Gene annotation
Transcriptome id Sobic.001G120200.1
Synonym Sb01g010620
Functional annotation OsFBDUF16 - F-box and DUF domain containing protein, expressed
UniProt C5WNQ8
Pfam -
Panther DB PTHR11102 PTHR11102:SF78
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G64840 : Protein of unknown function (DUF295)
RAP-DB (Rice) LOC_Os03g50050.1 : OsFBDUF16 - F-box and DUF domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQK13584
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G284100 expressed protein -
2 Sobic.003G335300 E2F-related protein, putative, expressed -
3 Sobic.001G482800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
4 Sobic.002G248700 expressed protein -
5 Sobic.001G365700 OsRhmbd13 - Putative Rhomboid homologue, expressed -
6 Sobic.004G279200 protein phosphatase 2C, putative, expressed K01102: pyruvate dehydrogenase phosphatase
7 Sobic.006G128200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Kinase(PubMedID : 30367619)@protein kinase, putative, expressed -
8 Sobic.010G263400 expressed protein -
9 Sobic.005G185200 - -
10 Sobic.004G088900 syntaxin-related protein, putative, expressed K08486: syntaxin 1B/2/3
11 Sobic.003G137600 CHIT10 - Chitinase family protein precursor, expressed -
12 Sobic.003G005100 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
13 Sobic.009G063200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein of unknown function domain containing protein, expressed -
14 Sobic.005G170200 OsFBDUF55 - F-box and DUF domain containing protein, expressed -
15 Sobic.006G070564 - K01193: INV, beta-fructofuranosidase
16 Sobic.002G113200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.006G118400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@gibberellin 20 oxidase 2, putative, expressed -
18 Sobic.010G161000 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.26 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
19 Sobic.003G212000 OsCML12 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
20 Sobic.006G252400 S4 domain containing protein, putative, expressed K14560: U3 small nucleolar ribonucleoprotein protein IMP3


Gene co-expression network
sample Sobic001G120200 Sobic001G120200 Sobic003G284100 Sobic003G284100 Sobic001G120200--Sobic003G284100 Sobic003G335300 Sobic003G335300 Sobic001G120200--Sobic003G335300 Sobic001G482800 Sobic001G482800 Sobic001G120200--Sobic001G482800 Sobic002G248700 Sobic002G248700 Sobic001G120200--Sobic002G248700 Sobic001G365700 Sobic001G365700 Sobic001G120200--Sobic001G365700 Sobic004G279200 Sobic004G279200 Sobic001G120200--Sobic004G279200 Sobic006G128200 Sobic006G128200 Sobic001G120200--Sobic006G128200 Sobic010G263400 Sobic010G263400 Sobic001G120200--Sobic010G263400 Sobic005G185200 Sobic005G185200 Sobic001G120200--Sobic005G185200 Sobic003G212000 Sobic003G212000 Sobic003G284100--Sobic003G212000 Sobic002G113200 Sobic002G113200 Sobic003G284100--Sobic002G113200 Sobic003G013700 Sobic003G013700 Sobic003G284100--Sobic003G013700 Sobic003G089100 Sobic003G089100 Sobic003G284100--Sobic003G089100 Sobic006G070564 Sobic006G070564 Sobic003G284100--Sobic006G070564 Sobic003G284100--Sobic004G279200 Sobic004G247500 Sobic004G247500 Sobic003G284100--Sobic004G247500 Sobic009G157800 Sobic009G157800 Sobic003G284100--Sobic009G157800 Sobic003G137600 Sobic003G137600 Sobic003G284100--Sobic003G137600 Sobic003G335300--Sobic001G365700 Sobic003G335300--Sobic001G482800 Sobic004G173700 Sobic004G173700 Sobic003G335300--Sobic004G173700 Sobic004G232500 Sobic004G232500 Sobic003G335300--Sobic004G232500 Sobic003G335300--Sobic003G284100 Sobic003G335300--Sobic003G137600 Sobic006G118400 Sobic006G118400 Sobic003G335300--Sobic006G118400 Sobic004G247700 Sobic004G247700 Sobic003G335300--Sobic004G247700 Sobic002G246800 Sobic002G246800 Sobic003G335300--Sobic002G246800 Sobic001G482800--Sobic004G247700 Sobic001G482800--Sobic003G335300 Sobic001G482800--Sobic001G365700 Sobic001G482800--Sobic004G232500 Sobic008G188400 Sobic008G188400 Sobic001G482800--Sobic008G188400 Sobic001G482800--Sobic003G137600 Sobic001G482800--Sobic006G118400 Sobic001G482800--Sobic004G247500 Sobic001G482800--Sobic003G284100 Sobic002G087600 Sobic002G087600 Sobic002G248700--Sobic002G087600 Sobic010G217700 Sobic010G217700 Sobic002G248700--Sobic010G217700 Sobic009G042800 Sobic009G042800 Sobic002G248700--Sobic009G042800 Sobic003G307500 Sobic003G307500 Sobic002G248700--Sobic003G307500 Sobic006G066050 Sobic006G066050 Sobic002G248700--Sobic006G066050 Sobic008G180000 Sobic008G180000 Sobic002G248700--Sobic008G180000 Sobic009G021000 Sobic009G021000 Sobic002G248700--Sobic009G021000 Sobic008G071300 Sobic008G071300 Sobic002G248700--Sobic008G071300 Sobic009G125100 Sobic009G125100 Sobic002G248700--Sobic009G125100 Sobic001G365700--Sobic003G335300 Sobic001G365700--Sobic004G173700 Sobic004G127000 Sobic004G127000 Sobic001G365700--Sobic004G127000 Sobic001G365700--Sobic003G137600 Sobic001G365700--Sobic001G482800 Sobic010G216400 Sobic010G216400 Sobic001G365700--Sobic010G216400 Sobic001G365700--Sobic003G284100 Sobic001G365700--Sobic004G232500 Sobic010G043250 Sobic010G043250 Sobic001G365700--Sobic010G043250 Sobic001G072000 Sobic001G072000 Sobic004G279200--Sobic001G072000 Sobic004G279200--Sobic006G070564 Sobic005G050400 Sobic005G050400 Sobic004G279200--Sobic005G050400 Sobic001G322400 Sobic001G322400 Sobic004G279200--Sobic001G322400 Sobic001G414650 Sobic001G414650 Sobic004G279200--Sobic001G414650 Sobic004G062200 Sobic004G062200 Sobic004G279200--Sobic004G062200 Sobic006G267100 Sobic006G267100 Sobic004G279200--Sobic006G267100 Sobic006G171600 Sobic006G171600 Sobic004G279200--Sobic006G171600 Sobic001G112600 Sobic001G112600 Sobic004G279200--Sobic001G112600 Sobic006G128200--Sobic003G335300 Sobic006G128200--Sobic003G013700 Sobic002G420600 Sobic002G420600 Sobic006G128200--Sobic002G420600 Sobic001G073700 Sobic001G073700 Sobic006G128200--Sobic001G073700 Sobic001G192700 Sobic001G192700 Sobic006G128200--Sobic001G192700 Sobic006G050100 Sobic006G050100 Sobic006G128200--Sobic006G050100 Sobic010G253400 Sobic010G253400 Sobic006G128200--Sobic010G253400 Sobic003G040700 Sobic003G040700 Sobic006G128200--Sobic003G040700 Sobic010G028900 Sobic010G028900 Sobic006G128200--Sobic010G028900 Sobic007G060100 Sobic007G060100 Sobic010G263400--Sobic007G060100 Sobic003G258100 Sobic003G258100 Sobic010G263400--Sobic003G258100 Sobic003G072700 Sobic003G072700 Sobic010G263400--Sobic003G072700 Sobic007G144100 Sobic007G144100 Sobic010G263400--Sobic007G144100 Sobic004G168900 Sobic004G168900 Sobic010G263400--Sobic004G168900 Sobic002G299500 Sobic002G299500 Sobic010G263400--Sobic002G299500 Sobic003G217800 Sobic003G217800 Sobic010G263400--Sobic003G217800 Sobic004G038400 Sobic004G038400 Sobic010G263400--Sobic004G038400 Sobic004G250800 Sobic004G250800 Sobic010G263400--Sobic004G250800 Sobic003G044700 Sobic003G044700 Sobic005G185200--Sobic003G044700 Sobic001G135200 Sobic001G135200 Sobic005G185200--Sobic001G135200 Sobic001G188000 Sobic001G188000 Sobic005G185200--Sobic001G188000 Sobic001G203800 Sobic001G203800 Sobic005G185200--Sobic001G203800 Sobic001G528100 Sobic001G528100 Sobic005G185200--Sobic001G528100 Sobic002G037600 Sobic002G037600 Sobic005G185200--Sobic002G037600 Sobic005G185200--Sobic003G284100 Sobic004G328100 Sobic004G328100 Sobic005G185200--Sobic004G328100 Sobic005G185200--Sobic003G335300
Octagon: transcription factors


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