Gene annotation
Transcriptome id Sobic.007G012300.1
Synonym
Functional annotation -
UniProt A0A1B6PEX5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g34920.1 : apomixis-related protein Pca21, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G482800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
2 Sobic.004G088900 syntaxin-related protein, putative, expressed K08486: syntaxin 1B/2/3
3 Sobic.003G315800 - -
4 Sobic.003G208000 transmembrane amino acid transporter protein, putative, expressed K15015: SLC32A, solute carrier family 32 (vesicular inhibitory amino acid transporter)
5 Sobic.009G260600 ZOS5-12 - C2H2 zinc finger protein, expressed -
6 Sobic.001G365700 OsRhmbd13 - Putative Rhomboid homologue, expressed -
7 Sobic.004G038600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR4 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
8 Sobic.010G216400 expressed protein -
9 Sobic.001G120200 OsFBDUF16 - F-box and DUF domain containing protein, expressed -
10 Sobic.002G096700 no apical meristem protein, putative, expressed -
11 Sobic.004G232500 dnaJ homolog subfamily C member 7, putative, expressed K09527: DnaJ homolog subfamily C member 7
12 Sobic.008G188400 GNS1/SUR4 membrane family protein, putative, expressed -
13 Sobic.005G070000 OsWAK92 - OsWAK receptor-like protein kinase, expressed -
14 Sobic.004G247700 expressed protein -
15 Sobic.004G247500 "HD-zip transcription factor, ortholog of sihdz02 of foxtail millet (Setaria italica L.)"(PubMedID : 29862293)@caleosin related protein, putative, expressed K17991: peroxygenase
16 Sobic.005G185200 - -
17 Sobic.005G170200 OsFBDUF55 - F-box and DUF domain containing protein, expressed -
18 Sobic.003G335300 E2F-related protein, putative, expressed -
19 Sobic.010G150900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.006G118400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@gibberellin 20 oxidase 2, putative, expressed -


Gene co-expression network
sample Sobic007G012300 Sobic007G012300 Sobic001G482800 Sobic001G482800 Sobic007G012300--Sobic001G482800 Sobic004G088900 Sobic004G088900 Sobic007G012300--Sobic004G088900 Sobic003G315800 Sobic003G315800 Sobic007G012300--Sobic003G315800 Sobic003G208000 Sobic003G208000 Sobic007G012300--Sobic003G208000 Sobic009G260600 Sobic009G260600 Sobic007G012300--Sobic009G260600 Sobic001G365700 Sobic001G365700 Sobic007G012300--Sobic001G365700 Sobic004G038600 Sobic004G038600 Sobic007G012300--Sobic004G038600 Sobic010G216400 Sobic010G216400 Sobic007G012300--Sobic010G216400 Sobic001G120200 Sobic001G120200 Sobic007G012300--Sobic001G120200 Sobic004G247700 Sobic004G247700 Sobic001G482800--Sobic004G247700 Sobic003G335300 Sobic003G335300 Sobic001G482800--Sobic003G335300 Sobic001G482800--Sobic001G365700 Sobic004G232500 Sobic004G232500 Sobic001G482800--Sobic004G232500 Sobic008G188400 Sobic008G188400 Sobic001G482800--Sobic008G188400 Sobic003G137600 Sobic003G137600 Sobic001G482800--Sobic003G137600 Sobic006G118400 Sobic006G118400 Sobic001G482800--Sobic006G118400 Sobic004G247500 Sobic004G247500 Sobic001G482800--Sobic004G247500 Sobic003G284100 Sobic003G284100 Sobic001G482800--Sobic003G284100 Sobic008G050900 Sobic008G050900 Sobic004G088900--Sobic008G050900 Sobic005G191200 Sobic005G191200 Sobic004G088900--Sobic005G191200 Sobic006G197900 Sobic006G197900 Sobic004G088900--Sobic006G197900 Sobic001G144150 Sobic001G144150 Sobic004G088900--Sobic001G144150 Sobic008G164000 Sobic008G164000 Sobic004G088900--Sobic008G164000 Sobic003G075300 Sobic003G075300 Sobic004G088900--Sobic003G075300 Sobic010G012700 Sobic010G012700 Sobic004G088900--Sobic010G012700 Sobic003G391000 Sobic003G391000 Sobic004G088900--Sobic003G391000 Sobic005G074300 Sobic005G074300 Sobic004G088900--Sobic005G074300 Sobic002G398400 Sobic002G398400 Sobic003G315800--Sobic002G398400 Sobic001G039000 Sobic001G039000 Sobic003G315800--Sobic001G039000 Sobic003G315800--Sobic004G232500 Sobic002G237500 Sobic002G237500 Sobic003G315800--Sobic002G237500 Sobic003G315800--Sobic008G188400 Sobic001G015600 Sobic001G015600 Sobic003G315800--Sobic001G015600 Sobic008G040400 Sobic008G040400 Sobic003G315800--Sobic008G040400 Sobic003G315800--Sobic007G012300 Sobic009G118100 Sobic009G118100 Sobic003G315800--Sobic009G118100 Sobic010G150900 Sobic010G150900 Sobic003G208000--Sobic010G150900 Sobic004G315000 Sobic004G315000 Sobic003G208000--Sobic004G315000 Sobic003G208000--Sobic010G216400 Sobic001G139700 Sobic001G139700 Sobic003G208000--Sobic001G139700 Sobic003G208000--Sobic007G012300 Sobic010G243300 Sobic010G243300 Sobic003G208000--Sobic010G243300 Sobic002G220100 Sobic002G220100 Sobic003G208000--Sobic002G220100 Sobic005G033100 Sobic005G033100 Sobic003G208000--Sobic005G033100 Sobic001G505700 Sobic001G505700 Sobic003G208000--Sobic001G505700 Sobic001G485000 Sobic001G485000 Sobic009G260600--Sobic001G485000 Sobic001G364900 Sobic001G364900 Sobic009G260600--Sobic001G364900 Sobic010G232300 Sobic010G232300 Sobic009G260600--Sobic010G232300 Sobic002G013550 Sobic002G013550 Sobic009G260600--Sobic002G013550 Sobic001G015000 Sobic001G015000 Sobic009G260600--Sobic001G015000 Sobic001G242200 Sobic001G242200 Sobic009G260600--Sobic001G242200 Sobic004G022366 Sobic004G022366 Sobic009G260600--Sobic004G022366 Sobic006G124500 Sobic006G124500 Sobic009G260600--Sobic006G124500 Sobic009G240500 Sobic009G240500 Sobic009G260600--Sobic009G240500 Sobic001G365700--Sobic003G335300 Sobic004G173700 Sobic004G173700 Sobic001G365700--Sobic004G173700 Sobic004G127000 Sobic004G127000 Sobic001G365700--Sobic004G127000 Sobic001G365700--Sobic003G137600 Sobic001G365700--Sobic001G482800 Sobic001G365700--Sobic010G216400 Sobic001G365700--Sobic003G284100 Sobic001G365700--Sobic004G232500 Sobic010G043250 Sobic010G043250 Sobic001G365700--Sobic010G043250 Sobic005G170200 Sobic005G170200 Sobic004G038600--Sobic005G170200 Sobic004G038600--Sobic005G074300 Sobic004G038600--Sobic008G050900 Sobic003G139200 Sobic003G139200 Sobic004G038600--Sobic003G139200 Sobic004G038600--Sobic004G247500 Sobic004G154100 Sobic004G154100 Sobic004G038600--Sobic004G154100 Sobic004G038600--Sobic004G088900 Sobic003G013700 Sobic003G013700 Sobic004G038600--Sobic003G013700 Sobic004G038600--Sobic001G365700 Sobic010G216400--Sobic001G365700 Sobic009G069600 Sobic009G069600 Sobic010G216400--Sobic009G069600 Sobic010G216400--Sobic004G232500 Sobic010G031000 Sobic010G031000 Sobic010G216400--Sobic010G031000 Sobic003G273000 Sobic003G273000 Sobic010G216400--Sobic003G273000 Sobic009G176400 Sobic009G176400 Sobic010G216400--Sobic009G176400 Sobic010G216400--Sobic003G335300 Sobic010G216400--Sobic004G173700 Sobic010G216400--Sobic001G482800 Sobic001G120200--Sobic003G284100 Sobic001G120200--Sobic003G335300 Sobic001G120200--Sobic001G482800 Sobic002G248700 Sobic002G248700 Sobic001G120200--Sobic002G248700 Sobic001G120200--Sobic001G365700 Sobic004G279200 Sobic004G279200 Sobic001G120200--Sobic004G279200 Sobic006G128200 Sobic006G128200 Sobic001G120200--Sobic006G128200 Sobic010G263400 Sobic010G263400 Sobic001G120200--Sobic010G263400 Sobic005G185200 Sobic005G185200 Sobic001G120200--Sobic005G185200
Octagon: transcription factors


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