Gene annotation
Transcriptome id Sobic.010G252000.1
Synonym
Functional annotation -
UniProt A0A194YLC6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G182600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -
2 Sobic.001G164200 cytochrome P450, putative, expressed -
3 Sobic.008G013900 O-methyltransferase, putative, expressed -
4 Sobic.001G182300 GDSL-like lipase/acylhydrolase, putative, expressed -
5 Sobic.003G219000 integral membrane protein TmpA, putative, expressed -
6 Sobic.001G061600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidase M50, mammalian sterol-regulatory element binding protein, putative, expressed -
7 Sobic.009G102800 MRH1, putative, expressed -
8 Sobic.003G420800 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
9 Sobic.010G099300 - K03501: gidB, 16S rRNA (guanine527-N7)-methyltransferase
10 Sobic.008G124100 - -
11 Sobic.003G156766 - -
12 Sobic.003G176200 - -
13 Sobic.010G173900 expressed protein -
14 Sobic.004G151900 - -
15 Sobic.001G437801 - K04077: groEL, chaperonin GroEL
16 Sobic.008G049000 diacylglycerol O-acyltransferase, putative, expressed -
17 Sobic.002G094500 cytochrome P450, putative, expressed -
18 Sobic.001G040600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA topoisomerase 2, putative, expressed K02469: DNA gyrase subunit A
19 Sobic.005G148500 OsFBX402 - F-box domain containing protein, expressed -
20 Sobic.008G100400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"SMK1(Ortholog in maize:Li et al., 2014)"(PubMedID : 31659912)@tetratricopeptide-like helical, putative, expressed -


Gene co-expression network
sample Sobic010G252000 Sobic010G252000 Sobic007G182600 Sobic007G182600 Sobic010G252000--Sobic007G182600 Sobic001G164200 Sobic001G164200 Sobic010G252000--Sobic001G164200 Sobic008G013900 Sobic008G013900 Sobic010G252000--Sobic008G013900 Sobic001G182300 Sobic001G182300 Sobic010G252000--Sobic001G182300 Sobic003G219000 Sobic003G219000 Sobic010G252000--Sobic003G219000 Sobic001G061600 Sobic001G061600 Sobic010G252000--Sobic001G061600 Sobic009G102800 Sobic009G102800 Sobic010G252000--Sobic009G102800 Sobic003G420800 Sobic003G420800 Sobic010G252000--Sobic003G420800 Sobic010G099300 Sobic010G099300 Sobic010G252000--Sobic010G099300 Sobic008G100400 Sobic008G100400 Sobic007G182600--Sobic008G100400 Sobic007G182600--Sobic010G099300 Sobic007G182600--Sobic001G061600 Sobic001G081300 Sobic001G081300 Sobic007G182600--Sobic001G081300 Sobic001G040600 Sobic001G040600 Sobic007G182600--Sobic001G040600 Sobic008G147400 Sobic008G147400 Sobic007G182600--Sobic008G147400 Sobic003G051500 Sobic003G051500 Sobic007G182600--Sobic003G051500 Sobic007G182600--Sobic010G252000 Sobic002G380100 Sobic002G380100 Sobic007G182600--Sobic002G380100 Sobic001G164200--Sobic008G013900 Sobic001G164200--Sobic001G182300 Sobic008G049000 Sobic008G049000 Sobic001G164200--Sobic008G049000 Sobic002G094500 Sobic002G094500 Sobic001G164200--Sobic002G094500 Sobic007G129401 Sobic007G129401 Sobic001G164200--Sobic007G129401 Sobic001G164200--Sobic003G219000 Sobic009G026400 Sobic009G026400 Sobic001G164200--Sobic009G026400 Sobic002G060500 Sobic002G060500 Sobic001G164200--Sobic002G060500 Sobic005G043400 Sobic005G043400 Sobic001G164200--Sobic005G043400 Sobic008G013900--Sobic001G164200 Sobic008G013900--Sobic001G182300 Sobic008G124100 Sobic008G124100 Sobic008G013900--Sobic008G124100 Sobic008G013900--Sobic003G219000 Sobic008G013900--Sobic007G129401 Sobic008G013900--Sobic008G049000 Sobic008G013900--Sobic002G094500 Sobic003G176100 Sobic003G176100 Sobic008G013900--Sobic003G176100 Sobic010G143400 Sobic010G143400 Sobic008G013900--Sobic010G143400 Sobic001G182300--Sobic008G013900 Sobic001G182300--Sobic003G219000 Sobic001G182300--Sobic001G164200 Sobic001G182300--Sobic002G094500 Sobic001G182300--Sobic008G049000 Sobic001G182300--Sobic008G124100 Sobic001G182300--Sobic007G129401 Sobic007G066050 Sobic007G066050 Sobic001G182300--Sobic007G066050 Sobic001G182300--Sobic009G026400 Sobic003G219000--Sobic008G049000 Sobic003G219000--Sobic001G182300 Sobic003G219000--Sobic008G013900 Sobic003G219000--Sobic001G164200 Sobic003G219000--Sobic002G094500 Sobic003G219000--Sobic002G060500 Sobic003G219000--Sobic007G066050 Sobic003G219000--Sobic007G129401 Sobic006G132200 Sobic006G132200 Sobic003G219000--Sobic006G132200 Sobic004G151900 Sobic004G151900 Sobic001G061600--Sobic004G151900 Sobic003G042100 Sobic003G042100 Sobic001G061600--Sobic003G042100 Sobic006G062400 Sobic006G062400 Sobic001G061600--Sobic006G062400 Sobic007G154800 Sobic007G154800 Sobic001G061600--Sobic007G154800 Sobic001G061600--Sobic007G182600 Sobic008G021700 Sobic008G021700 Sobic001G061600--Sobic008G021700 Sobic001G061600--Sobic001G164200 Sobic003G029300 Sobic003G029300 Sobic001G061600--Sobic003G029300 Sobic002G232500 Sobic002G232500 Sobic001G061600--Sobic002G232500 Sobic009G102800--Sobic003G029300 Sobic009G102800--Sobic007G154800 Sobic003G176200 Sobic003G176200 Sobic009G102800--Sobic003G176200 Sobic007G123200 Sobic007G123200 Sobic009G102800--Sobic007G123200 Sobic009G064766 Sobic009G064766 Sobic009G102800--Sobic009G064766 Sobic009G102800--Sobic003G420800 Sobic009G102800--Sobic004G151900 Sobic001G339400 Sobic001G339400 Sobic009G102800--Sobic001G339400 Sobic009G102800--Sobic008G124100 Sobic007G210900 Sobic007G210900 Sobic003G420800--Sobic007G210900 Sobic002G315000 Sobic002G315000 Sobic003G420800--Sobic002G315000 Sobic005G204100 Sobic005G204100 Sobic003G420800--Sobic005G204100 Sobic009G154100 Sobic009G154100 Sobic003G420800--Sobic009G154100 Sobic002G179700 Sobic002G179700 Sobic003G420800--Sobic002G179700 Sobic003G333000 Sobic003G333000 Sobic003G420800--Sobic003G333000 Sobic003G174900 Sobic003G174900 Sobic003G420800--Sobic003G174900 Sobic001G482300 Sobic001G482300 Sobic003G420800--Sobic001G482300 Sobic001G047200 Sobic001G047200 Sobic003G420800--Sobic001G047200 Sobic010G099300--Sobic001G040600 Sobic010G099300--Sobic007G182600 Sobic007G060600 Sobic007G060600 Sobic010G099300--Sobic007G060600 Sobic010G099300--Sobic001G081300 Sobic001G437801 Sobic001G437801 Sobic010G099300--Sobic001G437801 Sobic001G049800 Sobic001G049800 Sobic010G099300--Sobic001G049800 Sobic010G099300--Sobic003G051500 Sobic001G395300 Sobic001G395300 Sobic010G099300--Sobic001G395300 Sobic006G271900 Sobic006G271900 Sobic010G099300--Sobic006G271900
Octagon: transcription factors


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