Gene annotation
Transcriptome id Sobic.010G002600.4,Sobic.010G002600.3,Sobic.010G002600.1
Synonym Sb10g000440
Functional annotation methyltransferase, putative, expressed
UniProt C5Z236
Pfam PF03141
Panther DB PTHR10108 PTHR10108:SF801
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008168; methyltransferase activity


Orthologs (automatic annotation)
TAIR AT4G10440 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os06g01450.1 : methyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a003448 , Zm00025a041158
Brachypodium KQJ97881 , PNT76723 , KQK20050 , KQK20049 , KQK20048
Barley HORVU7Hr1G003860.2 , HORVU1Hr1G054470.3 , HORVU1Hr1G054470.1 , HORVU1Hr1G054470.4 , HORVU7Hr1G003860.8 , HORVU7Hr1G003860.3 , HORVU7Hr1G003860.1 , HORVU7Hr1G003860.6 , HORVU7Hr1G003860.7 , HORVU7Hr1G003860.4 , HORVU7Hr1G003860.5
Wheat TraesCS4A02G458100 , TraesCS4A02G458400 , TraesCS1A02G213400 , TraesCS7D02G027500 , TraesCS7A02G031100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G041500 - -
2 Sobic.009G035000 expressed protein -
3 Sobic.006G193801 - -
4 Sobic.006G192900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein kinase domain containing protein, expressed K04730: interleukin-1 receptor-associated kinase 1
5 Sobic.003G282400 OsMADS32 - MADS-box family gene with MIKCc type-box, expressed -
6 Sobic.004G181400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RING-H2 finger protein ATL3F, putative, expressed K16286: E3 ubiquitin-protein ligase EL5
7 Sobic.002G319900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AAA family ATPase, putative, expressed K08900: mitochondrial chaperone BCS1
8 Sobic.003G185000 agenet domain containing protein, expressed -
9 Sobic.001G163500 - -
10 Sobic.007G179100 - -
11 Sobic.003G129700 - -
12 Sobic.004G173300 expressed protein -
13 Sobic.006G009200 expressed protein -
14 Sobic.002G062400 - -
15 Sobic.004G093800 integral membrane protein, putative, expressed -
16 Sobic.003G267150 - -
17 Sobic.002G005900 - -
18 Sobic.008G142500 Leucine Rich Repeat family protein, expressed -
19 Sobic.008G108100 - -
20 Sobic.007G045750 - -


Gene co-expression network
sample Sobic010G002600 Sobic010G002600 Sobic008G041500 Sobic008G041500 Sobic010G002600--Sobic008G041500 Sobic009G035000 Sobic009G035000 Sobic010G002600--Sobic009G035000 Sobic006G193801 Sobic006G193801 Sobic010G002600--Sobic006G193801 Sobic006G192900 Sobic006G192900 Sobic010G002600--Sobic006G192900 Sobic003G282400 Sobic003G282400 Sobic010G002600--Sobic003G282400 Sobic004G181400 Sobic004G181400 Sobic010G002600--Sobic004G181400 Sobic002G319900 Sobic002G319900 Sobic010G002600--Sobic002G319900 Sobic003G185000 Sobic003G185000 Sobic010G002600--Sobic003G185000 Sobic001G163500 Sobic001G163500 Sobic010G002600--Sobic001G163500 Sobic008G041500--Sobic009G035000 Sobic008G041500--Sobic003G282400 Sobic007G179100 Sobic007G179100 Sobic008G041500--Sobic007G179100 Sobic008G041500--Sobic010G002600 Sobic002G062400 Sobic002G062400 Sobic008G041500--Sobic002G062400 Sobic008G041500--Sobic001G163500 Sobic010G156300 Sobic010G156300 Sobic008G041500--Sobic010G156300 Sobic003G129700 Sobic003G129700 Sobic008G041500--Sobic003G129700 Sobic007G045750 Sobic007G045750 Sobic008G041500--Sobic007G045750 Sobic009G035000--Sobic008G041500 Sobic009G035000--Sobic002G062400 Sobic009G035000--Sobic007G045750 Sobic009G035000--Sobic003G129700 Sobic006G009200 Sobic006G009200 Sobic009G035000--Sobic006G009200 Sobic009G035000--Sobic003G282400 Sobic009G035000--Sobic006G193801 Sobic009G035000--Sobic010G002600 Sobic009G035000--Sobic001G163500 Sobic002G005900 Sobic002G005900 Sobic006G193801--Sobic002G005900 Sobic006G193801--Sobic009G035000 Sobic006G193801--Sobic001G163500 Sobic006G193801--Sobic003G282400 Sobic006G193801--Sobic010G002600 Sobic006G193801--Sobic008G041500 Sobic006G193801--Sobic003G129700 Sobic008G040201 Sobic008G040201 Sobic006G193801--Sobic008G040201 Sobic006G193801--Sobic002G062400 Sobic010G241400 Sobic010G241400 Sobic006G192900--Sobic010G241400 Sobic006G192900--Sobic010G002600 Sobic002G307500 Sobic002G307500 Sobic006G192900--Sobic002G307500 Sobic006G192900--Sobic009G035000 Sobic006G192900--Sobic006G009200 Sobic006G192900--Sobic008G041500 Sobic006G192900--Sobic004G181400 Sobic004G093800 Sobic004G093800 Sobic006G192900--Sobic004G093800 Sobic006G192900--Sobic002G062400 Sobic003G282400--Sobic002G062400 Sobic003G282400--Sobic001G163500 Sobic003G282400--Sobic003G129700 Sobic003G282400--Sobic006G009200 Sobic003G282400--Sobic008G041500 Sobic003G282400--Sobic009G035000 Sobic003G282400--Sobic007G045750 Sobic003G282400--Sobic006G193801 Sobic009G158150 Sobic009G158150 Sobic003G282400--Sobic009G158150 Sobic004G181400--Sobic010G002600 Sobic004G181400--Sobic006G192900 Sobic004G181400--Sobic008G041500 Sobic004G181400--Sobic002G319900 Sobic004G181400--Sobic009G035000 Sobic003G267150 Sobic003G267150 Sobic004G181400--Sobic003G267150 Sobic004G149150 Sobic004G149150 Sobic004G181400--Sobic004G149150 Sobic008G108100 Sobic008G108100 Sobic004G181400--Sobic008G108100 Sobic004G173300 Sobic004G173300 Sobic004G181400--Sobic004G173300 Sobic002G319900--Sobic003G267150 Sobic002G160500 Sobic002G160500 Sobic002G319900--Sobic002G160500 Sobic004G262550 Sobic004G262550 Sobic002G319900--Sobic004G262550 Sobic004G313000 Sobic004G313000 Sobic002G319900--Sobic004G313000 Sobic009G091940 Sobic009G091940 Sobic002G319900--Sobic009G091940 Sobic003G185000--Sobic010G002600 Sobic003G185000--Sobic006G193801 Sobic001G291701 Sobic001G291701 Sobic003G185000--Sobic001G291701 Sobic003G185000--Sobic008G040201 Sobic003G185000--Sobic002G005900 Sobic007G126150 Sobic007G126150 Sobic003G185000--Sobic007G126150 Sobic003G185000--Sobic003G282400 Sobic003G185000--Sobic006G192900 Sobic003G185000--Sobic003G129700 Sobic001G163500--Sobic003G129700 Sobic001G163500--Sobic009G158150 Sobic001G163500--Sobic002G062400 Sobic001G163500--Sobic003G282400 Sobic001G163500--Sobic007G045750 Sobic001G163500--Sobic007G179100 Sobic001G163500--Sobic008G041500 Sobic002G312550 Sobic002G312550 Sobic001G163500--Sobic002G312550 Sobic001G163500--Sobic006G193801
Octagon: transcription factors


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