Gene annotation
Transcriptome id Sobic.001G139700.1
Synonym Sb01g012160
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt C5WPP9
Pfam -
Panther DB PTHR33696 PTHR33696:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os12g43750.1 : expressed protein
MaizeGDB (Corn) Zm00025a007486
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G058700 expressed protein -
2 Sobic.003G128100 expressed protein -
3 Sobic.003G436400 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
4 Sobic.008G010400 peroxidase precursor, putative, expressed K00430: peroxidase
5 Sobic.005G033100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@acyl-CoA synthetase protein, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
6 Sobic.002G260100 - -
7 Sobic.003G208000 transmembrane amino acid transporter protein, putative, expressed K15015: SLC32A, solute carrier family 32 (vesicular inhibitory amino acid transporter)
8 Sobic.009G087900 transmembrane amino acid transporter protein, putative, expressed -
9 Sobic.006G059400 - -
10 Sobic.001G359100 cytochrome P450, putative, expressed -
11 Sobic.003G070200 THION18 - Plant thionin family protein precursor, expressed -
12 Sobic.001G153800 Os10bglu34 - beta-glucosidase homologue, similar to Os3bglu6, expressed K01188: beta-glucosidase
13 Sobic.002G334400 CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
14 Sobic.003G062900 OsSCP1 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
15 Sobic.002G305400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 2, putative, expressed -
16 Sobic.004G125400 isochorismatase family protein, putative, expressed -
17 Sobic.005G006701 - -
18 Sobic.003G220000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC-2 type transporter domain containing protein, expressed -
19 Sobic.004G089400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC transporter, ATP-binding protein, putative, expressed -
20 Sobic.005G011100 GDSL-like lipase/acylhydrolase, putative, expressed -


Gene co-expression network
sample Sobic001G139700 Sobic001G139700 Sobic005G058700 Sobic005G058700 Sobic001G139700--Sobic005G058700 Sobic003G128100 Sobic003G128100 Sobic001G139700--Sobic003G128100 Sobic003G436400 Sobic003G436400 Sobic001G139700--Sobic003G436400 Sobic008G010400 Sobic008G010400 Sobic001G139700--Sobic008G010400 Sobic005G033100 Sobic005G033100 Sobic001G139700--Sobic005G033100 Sobic002G260100 Sobic002G260100 Sobic001G139700--Sobic002G260100 Sobic003G208000 Sobic003G208000 Sobic001G139700--Sobic003G208000 Sobic009G087900 Sobic009G087900 Sobic001G139700--Sobic009G087900 Sobic006G059400 Sobic006G059400 Sobic001G139700--Sobic006G059400 Sobic005G058700--Sobic008G010400 Sobic005G011100 Sobic005G011100 Sobic005G058700--Sobic005G011100 Sobic005G058700--Sobic003G436400 Sobic005G110538 Sobic005G110538 Sobic005G058700--Sobic005G110538 Sobic001G422300 Sobic001G422300 Sobic005G058700--Sobic001G422300 Sobic005G058700--Sobic003G128100 Sobic010G152900 Sobic010G152900 Sobic005G058700--Sobic010G152900 Sobic005G058700--Sobic009G087900 Sobic001G238600 Sobic001G238600 Sobic005G058700--Sobic001G238600 Sobic006G251301 Sobic006G251301 Sobic003G128100--Sobic006G251301 Sobic003G206100 Sobic003G206100 Sobic003G128100--Sobic003G206100 Sobic003G128100--Sobic009G087900 Sobic008G189800 Sobic008G189800 Sobic003G128100--Sobic008G189800 Sobic003G162500 Sobic003G162500 Sobic003G128100--Sobic003G162500 Sobic002G305400 Sobic002G305400 Sobic003G128100--Sobic002G305400 Sobic003G128100--Sobic003G436400 Sobic004G090700 Sobic004G090700 Sobic003G128100--Sobic004G090700 Sobic003G206200 Sobic003G206200 Sobic003G128100--Sobic003G206200 Sobic003G436400--Sobic009G087900 Sobic003G436400--Sobic002G305400 Sobic003G436400--Sobic003G128100 Sobic002G334400 Sobic002G334400 Sobic003G436400--Sobic002G334400 Sobic001G153800 Sobic001G153800 Sobic003G436400--Sobic001G153800 Sobic003G436400--Sobic002G260100 Sobic003G070200 Sobic003G070200 Sobic003G436400--Sobic003G070200 Sobic001G359100 Sobic001G359100 Sobic003G436400--Sobic001G359100 Sobic003G436400--Sobic006G059400 Sobic008G010400--Sobic001G422300 Sobic004G125400 Sobic004G125400 Sobic008G010400--Sobic004G125400 Sobic008G010400--Sobic005G011100 Sobic008G010400--Sobic001G238600 Sobic008G010400--Sobic010G152900 Sobic006G066500 Sobic006G066500 Sobic008G010400--Sobic006G066500 Sobic007G175400 Sobic007G175400 Sobic008G010400--Sobic007G175400 Sobic002G332300 Sobic002G332300 Sobic008G010400--Sobic002G332300 Sobic010G232000 Sobic010G232000 Sobic008G010400--Sobic010G232000 Sobic010G216400 Sobic010G216400 Sobic005G033100--Sobic010G216400 Sobic002G220100 Sobic002G220100 Sobic005G033100--Sobic002G220100 Sobic001G365700 Sobic001G365700 Sobic005G033100--Sobic001G365700 Sobic002G034700 Sobic002G034700 Sobic005G033100--Sobic002G034700 Sobic009G176500 Sobic009G176500 Sobic005G033100--Sobic009G176500 Sobic004G127000 Sobic004G127000 Sobic005G033100--Sobic004G127000 Sobic001G282900 Sobic001G282900 Sobic005G033100--Sobic001G282900 Sobic005G033100--Sobic001G139700 Sobic003G016300 Sobic003G016300 Sobic005G033100--Sobic003G016300 Sobic002G260100--Sobic006G059400 Sobic002G260100--Sobic001G359100 Sobic002G260100--Sobic003G070200 Sobic002G260100--Sobic001G153800 Sobic003G062900 Sobic003G062900 Sobic002G260100--Sobic003G062900 Sobic002G260100--Sobic002G334400 Sobic002G260100--Sobic009G087900 Sobic002G260100--Sobic002G305400 Sobic004G089400 Sobic004G089400 Sobic002G260100--Sobic004G089400 Sobic010G150900 Sobic010G150900 Sobic003G208000--Sobic010G150900 Sobic004G315000 Sobic004G315000 Sobic003G208000--Sobic004G315000 Sobic003G208000--Sobic010G216400 Sobic003G208000--Sobic001G139700 Sobic007G012300 Sobic007G012300 Sobic003G208000--Sobic007G012300 Sobic010G243300 Sobic010G243300 Sobic003G208000--Sobic010G243300 Sobic003G208000--Sobic002G220100 Sobic003G208000--Sobic005G033100 Sobic001G505700 Sobic001G505700 Sobic003G208000--Sobic001G505700 Sobic009G087900--Sobic002G305400 Sobic009G087900--Sobic002G334400 Sobic009G087900--Sobic001G153800 Sobic009G087900--Sobic001G359100 Sobic009G087900--Sobic003G070200 Sobic009G087900--Sobic006G059400 Sobic010G005900 Sobic010G005900 Sobic009G087900--Sobic010G005900 Sobic009G087900--Sobic003G206100 Sobic009G087900--Sobic002G260100 Sobic006G059400--Sobic001G359100 Sobic006G059400--Sobic003G070200 Sobic006G059400--Sobic001G153800 Sobic006G059400--Sobic002G334400 Sobic006G059400--Sobic002G260100 Sobic006G059400--Sobic003G062900 Sobic006G059400--Sobic009G087900 Sobic006G059400--Sobic002G305400 Sobic006G059400--Sobic010G005900
Octagon: transcription factors


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