Gene annotation
Transcriptome id Sobic.002G248700.1
Synonym Sb02g028470
Functional annotation expressed protein
UniProt C5X3Y3
Pfam -
Panther DB PTHR34285 PTHR34285:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G57990 : -
RAP-DB (Rice) LOC_Os09g31458.1 : expressed protein
MaizeGDB (Corn) Zm00025a055340 , Zm00025a014218 , Zm00025a033814
Brachypodium PNT68398 , KQJ90772
Barley HORVU5Hr1G073600.2 , HORVU5Hr1G073600.1
Wheat -
Populus -


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cDNA sequences
Sobic.002G248700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G087600 OsFBX231 - F-box domain containing protein, expressed -
2 Sobic.010G217700 clathrin assembly protein, putative, expressed -
3 Sobic.009G042800 expressed protein -
4 Sobic.003G307500 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
5 Sobic.006G066050 - -
6 Sobic.008G180000 - -
7 Sobic.009G021000 exocyst complex component 6, putative, expressed -
8 Sobic.008G071300 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
9 Sobic.009G125100 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12813: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
10 Sobic.001G503600 expressed protein -
11 Sobic.006G267100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.003G212000 OsCML12 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
13 Sobic.004G059200 inactive receptor kinase At2g26730 precursor, putative, expressed -
14 Sobic.008G165401 - -
15 Sobic.001G357400 emp24/gp25L/p24 family protein, putative, expressed -
16 Sobic.002G340600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative, expressed K17871: NADH:ubiquinone reductase (non-electrogenic)
17 Sobic.004G250800 pre-mRNA-processing factor 31, putative, expressed K12844: U4/U6 small nuclear ribonucleoprotein PRP31
18 Sobic.007G138000 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
19 Sobic.004G327000 STE_PAK_Ste20_STLK.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
20 Sobic.001G414650 - K08678: UXS1, UDP-glucuronate decarboxylase


Gene co-expression network
sample Sobic002G248700 Sobic002G248700 Sobic002G087600 Sobic002G087600 Sobic002G248700--Sobic002G087600 Sobic010G217700 Sobic010G217700 Sobic002G248700--Sobic010G217700 Sobic009G042800 Sobic009G042800 Sobic002G248700--Sobic009G042800 Sobic003G307500 Sobic003G307500 Sobic002G248700--Sobic003G307500 Sobic006G066050 Sobic006G066050 Sobic002G248700--Sobic006G066050 Sobic008G180000 Sobic008G180000 Sobic002G248700--Sobic008G180000 Sobic009G021000 Sobic009G021000 Sobic002G248700--Sobic009G021000 Sobic008G071300 Sobic008G071300 Sobic002G248700--Sobic008G071300 Sobic009G125100 Sobic009G125100 Sobic002G248700--Sobic009G125100 Sobic002G087600--Sobic009G021000 Sobic002G087600--Sobic006G066050 Sobic002G087600--Sobic009G125100 Sobic007G127800 Sobic007G127800 Sobic002G087600--Sobic007G127800 Sobic002G087600--Sobic009G042800 Sobic004G059200 Sobic004G059200 Sobic002G087600--Sobic004G059200 Sobic002G015200 Sobic002G015200 Sobic002G087600--Sobic002G015200 Sobic007G161100 Sobic007G161100 Sobic002G087600--Sobic007G161100 Sobic002G406801 Sobic002G406801 Sobic002G087600--Sobic002G406801 Sobic010G217700--Sobic007G161100 Sobic001G196400 Sobic001G196400 Sobic010G217700--Sobic001G196400 Sobic010G217700--Sobic004G059200 Sobic003G208900 Sobic003G208900 Sobic010G217700--Sobic003G208900 Sobic004G327000 Sobic004G327000 Sobic010G217700--Sobic004G327000 Sobic004G348000 Sobic004G348000 Sobic010G217700--Sobic004G348000 Sobic006G232700 Sobic006G232700 Sobic010G217700--Sobic006G232700 Sobic003G317000 Sobic003G317000 Sobic010G217700--Sobic003G317000 Sobic005G039000 Sobic005G039000 Sobic010G217700--Sobic005G039000 Sobic009G042800--Sobic009G021000 Sobic009G042800--Sobic006G066050 Sobic009G042800--Sobic009G125100 Sobic009G042800--Sobic007G161100 Sobic009G042800--Sobic004G059200 Sobic009G042800--Sobic002G015200 Sobic009G042800--Sobic002G087600 Sobic003G054800 Sobic003G054800 Sobic009G042800--Sobic003G054800 Sobic009G042800--Sobic004G327000 Sobic001G522800 Sobic001G522800 Sobic003G307500--Sobic001G522800 Sobic003G307500--Sobic009G021000 Sobic003G307500--Sobic002G015200 Sobic003G307500--Sobic009G042800 Sobic003G307500--Sobic009G125100 Sobic003G307500--Sobic006G066050 Sobic003G307500--Sobic002G087600 Sobic010G082300 Sobic010G082300 Sobic003G307500--Sobic010G082300 Sobic003G307500--Sobic003G054800 Sobic006G066050--Sobic009G021000 Sobic006G066050--Sobic004G059200 Sobic006G066050--Sobic007G161100 Sobic006G066050--Sobic009G042800 Sobic006G066050--Sobic004G327000 Sobic006G066050--Sobic003G054800 Sobic006G066050--Sobic002G087600 Sobic006G018701 Sobic006G018701 Sobic006G066050--Sobic006G018701 Sobic006G066050--Sobic009G125100 Sobic008G180000--Sobic004G327000 Sobic008G180000--Sobic006G018701 Sobic003G160600 Sobic003G160600 Sobic008G180000--Sobic003G160600 Sobic010G026200 Sobic010G026200 Sobic008G180000--Sobic010G026200 Sobic004G160000 Sobic004G160000 Sobic008G180000--Sobic004G160000 Sobic009G158300 Sobic009G158300 Sobic008G180000--Sobic009G158300 Sobic008G153700 Sobic008G153700 Sobic008G180000--Sobic008G153700 Sobic001G409000 Sobic001G409000 Sobic008G180000--Sobic001G409000 Sobic008G180000--Sobic002G406801 Sobic009G021000--Sobic006G066050 Sobic009G021000--Sobic004G059200 Sobic009G021000--Sobic009G042800 Sobic009G021000--Sobic007G161100 Sobic009G021000--Sobic003G054800 Sobic009G021000--Sobic002G087600 Sobic009G021000--Sobic009G125100 Sobic009G021000--Sobic004G327000 Sobic009G021000--Sobic006G018701 Sobic006G267100 Sobic006G267100 Sobic008G071300--Sobic006G267100 Sobic002G170100 Sobic002G170100 Sobic008G071300--Sobic002G170100 Sobic003G114600 Sobic003G114600 Sobic008G071300--Sobic003G114600 Sobic002G283200 Sobic002G283200 Sobic008G071300--Sobic002G283200 Sobic003G290500 Sobic003G290500 Sobic008G071300--Sobic003G290500 Sobic001G039100 Sobic001G039100 Sobic008G071300--Sobic001G039100 Sobic002G340600 Sobic002G340600 Sobic008G071300--Sobic002G340600 Sobic006G105100 Sobic006G105100 Sobic008G071300--Sobic006G105100 Sobic001G503600 Sobic001G503600 Sobic008G071300--Sobic001G503600 Sobic009G125100--Sobic009G042800 Sobic009G125100--Sobic004G059200 Sobic009G125100--Sobic009G021000 Sobic009G125100--Sobic004G348000 Sobic009G125100--Sobic006G066050 Sobic009G125100--Sobic002G087600 Sobic009G125100--Sobic007G161100 Sobic001G272100 Sobic001G272100 Sobic009G125100--Sobic001G272100 Sobic009G125100--Sobic002G015200
Octagon: transcription factors


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