Gene annotation
Transcriptome id Sobic.003G208000.1
Synonym Sb03g026920
Functional annotation transmembrane amino acid transporter protein, putative, expressed
UniProt C5XQ69
Pfam PF01490
Panther DB PTHR22950 PTHR22950:SF297
NCBI CDD KOG1303; Amino acid transporters
KEGG Orthology K15015; SLC32A, solute carrier family 32 (vesicular inhibitory amino acid transporter)
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G15240 : Transmembrane amino acid transporter family protein
RAP-DB (Rice) LOC_Os01g41400.1 : transmembrane amino acid transporter protein, putative, expressed
MaizeGDB (Corn) Zm00025a028612 , Zm00025a028613
Brachypodium KQJ82975 , KQK08574
Barley HORVU2Hr1G080420.1 , HORVU2Hr1G080390.1 , HORVU2Hr1G080390.2 , HORVU2Hr1G080390.3 , HORVU2Hr1G080390.4 , HORVU2Hr1G080430.9 , HORVU2Hr1G080430.8 , HORVU2Hr1G080430.3 , HORVU2Hr1G080430.2 , HORVU2Hr1G080430.7 , HORVU2Hr1G080430.11 , HORVU2Hr1G080430.10 , HORVU2Hr1G080430.12 , HORVU2Hr1G080430.5 , HORVU2Hr1G080430.4 , HORVU2Hr1G080430.6
Wheat TraesCS2B02G343300 , TraesCS2B02G343200 , TraesCS2A02G338600 , TraesCS2A02G338800 , TraesCS2D02G324400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G150900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.004G315000 expressed protein -
3 Sobic.010G216400 expressed protein -
4 Sobic.001G139700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.007G012300 - -
6 Sobic.010G243300 ZOS6-08 - C2H2 zinc finger protein, expressed K14816: pre-60S factor REI1
7 Sobic.002G220100 expressed protein -
8 Sobic.005G033100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@acyl-CoA synthetase protein, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
9 Sobic.001G505700 expressed protein -
10 Sobic.001G282900 cytidylyltransferase domain containing protein, expressed K00968: choline-phosphate cytidylyltransferase
11 Sobic.009G176500 similar to Putative uncharacterized protein(PubMedID : 29862293)@harpin-induced protein 1 domain containing protein, expressed -
12 Sobic.003G436400 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
13 Sobic.009G176600 cytokinin-O-glucosyltransferase 2, putative, expressed -
14 Sobic.008G101850 - -
15 Sobic.009G069600 NADP-ME(PubMedID : 19549309)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NADP-malic enzyme(PubMedID : 26904072)@NADP-dependent malic enzyme(PubMedID : 27016024)@NADP-dependent malic enzyme, chloroplast precursor, putative, expressed K00029: E1.1.1.40, malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)
16 Sobic.009G016100 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
17 Sobic.004G051133 - -
18 Sobic.001G365700 OsRhmbd13 - Putative Rhomboid homologue, expressed -
19 Sobic.008G010400 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.005G058700 expressed protein -


Gene co-expression network
sample Sobic003G208000 Sobic003G208000 Sobic010G150900 Sobic010G150900 Sobic003G208000--Sobic010G150900 Sobic004G315000 Sobic004G315000 Sobic003G208000--Sobic004G315000 Sobic010G216400 Sobic010G216400 Sobic003G208000--Sobic010G216400 Sobic001G139700 Sobic001G139700 Sobic003G208000--Sobic001G139700 Sobic007G012300 Sobic007G012300 Sobic003G208000--Sobic007G012300 Sobic010G243300 Sobic010G243300 Sobic003G208000--Sobic010G243300 Sobic002G220100 Sobic002G220100 Sobic003G208000--Sobic002G220100 Sobic005G033100 Sobic005G033100 Sobic003G208000--Sobic005G033100 Sobic001G505700 Sobic001G505700 Sobic003G208000--Sobic001G505700 Sobic010G043300 Sobic010G043300 Sobic010G150900--Sobic010G043300 Sobic002G121100 Sobic002G121100 Sobic010G150900--Sobic002G121100 Sobic004G149200 Sobic004G149200 Sobic010G150900--Sobic004G149200 Sobic004G089400 Sobic004G089400 Sobic010G150900--Sobic004G089400 Sobic003G347400 Sobic003G347400 Sobic010G150900--Sobic003G347400 Sobic007G219300 Sobic007G219300 Sobic010G150900--Sobic007G219300 Sobic005G006701 Sobic005G006701 Sobic010G150900--Sobic005G006701 Sobic001G355300 Sobic001G355300 Sobic010G150900--Sobic001G355300 Sobic003G180700 Sobic003G180700 Sobic010G150900--Sobic003G180700 Sobic009G176500 Sobic009G176500 Sobic004G315000--Sobic009G176500 Sobic001G282900 Sobic001G282900 Sobic004G315000--Sobic001G282900 Sobic002G379200 Sobic002G379200 Sobic004G315000--Sobic002G379200 Sobic004G315000--Sobic010G216400 Sobic002G227300 Sobic002G227300 Sobic004G315000--Sobic002G227300 Sobic009G186600 Sobic009G186600 Sobic004G315000--Sobic009G186600 Sobic001G533400 Sobic001G533400 Sobic004G315000--Sobic001G533400 Sobic006G224000 Sobic006G224000 Sobic004G315000--Sobic006G224000 Sobic002G183400 Sobic002G183400 Sobic004G315000--Sobic002G183400 Sobic001G365700 Sobic001G365700 Sobic010G216400--Sobic001G365700 Sobic009G069600 Sobic009G069600 Sobic010G216400--Sobic009G069600 Sobic004G232500 Sobic004G232500 Sobic010G216400--Sobic004G232500 Sobic010G031000 Sobic010G031000 Sobic010G216400--Sobic010G031000 Sobic003G273000 Sobic003G273000 Sobic010G216400--Sobic003G273000 Sobic009G176400 Sobic009G176400 Sobic010G216400--Sobic009G176400 Sobic003G335300 Sobic003G335300 Sobic010G216400--Sobic003G335300 Sobic004G173700 Sobic004G173700 Sobic010G216400--Sobic004G173700 Sobic001G482800 Sobic001G482800 Sobic010G216400--Sobic001G482800 Sobic005G058700 Sobic005G058700 Sobic001G139700--Sobic005G058700 Sobic003G128100 Sobic003G128100 Sobic001G139700--Sobic003G128100 Sobic003G436400 Sobic003G436400 Sobic001G139700--Sobic003G436400 Sobic008G010400 Sobic008G010400 Sobic001G139700--Sobic008G010400 Sobic001G139700--Sobic005G033100 Sobic002G260100 Sobic002G260100 Sobic001G139700--Sobic002G260100 Sobic001G139700--Sobic003G208000 Sobic009G087900 Sobic009G087900 Sobic001G139700--Sobic009G087900 Sobic006G059400 Sobic006G059400 Sobic001G139700--Sobic006G059400 Sobic007G012300--Sobic001G482800 Sobic004G088900 Sobic004G088900 Sobic007G012300--Sobic004G088900 Sobic003G315800 Sobic003G315800 Sobic007G012300--Sobic003G315800 Sobic007G012300--Sobic003G208000 Sobic009G260600 Sobic009G260600 Sobic007G012300--Sobic009G260600 Sobic007G012300--Sobic001G365700 Sobic004G038600 Sobic004G038600 Sobic007G012300--Sobic004G038600 Sobic007G012300--Sobic010G216400 Sobic001G120200 Sobic001G120200 Sobic007G012300--Sobic001G120200 Sobic001G422300 Sobic001G422300 Sobic010G243300--Sobic001G422300 Sobic010G243300--Sobic008G010400 Sobic004G125400 Sobic004G125400 Sobic010G243300--Sobic004G125400 Sobic006G066500 Sobic006G066500 Sobic010G243300--Sobic006G066500 Sobic004G051133 Sobic004G051133 Sobic010G243300--Sobic004G051133 Sobic005G011100 Sobic005G011100 Sobic010G243300--Sobic005G011100 Sobic010G232000 Sobic010G232000 Sobic010G243300--Sobic010G232000 Sobic010G152900 Sobic010G152900 Sobic010G243300--Sobic010G152900 Sobic007G138800 Sobic007G138800 Sobic010G243300--Sobic007G138800 Sobic002G220100--Sobic001G282900 Sobic002G220100--Sobic009G176500 Sobic002G220100--Sobic004G315000 Sobic002G220100--Sobic005G033100 Sobic002G220100--Sobic010G216400 Sobic002G329900 Sobic002G329900 Sobic002G220100--Sobic002G329900 Sobic002G173200 Sobic002G173200 Sobic002G220100--Sobic002G173200 Sobic001G047800 Sobic001G047800 Sobic002G220100--Sobic001G047800 Sobic003G296800 Sobic003G296800 Sobic002G220100--Sobic003G296800 Sobic005G033100--Sobic010G216400 Sobic005G033100--Sobic002G220100 Sobic005G033100--Sobic001G365700 Sobic002G034700 Sobic002G034700 Sobic005G033100--Sobic002G034700 Sobic005G033100--Sobic009G176500 Sobic004G127000 Sobic004G127000 Sobic005G033100--Sobic004G127000 Sobic005G033100--Sobic001G282900 Sobic005G033100--Sobic001G139700 Sobic003G016300 Sobic003G016300 Sobic005G033100--Sobic003G016300 Sobic004G247700 Sobic004G247700 Sobic001G505700--Sobic004G247700 Sobic004G247500 Sobic004G247500 Sobic001G505700--Sobic004G247500 Sobic001G505700--Sobic001G482800 Sobic007G219500 Sobic007G219500 Sobic001G505700--Sobic007G219500 Sobic001G505700--Sobic010G216400 Sobic001G505700--Sobic004G127000 Sobic008G188400 Sobic008G188400 Sobic001G505700--Sobic008G188400 Sobic001G505700--Sobic001G365700 Sobic002G113200 Sobic002G113200 Sobic001G505700--Sobic002G113200
Octagon: transcription factors


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