Gene annotation
Transcriptome id Sobic.010G161000.1
Synonym SnRK3.9, SbCIPK32, ATWL4, Sb10g021570, CBL-interacting protein kinases, WL4, CIPK12
Functional annotation Interacting factor of CBLs (PubMedID : 19860013)
CAMK_KIN1/SNF1/Nim1_like.26 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt C4P7U6
Pfam PF03822 PF00069
Panther DB PTHR24347 PTHR24347:SF234
NCBI CDD KOG0583; Serine/threonine protein kinase
KEGG Orthology K07198; PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
Gene Ontology GO:0007165; signal transduction GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G18700 : CBL-interacting protein kinase 12
RAP-DB (Rice) LOC_Os06g35160.1 : CAMK_KIN1/SNF1/Nim1_like.26 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a031165 , Zm00025a049149
Brachypodium KQK18060
Barley HORVU7Hr1G089510.1 , HORVU7Hr1G089510.2 , HORVU7Hr1G089510.3
Wheat TraesCS7A02G352200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G217100 plastocyanin-like domain containing protein, putative, expressed -
2 Sobic.003G351200 B4-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
3 Sobic.003G441000 rhoGAP domain containing protein, expressed -
4 Sobic.005G144000 glycosyltransferase, putative, expressed -
5 Sobic.001G039100 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
6 Sobic.002G382300 expressed protein -
7 Sobic.006G070564 - K01193: INV, beta-fructofuranosidase
8 Sobic.002G404600 expressed protein -
9 Sobic.004G318900 stage II sporulation protein E, putative, expressed -
10 Sobic.009G090566 - -
11 Sobic.008G071300 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
12 Sobic.004G290500 actin-depolymerizing factor, putative, expressed K05765: cofilin
13 Sobic.006G197900 expressed protein -
14 Sobic.006G069766 - -
15 Sobic.002G381500 uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed K01087: trehalose 6-phosphate phosphatase
16 Sobic.001G414650 - K08678: UXS1, UDP-glucuronate decarboxylase
17 Sobic.001G503600 expressed protein -
18 Sobic.009G110600 OsFBX422 - F-box domain containing protein, expressed -
19 Sobic.001G192300 expressed protein -
20 Sobic.001G357400 emp24/gp25L/p24 family protein, putative, expressed -


Gene co-expression network
sample Sobic010G161000 Sobic010G161000 Sobic004G217100 Sobic004G217100 Sobic010G161000--Sobic004G217100 Sobic003G351200 Sobic003G351200 Sobic010G161000--Sobic003G351200 Sobic003G441000 Sobic003G441000 Sobic010G161000--Sobic003G441000 Sobic005G144000 Sobic005G144000 Sobic010G161000--Sobic005G144000 Sobic001G039100 Sobic001G039100 Sobic010G161000--Sobic001G039100 Sobic002G382300 Sobic002G382300 Sobic010G161000--Sobic002G382300 Sobic006G070564 Sobic006G070564 Sobic010G161000--Sobic006G070564 Sobic002G404600 Sobic002G404600 Sobic010G161000--Sobic002G404600 Sobic004G318900 Sobic004G318900 Sobic010G161000--Sobic004G318900 Sobic006G224400 Sobic006G224400 Sobic004G217100--Sobic006G224400 Sobic005G087732 Sobic005G087732 Sobic004G217100--Sobic005G087732 Sobic007G167950 Sobic007G167950 Sobic004G217100--Sobic007G167950 Sobic004G086900 Sobic004G086900 Sobic004G217100--Sobic004G086900 Sobic007G110800 Sobic007G110800 Sobic004G217100--Sobic007G110800 Sobic007G082300 Sobic007G082300 Sobic004G217100--Sobic007G082300 Sobic005G058300 Sobic005G058300 Sobic004G217100--Sobic005G058300 Sobic007G081800 Sobic007G081800 Sobic004G217100--Sobic007G081800 Sobic010G123800 Sobic010G123800 Sobic004G217100--Sobic010G123800 Sobic009G090566 Sobic009G090566 Sobic003G351200--Sobic009G090566 Sobic003G351200--Sobic003G441000 Sobic010G142650 Sobic010G142650 Sobic003G351200--Sobic010G142650 Sobic010G111000 Sobic010G111000 Sobic003G351200--Sobic010G111000 Sobic006G214900 Sobic006G214900 Sobic003G351200--Sobic006G214900 Sobic004G120600 Sobic004G120600 Sobic003G351200--Sobic004G120600 Sobic006G069766 Sobic006G069766 Sobic003G351200--Sobic006G069766 Sobic002G283200 Sobic002G283200 Sobic003G351200--Sobic002G283200 Sobic005G114201 Sobic005G114201 Sobic003G351200--Sobic005G114201 Sobic003G441000--Sobic005G144000 Sobic001G112600 Sobic001G112600 Sobic003G441000--Sobic001G112600 Sobic002G170100 Sobic002G170100 Sobic003G441000--Sobic002G170100 Sobic009G242200 Sobic009G242200 Sobic003G441000--Sobic009G242200 Sobic001G279000 Sobic001G279000 Sobic003G441000--Sobic001G279000 Sobic004G358000 Sobic004G358000 Sobic003G441000--Sobic004G358000 Sobic003G290500 Sobic003G290500 Sobic003G441000--Sobic003G290500 Sobic008G055200 Sobic008G055200 Sobic003G441000--Sobic008G055200 Sobic005G170400 Sobic005G170400 Sobic003G441000--Sobic005G170400 Sobic005G144000--Sobic003G441000 Sobic005G144000--Sobic002G170100 Sobic008G122800 Sobic008G122800 Sobic005G144000--Sobic008G122800 Sobic005G144000--Sobic001G279000 Sobic005G144000--Sobic009G242200 Sobic001G503600 Sobic001G503600 Sobic005G144000--Sobic001G503600 Sobic004G180100 Sobic004G180100 Sobic005G144000--Sobic004G180100 Sobic008G071300 Sobic008G071300 Sobic005G144000--Sobic008G071300 Sobic005G144000--Sobic002G404600 Sobic001G039100--Sobic002G404600 Sobic007G196700 Sobic007G196700 Sobic001G039100--Sobic007G196700 Sobic002G381500 Sobic002G381500 Sobic001G039100--Sobic002G381500 Sobic002G308900 Sobic002G308900 Sobic001G039100--Sobic002G308900 Sobic009G110600 Sobic009G110600 Sobic001G039100--Sobic009G110600 Sobic006G105100 Sobic006G105100 Sobic001G039100--Sobic006G105100 Sobic002G380300 Sobic002G380300 Sobic001G039100--Sobic002G380300 Sobic001G414650 Sobic001G414650 Sobic001G039100--Sobic001G414650 Sobic004G290500 Sobic004G290500 Sobic001G039100--Sobic004G290500 Sobic006G170500 Sobic006G170500 Sobic002G382300--Sobic006G170500 Sobic002G382300--Sobic004G217100 Sobic009G047900 Sobic009G047900 Sobic002G382300--Sobic009G047900 Sobic010G196700 Sobic010G196700 Sobic002G382300--Sobic010G196700 Sobic008G155500 Sobic008G155500 Sobic002G382300--Sobic008G155500 Sobic002G382300--Sobic006G224400 Sobic002G382300--Sobic007G110800 Sobic007G198900 Sobic007G198900 Sobic002G382300--Sobic007G198900 Sobic002G382300--Sobic004G086900 Sobic006G070564--Sobic001G039100 Sobic004G279200 Sobic004G279200 Sobic006G070564--Sobic004G279200 Sobic006G189300 Sobic006G189300 Sobic006G070564--Sobic006G189300 Sobic006G070564--Sobic002G404600 Sobic006G070564--Sobic001G503600 Sobic006G070564--Sobic001G414650 Sobic010G038300 Sobic010G038300 Sobic006G070564--Sobic010G038300 Sobic001G357400 Sobic001G357400 Sobic006G070564--Sobic001G357400 Sobic006G070564--Sobic007G196700 Sobic007G204200 Sobic007G204200 Sobic002G404600--Sobic007G204200 Sobic002G404600--Sobic004G290500 Sobic001G089400 Sobic001G089400 Sobic002G404600--Sobic001G089400 Sobic005G037700 Sobic005G037700 Sobic002G404600--Sobic005G037700 Sobic004G192600 Sobic004G192600 Sobic002G404600--Sobic004G192600 Sobic003G004000 Sobic003G004000 Sobic002G404600--Sobic003G004000 Sobic007G197000 Sobic007G197000 Sobic002G404600--Sobic007G197000 Sobic002G404600--Sobic002G381500 Sobic002G404600--Sobic002G380300 Sobic002G340600 Sobic002G340600 Sobic004G318900--Sobic002G340600 Sobic004G318900--Sobic002G283200 Sobic009G177750 Sobic009G177750 Sobic004G318900--Sobic009G177750 Sobic007G081701 Sobic007G081701 Sobic004G318900--Sobic007G081701 Sobic003G114600 Sobic003G114600 Sobic004G318900--Sobic003G114600 Sobic007G042800 Sobic007G042800 Sobic004G318900--Sobic007G042800 Sobic007G102900 Sobic007G102900 Sobic004G318900--Sobic007G102900 Sobic004G318900--Sobic003G290500 Sobic004G318900--Sobic002G380300
Octagon: transcription factors


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