Gene annotation
Transcriptome id Sobic.001G087400.1
Synonym Sb01g007870
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
anther-specific proline-rich protein APG precursor, putative, expressed
UniProt C5X0A2
Pfam PF00403
Panther DB PTHR22814
NCBI CDD KOG1603; Copper chaperone
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G16380 : Heavy metal transport/detoxification superfamily protein
RAP-DB (Rice) LOC_Os03g54050.1 : anther-specific proline-rich protein APG precursor, putative, expressed
MaizeGDB (Corn) Zm00025a016791 , Zm00025a008182
Brachypodium KQK13174
Barley HORVU5Hr1G095480.4 , HORVU5Hr1G095480.1 , HORVU5Hr1G095480.3 , HORVU5Hr1G095480.2
Wheat TraesCS5D02G400900 , TraesCS5A02G391200 , TraesCS5B02G396100 , TraesCS5A02G391200
Populus -


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cDNA sequences
Sobic.001G087400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G347400 expressed protein -
2 Sobic.010G212000 haemolysin-III, putative, expressed K07297: adiponectin receptor
3 Sobic.002G381750 - K03094: SKP1, S-phase kinase-associated protein 1
4 Sobic.009G051301 - -
5 Sobic.009G199300 "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
6 Sobic.010G078200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.004G085800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ICE-like protease p20 domain containing protein, putative, expressed -
8 Sobic.003G437300 sulfotransferase domain containing protein, expressed -
9 Sobic.002G211501 - -
10 Sobic.004G068000 expressed protein -
11 Sobic.009G227201 - -
12 Sobic.002G193000 EARLY flowering protein, putative, expressed -
13 Sobic.008G011400 ASH-like SPRY domain containing protein, putative, expressed K14964: Set1/Ash2 histone methyltransferase complex subunit ASH2
14 Sobic.002G291132 - -
15 Sobic.004G250900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
16 Sobic.004G116200 expressed protein -
17 Sobic.001G421200 protein phosphatase 2C, putative, expressed -
18 Sobic.003G027700 xylosyltransferase, putative, expressed -
19 Sobic.001G234000 expressed protein -
20 Sobic.009G086800 no apical meristem protein, putative, expressed -


Gene co-expression network
sample Sobic001G087400 Sobic001G087400 Sobic001G347400 Sobic001G347400 Sobic001G087400--Sobic001G347400 Sobic010G212000 Sobic010G212000 Sobic001G087400--Sobic010G212000 Sobic002G381750 Sobic002G381750 Sobic001G087400--Sobic002G381750 Sobic009G051301 Sobic009G051301 Sobic001G087400--Sobic009G051301 Sobic009G199300 Sobic009G199300 Sobic001G087400--Sobic009G199300 Sobic010G078200 Sobic010G078200 Sobic001G087400--Sobic010G078200 Sobic004G085800 Sobic004G085800 Sobic001G087400--Sobic004G085800 Sobic003G437300 Sobic003G437300 Sobic001G087400--Sobic003G437300 Sobic002G211501 Sobic002G211501 Sobic001G087400--Sobic002G211501 Sobic002G417700 Sobic002G417700 Sobic001G347400--Sobic002G417700 Sobic010G009250 Sobic010G009250 Sobic001G347400--Sobic010G009250 Sobic001G395000 Sobic001G395000 Sobic001G347400--Sobic001G395000 Sobic006G094000 Sobic006G094000 Sobic001G347400--Sobic006G094000 Sobic004G187200 Sobic004G187200 Sobic001G347400--Sobic004G187200 Sobic009G029900 Sobic009G029900 Sobic001G347400--Sobic009G029900 Sobic001G130100 Sobic001G130100 Sobic001G347400--Sobic001G130100 Sobic007G060550 Sobic007G060550 Sobic001G347400--Sobic007G060550 Sobic007G064400 Sobic007G064400 Sobic001G347400--Sobic007G064400 Sobic003G062200 Sobic003G062200 Sobic010G212000--Sobic003G062200 Sobic004G067900 Sobic004G067900 Sobic010G212000--Sobic004G067900 Sobic006G244500 Sobic006G244500 Sobic010G212000--Sobic006G244500 Sobic009G009800 Sobic009G009800 Sobic010G212000--Sobic009G009800 Sobic003G376000 Sobic003G376000 Sobic010G212000--Sobic003G376000 Sobic010G037200 Sobic010G037200 Sobic010G212000--Sobic010G037200 Sobic006G028000 Sobic006G028000 Sobic010G212000--Sobic006G028000 Sobic010G212000--Sobic010G078200 Sobic010G212000--Sobic009G199300 Sobic008G011400 Sobic008G011400 Sobic002G381750--Sobic008G011400 Sobic003G027700 Sobic003G027700 Sobic002G381750--Sobic003G027700 Sobic001G259300 Sobic001G259300 Sobic002G381750--Sobic001G259300 Sobic003G323000 Sobic003G323000 Sobic002G381750--Sobic003G323000 Sobic001G530400 Sobic001G530400 Sobic002G381750--Sobic001G530400 Sobic003G342000 Sobic003G342000 Sobic002G381750--Sobic003G342000 Sobic009G061800 Sobic009G061800 Sobic002G381750--Sobic009G061800 Sobic002G291132 Sobic002G291132 Sobic002G381750--Sobic002G291132 Sobic008G013100 Sobic008G013100 Sobic002G381750--Sobic008G013100 Sobic005G074900 Sobic005G074900 Sobic009G051301--Sobic005G074900 Sobic006G036201 Sobic006G036201 Sobic009G051301--Sobic006G036201 Sobic004G196200 Sobic004G196200 Sobic009G051301--Sobic004G196200 Sobic005G148600 Sobic005G148600 Sobic009G051301--Sobic005G148600 Sobic005G090500 Sobic005G090500 Sobic009G051301--Sobic005G090500 Sobic005G074800 Sobic005G074800 Sobic009G051301--Sobic005G074800 Sobic006G271400 Sobic006G271400 Sobic009G051301--Sobic006G271400 Sobic007G082900 Sobic007G082900 Sobic009G051301--Sobic007G082900 Sobic009G086800 Sobic009G086800 Sobic009G051301--Sobic009G086800 Sobic007G194100 Sobic007G194100 Sobic009G199300--Sobic007G194100 Sobic010G209300 Sobic010G209300 Sobic009G199300--Sobic010G209300 Sobic007G122932 Sobic007G122932 Sobic009G199300--Sobic007G122932 Sobic007G123000 Sobic007G123000 Sobic009G199300--Sobic007G123000 Sobic007G147300 Sobic007G147300 Sobic009G199300--Sobic007G147300 Sobic009G021300 Sobic009G021300 Sobic009G199300--Sobic009G021300 Sobic002G408700 Sobic002G408700 Sobic009G199300--Sobic002G408700 Sobic005G075000 Sobic005G075000 Sobic009G199300--Sobic005G075000 Sobic005G001500 Sobic005G001500 Sobic009G199300--Sobic005G001500 Sobic007G070700 Sobic007G070700 Sobic010G078200--Sobic007G070700 Sobic007G083300 Sobic007G083300 Sobic010G078200--Sobic007G083300 Sobic007G049400 Sobic007G049400 Sobic010G078200--Sobic007G049400 Sobic001G277800 Sobic001G277800 Sobic010G078200--Sobic001G277800 Sobic005G140400 Sobic005G140400 Sobic010G078200--Sobic005G140400 Sobic003G247700 Sobic003G247700 Sobic010G078200--Sobic003G247700 Sobic002G077500 Sobic002G077500 Sobic010G078200--Sobic002G077500 Sobic001G253501 Sobic001G253501 Sobic010G078200--Sobic001G253501 Sobic009G245750 Sobic009G245750 Sobic010G078200--Sobic009G245750 Sobic002G139900 Sobic002G139900 Sobic004G085800--Sobic002G139900 Sobic010G010600 Sobic010G010600 Sobic004G085800--Sobic010G010600 Sobic001G297300 Sobic001G297300 Sobic004G085800--Sobic001G297300 Sobic007G209700 Sobic007G209700 Sobic004G085800--Sobic007G209700 Sobic001G401975 Sobic001G401975 Sobic004G085800--Sobic001G401975 Sobic004G085800--Sobic007G123000 Sobic001G059800 Sobic001G059800 Sobic004G085800--Sobic001G059800 Sobic004G256400 Sobic004G256400 Sobic004G085800--Sobic004G256400 Sobic002G088000 Sobic002G088000 Sobic004G085800--Sobic002G088000 Sobic003G437300--Sobic006G244500 Sobic003G437300--Sobic003G062200 Sobic003G437300--Sobic009G009800 Sobic003G437300--Sobic006G028000 Sobic008G037000 Sobic008G037000 Sobic003G437300--Sobic008G037000 Sobic003G437300--Sobic001G277800 Sobic006G082200 Sobic006G082200 Sobic003G437300--Sobic006G082200 Sobic003G437300--Sobic007G194100 Sobic009G082100 Sobic009G082100 Sobic003G437300--Sobic009G082100 Sobic002G211501--Sobic002G291132 Sobic010G216800 Sobic010G216800 Sobic002G211501--Sobic010G216800 Sobic010G274300 Sobic010G274300 Sobic002G211501--Sobic010G274300 Sobic002G211501--Sobic009G086800 Sobic001G234000 Sobic001G234000 Sobic002G211501--Sobic001G234000 Sobic002G211501--Sobic009G061800 Sobic002G211501--Sobic001G259300 Sobic002G211501--Sobic001G530400 Sobic002G211501--Sobic006G036201
Octagon: transcription factors


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