Gene annotation
Transcriptome id Sobic.010G078500.1
Synonym
Functional annotation -
UniProt A0A194YHX2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G049475 - -
2 Sobic.008G085350 - -
3 Sobic.003G366100 expressed protein -
4 Sobic.005G045200 homeobox domain containing protein, expressed -
5 Sobic.004G122100 - -
6 Sobic.003G378301 - K17362: acyl-coenzyme A thioesterase 13
7 Sobic.K044407 - -
8 Sobic.003G310200 ctr copper transporter family protein, putative, expressed K14686: SLC31A1, solute carrier family 31 (copper transporter), member 1
9 Sobic.007G025900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
10 Sobic.009G023401 - -
11 Sobic.007G089300 TKL_IRAK_DUF26-lc.7 - DUF26 kinases have homology to DUF26 containing loci, expressed -
12 Sobic.006G168000 AP2 domain containing protein, expressed K09286: EREBP-like factor
13 Sobic.004G217700 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein
14 Sobic.001G012000 cytochrome P450 71E1, putative, expressed K13029: 4-hydroxyphenylacetaldehyde oxime monooxygenase
15 Sobic.001G056400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed K13222: BX1, indole-3-glycerol-phosphate lyase
16 Sobic.008G181801 - -
17 Sobic.004G220600 phenylalanine ammonia-lyase, putative, expressed K10775: phenylalanine ammonia-lyase
18 Sobic.005G218500 Jacalin-like lectin domain containing protein, putative, expressed -
19 Sobic.002G041800 gibberellin receptor GID1L2, putative, expressed -
20 Sobic.002G423600 "Expressed in drought, cold and heat"(PubMedID : 29862293)@similar to WSI76 protein induced by water stress(PubMedID : 29862293)@glycosyl transferase 8 domain containing protein, putative, expressed K18819: inositol 3-alpha-galactosyltransferase


Gene co-expression network
sample Sobic010G078500 Sobic010G078500 Sobic005G049475 Sobic005G049475 Sobic010G078500--Sobic005G049475 Sobic008G085350 Sobic008G085350 Sobic010G078500--Sobic008G085350 Sobic003G366100 Sobic003G366100 Sobic010G078500--Sobic003G366100 Sobic005G045200 Sobic005G045200 Sobic010G078500--Sobic005G045200 Sobic004G122100 Sobic004G122100 Sobic010G078500--Sobic004G122100 Sobic003G378301 Sobic003G378301 Sobic010G078500--Sobic003G378301 SobicK044407 SobicK044407 Sobic010G078500--SobicK044407 Sobic003G310200 Sobic003G310200 Sobic010G078500--Sobic003G310200 Sobic007G025900 Sobic007G025900 Sobic010G078500--Sobic007G025900 Sobic005G049475--Sobic010G078500 Sobic004G220600 Sobic004G220600 Sobic005G049475--Sobic004G220600 Sobic006G168000 Sobic006G168000 Sobic005G049475--Sobic006G168000 Sobic005G049475--Sobic008G085350 Sobic003G138400 Sobic003G138400 Sobic005G049475--Sobic003G138400 Sobic010G273700 Sobic010G273700 Sobic005G049475--Sobic010G273700 Sobic003G423200 Sobic003G423200 Sobic005G049475--Sobic003G423200 Sobic005G049475--Sobic003G378301 Sobic005G049475--Sobic003G366100 Sobic008G085350--SobicK044407 Sobic008G085350--Sobic003G378301 Sobic006G045000 Sobic006G045000 Sobic008G085350--Sobic006G045000 Sobic001G012000 Sobic001G012000 Sobic008G085350--Sobic001G012000 Sobic001G056400 Sobic001G056400 Sobic008G085350--Sobic001G056400 Sobic005G133166 Sobic005G133166 Sobic008G085350--Sobic005G133166 Sobic008G181801 Sobic008G181801 Sobic008G085350--Sobic008G181801 Sobic002G423600 Sobic002G423600 Sobic008G085350--Sobic002G423600 Sobic001G233200 Sobic001G233200 Sobic008G085350--Sobic001G233200 Sobic008G060300 Sobic008G060300 Sobic003G366100--Sobic008G060300 Sobic003G366100--Sobic003G310200 Sobic007G089300 Sobic007G089300 Sobic003G366100--Sobic007G089300 Sobic002G173900 Sobic002G173900 Sobic003G366100--Sobic002G173900 Sobic005G193600 Sobic005G193600 Sobic003G366100--Sobic005G193600 Sobic002G202700 Sobic002G202700 Sobic003G366100--Sobic002G202700 Sobic003G366100--Sobic001G012000 Sobic003G366100--Sobic003G378301 Sobic010G130800 Sobic010G130800 Sobic003G366100--Sobic010G130800 Sobic005G045200--Sobic003G378301 Sobic004G068800 Sobic004G068800 Sobic005G045200--Sobic004G068800 Sobic006G060800 Sobic006G060800 Sobic005G045200--Sobic006G060800 Sobic005G045200--Sobic010G130800 Sobic004G217700 Sobic004G217700 Sobic005G045200--Sobic004G217700 Sobic005G045200--Sobic003G366100 Sobic001G145050 Sobic001G145050 Sobic005G045200--Sobic001G145050 Sobic005G045200--Sobic007G025900 Sobic003G410900 Sobic003G410900 Sobic005G045200--Sobic003G410900 Sobic004G122100--Sobic010G078500 Sobic004G122100--Sobic003G310200 Sobic004G122100--Sobic007G089300 Sobic001G136300 Sobic001G136300 Sobic004G122100--Sobic001G136300 Sobic002G041800 Sobic002G041800 Sobic004G122100--Sobic002G041800 Sobic004G122100--Sobic008G181801 Sobic004G122100--SobicK044407 Sobic001G362001 Sobic001G362001 Sobic004G122100--Sobic001G362001 Sobic004G122100--Sobic005G193600 Sobic003G378301--Sobic001G056400 Sobic003G378301--SobicK044407 Sobic003G378301--Sobic001G012000 Sobic003G378301--Sobic002G423600 Sobic003G378301--Sobic004G217700 Sobic005G182701 Sobic005G182701 Sobic003G378301--Sobic005G182701 Sobic003G378301--Sobic003G310200 Sobic003G378301--Sobic006G045000 Sobic007G055600 Sobic007G055600 Sobic003G378301--Sobic007G055600 SobicK044407--Sobic001G012000 SobicK044407--Sobic001G056400 SobicK044407--Sobic008G181801 SobicK044407--Sobic006G045000 SobicK044407--Sobic003G378301 SobicK044407--Sobic003G310200 SobicK044407--Sobic005G182701 SobicK044407--Sobic002G423600 SobicK044407--Sobic007G055600 Sobic003G310200--SobicK044407 Sobic003G310200--Sobic001G012000 Sobic003G310200--Sobic003G378301 Sobic003G310200--Sobic001G056400 Sobic003G310200--Sobic008G181801 Sobic003G310200--Sobic006G045000 Sobic003G310200--Sobic002G423600 Sobic003G310200--Sobic004G217700 Sobic003G310200--Sobic010G130800 Sobic004G099700 Sobic004G099700 Sobic007G025900--Sobic004G099700 Sobic002G201900 Sobic002G201900 Sobic007G025900--Sobic002G201900 Sobic006G065900 Sobic006G065900 Sobic007G025900--Sobic006G065900 Sobic007G025900--Sobic010G273700 Sobic005G119100 Sobic005G119100 Sobic007G025900--Sobic005G119100 Sobic007G025900--Sobic008G060300 Sobic007G025900--Sobic005G045200 Sobic007G025900--Sobic003G366100 Sobic001G404500 Sobic001G404500 Sobic007G025900--Sobic001G404500
Octagon: transcription factors


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