Gene annotation
Transcriptome id Sobic.010G243300.2,Sobic.010G243300.1
Synonym
Functional annotation ZOS6-08 - C2H2 zinc finger protein, expressed
UniProt A0A194YM92
Pfam PF12756
Panther DB PTHR13182
NCBI CDD KOG2785; C2H2-type Zn-finger protein
KEGG Orthology K14816; pre-60S factor REI1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G31420 : Zinc finger protein 622
RAP-DB (Rice) LOC_Os06g47840.1 : ZOS6-08 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a018268
Brachypodium KQK17270
Barley HORVU7Hr1G099070.1
Wheat TraesCS7A02G432100 , TraesCS7B02G332300 , TraesCS7D02G423800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G422300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@laccase precursor protein, putative, expressed K05909: laccase
2 Sobic.008G010400 peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.004G125400 isochorismatase family protein, putative, expressed -
4 Sobic.006G066500 expressed protein -
5 Sobic.004G051133 - -
6 Sobic.005G011100 GDSL-like lipase/acylhydrolase, putative, expressed -
7 Sobic.010G232000 RIC10, putative, expressed -
8 Sobic.010G152900 beta-D-xylosidase, putative, expressed -
9 Sobic.007G138800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
10 Sobic.009G087900 transmembrane amino acid transporter protein, putative, expressed -
11 Sobic.002G267000 helix-loop-helix DNA-binding domain containing protein, expressed -
12 Sobic.003G128100 expressed protein -
13 Sobic.005G135000 chalcone synthase, putative, expressed -
14 Sobic.003G220000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC-2 type transporter domain containing protein, expressed -
15 Sobic.010G108600 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
16 Sobic.005G058700 expressed protein -
17 Sobic.006G251301 - -
18 Sobic.003G206100 THION27 - Plant thionin family protein precursor, expressed -
19 Sobic.002G332300 expressed protein -
20 Sobic.010G180000 - -


Gene co-expression network
sample Sobic010G243300 Sobic010G243300 Sobic001G422300 Sobic001G422300 Sobic010G243300--Sobic001G422300 Sobic008G010400 Sobic008G010400 Sobic010G243300--Sobic008G010400 Sobic004G125400 Sobic004G125400 Sobic010G243300--Sobic004G125400 Sobic006G066500 Sobic006G066500 Sobic010G243300--Sobic006G066500 Sobic004G051133 Sobic004G051133 Sobic010G243300--Sobic004G051133 Sobic005G011100 Sobic005G011100 Sobic010G243300--Sobic005G011100 Sobic010G232000 Sobic010G232000 Sobic010G243300--Sobic010G232000 Sobic010G152900 Sobic010G152900 Sobic010G243300--Sobic010G152900 Sobic007G138800 Sobic007G138800 Sobic010G243300--Sobic007G138800 Sobic001G422300--Sobic008G010400 Sobic001G422300--Sobic010G152900 Sobic007G175400 Sobic007G175400 Sobic001G422300--Sobic007G175400 Sobic001G422300--Sobic005G011100 Sobic001G422300--Sobic006G066500 Sobic001G422300--Sobic004G125400 Sobic001G238600 Sobic001G238600 Sobic001G422300--Sobic001G238600 Sobic009G069100 Sobic009G069100 Sobic001G422300--Sobic009G069100 Sobic004G293800 Sobic004G293800 Sobic001G422300--Sobic004G293800 Sobic008G010400--Sobic001G422300 Sobic008G010400--Sobic004G125400 Sobic008G010400--Sobic005G011100 Sobic008G010400--Sobic001G238600 Sobic008G010400--Sobic010G152900 Sobic008G010400--Sobic006G066500 Sobic008G010400--Sobic007G175400 Sobic002G332300 Sobic002G332300 Sobic008G010400--Sobic002G332300 Sobic008G010400--Sobic010G232000 Sobic004G125400--Sobic008G010400 Sobic004G125400--Sobic001G422300 Sobic004G125400--Sobic006G066500 Sobic004G125400--Sobic002G332300 Sobic004G125400--Sobic010G232000 Sobic004G125400--Sobic001G238600 Sobic004G125400--Sobic005G011100 Sobic003G112200 Sobic003G112200 Sobic004G125400--Sobic003G112200 Sobic006G226200 Sobic006G226200 Sobic004G125400--Sobic006G226200 Sobic003G236701 Sobic003G236701 Sobic006G066500--Sobic003G236701 Sobic006G066500--Sobic001G422300 Sobic006G066500--Sobic006G226200 Sobic006G066500--Sobic003G112200 Sobic006G066500--Sobic004G125400 Sobic006G066500--Sobic001G238600 Sobic003G231500 Sobic003G231500 Sobic006G066500--Sobic003G231500 Sobic003G220000 Sobic003G220000 Sobic006G066500--Sobic003G220000 Sobic006G066500--Sobic008G010400 Sobic004G051133--Sobic005G011100 Sobic004G051133--Sobic008G010400 Sobic005G058700 Sobic005G058700 Sobic004G051133--Sobic005G058700 Sobic004G051133--Sobic001G422300 Sobic004G051133--Sobic010G243300 Sobic009G087900 Sobic009G087900 Sobic004G051133--Sobic009G087900 Sobic004G051133--Sobic010G232000 Sobic004G051133--Sobic010G152900 Sobic001G153800 Sobic001G153800 Sobic004G051133--Sobic001G153800 Sobic005G011100--Sobic010G152900 Sobic005G011100--Sobic008G010400 Sobic005G011100--Sobic001G422300 Sobic005G011100--Sobic007G175400 Sobic001G332050 Sobic001G332050 Sobic005G011100--Sobic001G332050 Sobic009G239800 Sobic009G239800 Sobic010G232000--Sobic009G239800 Sobic010G232000--Sobic002G332300 Sobic010G232000--Sobic001G422300 Sobic010G232000--Sobic001G238600 Sobic008G126000 Sobic008G126000 Sobic010G232000--Sobic008G126000 Sobic010G232000--Sobic007G175400 Sobic010G108100 Sobic010G108100 Sobic010G232000--Sobic010G108100 Sobic010G232000--Sobic004G125400 Sobic010G108600 Sobic010G108600 Sobic010G232000--Sobic010G108600 Sobic003G239400 Sobic003G239400 Sobic010G152900--Sobic003G239400 Sobic003G206300 Sobic003G206300 Sobic010G152900--Sobic003G206300 Sobic010G200000 Sobic010G200000 Sobic010G152900--Sobic010G200000 Sobic009G116300 Sobic009G116300 Sobic010G152900--Sobic009G116300 Sobic010G152900--Sobic001G332050 Sobic002G267000 Sobic002G267000 Sobic007G138800--Sobic002G267000 Sobic007G138800--Sobic010G108600 Sobic010G108301 Sobic010G108301 Sobic007G138800--Sobic010G108301 Sobic005G135000 Sobic005G135000 Sobic007G138800--Sobic005G135000 Sobic007G138800--Sobic010G108100 Sobic005G135800 Sobic005G135800 Sobic007G138800--Sobic005G135800 Sobic010G124500 Sobic010G124500 Sobic007G138800--Sobic010G124500 Sobic007G095000 Sobic007G095000 Sobic007G138800--Sobic007G095000 Sobic007G195500 Sobic007G195500 Sobic007G138800--Sobic007G195500
Octagon: transcription factors


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