Gene annotation
Transcriptome id Sobic.010G222300.1
Synonym BPM1, Sb10g026760, ATBPM1
Functional annotation MBTB11 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
UniProt C5Z7P1
Pfam PF00651
Panther DB PTHR26379 PTHR26379:SF178
NCBI CDD -
KEGG Orthology K10523; speckle-type POZ protein
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G06190 : BTB-POZ and MATH domain 2
RAP-DB (Rice) LOC_Os06g45730.1 : MBTB11 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G377400 expressed protein -
2 Sobic.010G207175 - -
3 Sobic.002G319900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AAA family ATPase, putative, expressed K08900: mitochondrial chaperone BCS1
4 Sobic.001G152150 - -
5 Sobic.009G217450 - -
6 Sobic.007G014500 NB-ARC domain containing protein, expressed -
7 Sobic.004G248000 expressed protein -
8 Sobic.009G134700 - -
9 Sobic.006G210266 - -
10 Sobic.010G002600 methyltransferase, putative, expressed -
11 Sobic.006G193801 - -
12 Sobic.008G040201 - K13100: pre-mRNA-splicing factor CWC22
13 Sobic.003G267150 - -
14 Sobic.007G179100 - -
15 Sobic.004G313000 leucine rich repeat containing protein, expressed -
16 Sobic.002G160500 - K07466: RFA1, RPA1, replication factor A1
17 Sobic.002G160500 - K07466: RFA1, RPA1, replication factor A1
18 Sobic.002G160500 - K07466: RFA1, RPA1, replication factor A1
19 Sobic.002G160500 - K07466: RFA1, RPA1, replication factor A1
20 Sobic.002G160500 - K07466: RFA1, RPA1, replication factor A1


Gene co-expression network
sample Sobic010G222300 Sobic010G222300 Sobic001G377400 Sobic001G377400 Sobic010G222300--Sobic001G377400 Sobic010G207175 Sobic010G207175 Sobic010G222300--Sobic010G207175 Sobic002G319900 Sobic002G319900 Sobic010G222300--Sobic002G319900 Sobic001G152150 Sobic001G152150 Sobic010G222300--Sobic001G152150 Sobic009G217450 Sobic009G217450 Sobic010G222300--Sobic009G217450 Sobic007G014500 Sobic007G014500 Sobic010G222300--Sobic007G014500 Sobic004G248000 Sobic004G248000 Sobic010G222300--Sobic004G248000 Sobic009G134700 Sobic009G134700 Sobic010G222300--Sobic009G134700 Sobic006G210266 Sobic006G210266 Sobic010G222300--Sobic006G210266 Sobic001G377400--Sobic004G248000 Sobic001G377400--Sobic002G319900 Sobic003G267150 Sobic003G267150 Sobic001G377400--Sobic003G267150 Sobic004G313000 Sobic004G313000 Sobic001G377400--Sobic004G313000 Sobic002G160500 Sobic002G160500 Sobic001G377400--Sobic002G160500 Sobic007G179100 Sobic007G179100 Sobic010G207175--Sobic007G179100 Sobic006G243300 Sobic006G243300 Sobic010G207175--Sobic006G243300 Sobic001G163500 Sobic001G163500 Sobic010G207175--Sobic001G163500 Sobic010G166850 Sobic010G166850 Sobic010G207175--Sobic010G166850 Sobic010G207175--Sobic006G210266 Sobic010G156300 Sobic010G156300 Sobic010G207175--Sobic010G156300 Sobic009G258800 Sobic009G258800 Sobic010G207175--Sobic009G258800 Sobic009G158150 Sobic009G158150 Sobic010G207175--Sobic009G158150 Sobic008G041500 Sobic008G041500 Sobic010G207175--Sobic008G041500 Sobic002G319900--Sobic003G267150 Sobic002G319900--Sobic002G160500 Sobic004G262550 Sobic004G262550 Sobic002G319900--Sobic004G262550 Sobic002G319900--Sobic004G313000 Sobic009G091940 Sobic009G091940 Sobic002G319900--Sobic009G091940 Sobic009G102550 Sobic009G102550 Sobic001G152150--Sobic009G102550 Sobic008G040201 Sobic008G040201 Sobic001G152150--Sobic008G040201 Sobic004G073232 Sobic004G073232 Sobic001G152150--Sobic004G073232 Sobic001G291701 Sobic001G291701 Sobic001G152150--Sobic001G291701 Sobic004G103450 Sobic004G103450 Sobic001G152150--Sobic004G103450 Sobic001G152150--Sobic009G217450 Sobic001G152150--Sobic006G210266 Sobic001G314350 Sobic001G314350 Sobic001G152150--Sobic001G314350 Sobic002G104450 Sobic002G104450 Sobic001G152150--Sobic002G104450 Sobic009G217450--Sobic004G103450 Sobic009G217450--Sobic008G040201 Sobic009G217450--Sobic001G291701 Sobic009G217450--Sobic001G152150 Sobic009G217450--Sobic009G102550 Sobic009G217450--Sobic004G073232 Sobic004G301250 Sobic004G301250 Sobic009G217450--Sobic004G301250 Sobic006G193801 Sobic006G193801 Sobic009G217450--Sobic006G193801 Sobic009G217450--Sobic001G314350 Sobic007G014500--Sobic002G319900 Sobic007G014500--Sobic004G262550 Sobic007G014500--Sobic003G267150 Sobic007G014500--Sobic002G160500 Sobic007G014500--Sobic004G313000 Sobic004G248000--Sobic002G160500 Sobic004G248000--Sobic004G313000 Sobic004G248000--Sobic003G267150 Sobic004G248000--Sobic004G262550 Sobic004G248000--Sobic002G319900 Sobic005G041150 Sobic005G041150 Sobic009G134700--Sobic005G041150 Sobic006G159500 Sobic006G159500 Sobic009G134700--Sobic006G159500 Sobic009G115800 Sobic009G115800 Sobic009G134700--Sobic009G115800 Sobic003G261766 Sobic003G261766 Sobic009G134700--Sobic003G261766 Sobic006G083050 Sobic006G083050 Sobic009G134700--Sobic006G083050 Sobic005G216833 Sobic005G216833 Sobic009G134700--Sobic005G216833 Sobic009G134700--Sobic007G179100 Sobic009G134700--Sobic002G319900 Sobic009G134700--Sobic004G313000 Sobic006G210266--Sobic001G314350 Sobic006G210266--Sobic010G207175 Sobic006G210266--Sobic001G163500 Sobic002G312550 Sobic002G312550 Sobic006G210266--Sobic002G312550 Sobic006G210266--Sobic006G243300 Sobic006G210266--Sobic001G152150 Sobic006G210266--Sobic007G179100 Sobic006G210266--Sobic010G166850 Sobic006G210266--Sobic008G040201
Octagon: transcription factors


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