hr1G077430.2 , HORVU4Hr1G077430.4 , HORVU4Hr1G077430.7 , HORVU4Hr1G077430.6 , HORVU4Hr1G077430.11 , HORVU4Hr1G077430.10 , HORVU0Hr1G017350.8 , HORVU0Hr1G017350.9 , HORVU0Hr1G017350.6 , HORVU0Hr1G017350.7 , HORVU0Hr1G017350.4 , HORVU0Hr1G017350.5 , HORVU0Hr1G017350.2 , HORVU0Hr1G017350.3 , HORVU0Hr1G017350.1 , HORVU7Hr1G114340.8 , HORVU7Hr1G114340.9 , HORVU7Hr1G114340.4 , HORVU7Hr1G114340.5 , HORVU7Hr1G114340.6 , HORVU7Hr1G114340.7 , HORVU7Hr1G114340.1 , HORVU7Hr1G114340.2 , HORVU7Hr1G114340.3
Wheat TraesCS4B02G300000 , TraesCS4B02G300000 , TraesCS1B02G268800 , TraesCS7D02G146700 , TraesCS6B02G393400 , TraesCS4D02G298900 , TraesCS4D02G298900 , TraesCS4D02G298900 , TraesCS4D02G298900 , TraesCS4A02G005000 , TraesCS7D02G500200 , TraesCS7A02G145400 , TraesCS6D02G344000 , TraesCS7B02G421700 , TraesCS4A02G005000 , TraesCS7A02G510800 , TraesCS7B02G047600 , TraesCS6A02G360500
Populus PNT54867 , PNT54866 , PNT54865 , PNT54864 , PNT54870 , PNT54869 , PNT54868


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G329500 Beta amylase BAM (Zm)(PubMedID : 27208977)@beta-amylase, putative, expressed K01177: beta-amylase
2 Sobic.001G003600 GDSL-like lipase/acylhydrolase, putative, expressed -
3 Sobic.003G096100 auxin-induced protein 5NG4, putative, expressed -
4 Sobic.004G179900 Not investigated(PubMedID : 23766026)@dehydration-responsive element-binding protein, putative, expressed -
5 Sobic.008G066700 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.003G058600 cytochrome P450, putative, expressed -
7 Sobic.001G435600 - -
8 Sobic.004G060700 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
9 Sobic.009G115050 - -
10 Sobic.001G127700 possible lysine decarboxylase domain containing protein, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
11 Sobic.007G170800 Fatty acyl CoA reductase 1 FAR1 (At)(PubMedID : 27208977)@male sterility protein 2, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
12 Sobic.006G172700 LTPL122 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.004G105800 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.007G009600 expressed protein -
15 Sobic.008G123600 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase
16 Sobic.001G394250 - -
17 Sobic.002G033000 GDSL-like lipase/acylhydrolase, putative, expressed -
18 Sobic.004G000700 SbANS is not expressed during fungal or MeJA-induced 3-deoxyanthocyanidin accumulation(PubMedID : 20529887)@leucoanthocyanidin dioxygenase, putative, expressed K05277: anthocyanidin synthase
19 Sobic.004G263000 expressed protein -
20 Sobic.005G110436 - -


Gene co-expression network
sample Sobic001G480700 Sobic001G480700 Sobic002G329500 Sobic002G329500 Sobic001G480700--Sobic002G329500 Sobic001G003600 Sobic001G003600 Sobic001G480700--Sobic001G003600 Sobic003G096100 Sobic003G096100 Sobic001G480700--Sobic003G096100 Sobic004G179900 Sobic004G179900 Sobic001G480700--Sobic004G179900 Sobic008G066700 Sobic008G066700 Sobic001G480700--Sobic008G066700 Sobic003G058600 Sobic003G058600 Sobic001G480700--Sobic003G058600 Sobic001G435600 Sobic001G435600 Sobic001G480700--Sobic001G435600 Sobic004G060700 Sobic004G060700 Sobic001G480700--Sobic004G060700 Sobic009G115050 Sobic009G115050 Sobic001G480700--Sobic009G115050 Sobic002G329500--Sobic009G115050 Sobic002G415400 Sobic002G415400 Sobic002G329500--Sobic002G415400 Sobic002G329500--Sobic001G435600 Sobic002G415300 Sobic002G415300 Sobic002G329500--Sobic002G415300 Sobic002G329500--Sobic001G003600 Sobic002G329500--Sobic004G060700 Sobic001G127700 Sobic001G127700 Sobic002G329500--Sobic001G127700 Sobic002G329500--Sobic003G058600 Sobic004G076000 Sobic004G076000 Sobic002G329500--Sobic004G076000 Sobic006G172700 Sobic006G172700 Sobic001G003600--Sobic006G172700 Sobic002G020100 Sobic002G020100 Sobic001G003600--Sobic002G020100 Sobic001G003600--Sobic009G115050 Sobic001G003600--Sobic003G096100 Sobic001G003600--Sobic004G076000 Sobic001G003600--Sobic001G435600 Sobic001G003600--Sobic002G329500 Sobic001G003600--Sobic003G058600 Sobic005G110436 Sobic005G110436 Sobic001G003600--Sobic005G110436 Sobic003G096100--Sobic001G003600 Sobic003G096100--Sobic006G172700 Sobic001G366500 Sobic001G366500 Sobic003G096100--Sobic001G366500 Sobic009G059100 Sobic009G059100 Sobic003G096100--Sobic009G059100 Sobic003G096100--Sobic001G435600 Sobic003G096100--Sobic003G058600 Sobic003G074600 Sobic003G074600 Sobic003G096100--Sobic003G074600 Sobic003G096100--Sobic002G020100 Sobic003G096100--Sobic005G110436 Sobic004G179900--Sobic001G480700 Sobic004G000700 Sobic004G000700 Sobic004G179900--Sobic004G000700 Sobic004G179900--Sobic003G058600 Sobic006G249100 Sobic006G249100 Sobic004G179900--Sobic006G249100 Sobic001G497100 Sobic001G497100 Sobic004G179900--Sobic001G497100 Sobic005G200600 Sobic005G200600 Sobic004G179900--Sobic005G200600 Sobic003G157500 Sobic003G157500 Sobic004G179900--Sobic003G157500 Sobic006G253900 Sobic006G253900 Sobic004G179900--Sobic006G253900 Sobic004G253800 Sobic004G253800 Sobic004G179900--Sobic004G253800 Sobic002G033000 Sobic002G033000 Sobic008G066700--Sobic002G033000 Sobic004G263000 Sobic004G263000 Sobic008G066700--Sobic004G263000 Sobic001G519400 Sobic001G519400 Sobic008G066700--Sobic001G519400 Sobic010G037600 Sobic010G037600 Sobic008G066700--Sobic010G037600 Sobic008G123600 Sobic008G123600 Sobic008G066700--Sobic008G123600 Sobic008G066700--Sobic002G329500 Sobic001G357200 Sobic001G357200 Sobic008G066700--Sobic001G357200 Sobic008G066700--Sobic004G060700 Sobic002G314800 Sobic002G314800 Sobic008G066700--Sobic002G314800 Sobic003G058600--Sobic004G060700 Sobic003G058600--Sobic001G003600 Sobic003G058600--Sobic001G435600 Sobic003G058600--Sobic009G115050 Sobic007G009600 Sobic007G009600 Sobic003G058600--Sobic007G009600 Sobic003G058600--Sobic002G329500 Sobic003G058600--Sobic006G172700 Sobic003G058600--Sobic002G415400 Sobic003G058600--Sobic002G415300 Sobic001G435600--Sobic002G415300 Sobic001G435600--Sobic002G415400 Sobic001G435600--Sobic004G060700 Sobic002G416950 Sobic002G416950 Sobic001G435600--Sobic002G416950 Sobic001G435600--Sobic009G115050 Sobic001G435600--Sobic002G329500 Sobic008G163200 Sobic008G163200 Sobic001G435600--Sobic008G163200 Sobic001G435600--Sobic001G003600 Sobic007G170800 Sobic007G170800 Sobic001G435600--Sobic007G170800 Sobic004G060700--Sobic002G416950 Sobic004G060700--Sobic002G415300 Sobic004G060700--Sobic007G170800 Sobic004G060700--Sobic007G009600 Sobic004G060700--Sobic008G163200 Sobic004G060700--Sobic002G415400 Sobic004G060700--Sobic001G435600 Sobic006G238100 Sobic006G238100 Sobic004G060700--Sobic006G238100 Sobic001G379300 Sobic001G379300 Sobic004G060700--Sobic001G379300 Sobic009G115050--Sobic002G329500 Sobic009G115050--Sobic001G003600 Sobic009G115050--Sobic002G415400 Sobic009G115050--Sobic001G435600 Sobic009G115050--Sobic002G415300 Sobic009G115050--Sobic004G076000 Sobic009G115050--Sobic005G110436 Sobic009G115050--Sobic001G127700 Sobic009G115050--Sobic002G020100
Octagon: transcription factors


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