Gene annotation
Transcriptome id Sobic.004G038600.1
Synonym Sb04g003320, SbSAUR33, DELTA-VPE, small auxin up RNA, DELTAVPE
Functional annotation "domain confirmed by Pfam database, expression not supported" (PubMedID : 20499123)
OsSAUR4 - Auxin-responsive SAUR gene family member, expressed
UniProt C5XUK9
Pfam PF02519
Panther DB PTHR31374 PTHR31374:SF14
NCBI CDD -
KEGG Orthology K14488; SAUR family protein
Gene Ontology GO:0009733; response to auxin


Orthologs (automatic annotation)
TAIR AT3G20210 : delta vacuolar processing enzyme
RAP-DB (Rice) LOC_Os02g05050.1 : OsSAUR4 - Auxin-responsive SAUR gene family member, expressed
MaizeGDB (Corn) Zm00025a018371 , Zm00025a012403
Brachypodium -
Barley HORVU7Hr1G096870.1 , HORVU6Hr1G020840.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G170200 OsFBDUF55 - F-box and DUF domain containing protein, expressed -
2 Sobic.005G074300 - -
3 Sobic.008G050900 expressed protein -
4 Sobic.003G139200 - -
5 Sobic.004G247500 "HD-zip transcription factor, ortholog of sihdz02 of foxtail millet (Setaria italica L.)"(PubMedID : 29862293)@caleosin related protein, putative, expressed K17991: peroxygenase
6 Sobic.004G154100 OsFBX346 - F-box domain containing protein, expressed -
7 Sobic.004G088900 syntaxin-related protein, putative, expressed K08486: syntaxin 1B/2/3
8 Sobic.003G013700 vacuolar ATP synthase subunit E, putative, expressed K02150: ATPeV1E, V-type H+-transporting ATPase subunit E
9 Sobic.001G365700 OsRhmbd13 - Putative Rhomboid homologue, expressed -
10 Sobic.009G157800 transporter family protein, putative, expressed -
11 Sobic.007G212100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@AGC_PVPK_like_CDK8.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
12 Sobic.001G303900 CPuORF23 - conserved peptide uORF-containing transcript, expressed K01087: trehalose 6-phosphate phosphatase
13 Sobic.003G202400 expressed protein -
14 Sobic.003G137600 CHIT10 - Chitinase family protein precursor, expressed -
15 Sobic.010G052900 expressed protein -
16 Sobic.003G284100 expressed protein -
17 Sobic.004G173700 SLL1 protein, putative, expressed -
18 Sobic.001G144150 - -
19 Sobic.009G176400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
20 Sobic.003G340000 expressed protein -


Gene co-expression network
sample Sobic004G038600 Sobic004G038600 Sobic005G170200 Sobic005G170200 Sobic004G038600--Sobic005G170200 Sobic005G074300 Sobic005G074300 Sobic004G038600--Sobic005G074300 Sobic008G050900 Sobic008G050900 Sobic004G038600--Sobic008G050900 Sobic003G139200 Sobic003G139200 Sobic004G038600--Sobic003G139200 Sobic004G247500 Sobic004G247500 Sobic004G038600--Sobic004G247500 Sobic004G154100 Sobic004G154100 Sobic004G038600--Sobic004G154100 Sobic004G088900 Sobic004G088900 Sobic004G038600--Sobic004G088900 Sobic003G013700 Sobic003G013700 Sobic004G038600--Sobic003G013700 Sobic001G365700 Sobic001G365700 Sobic004G038600--Sobic001G365700 Sobic001G144150 Sobic001G144150 Sobic005G170200--Sobic001G144150 Sobic010G263700 Sobic010G263700 Sobic005G170200--Sobic010G263700 Sobic001G186700 Sobic001G186700 Sobic005G170200--Sobic001G186700 Sobic001G034200 Sobic001G034200 Sobic005G170200--Sobic001G034200 Sobic005G170200--Sobic005G074300 Sobic004G038400 Sobic004G038400 Sobic005G170200--Sobic004G038400 Sobic003G005700 Sobic003G005700 Sobic005G170200--Sobic003G005700 Sobic003G048400 Sobic003G048400 Sobic005G170200--Sobic003G048400 Sobic006G070564 Sobic006G070564 Sobic005G170200--Sobic006G070564 Sobic005G074300--Sobic008G050900 Sobic001G039100 Sobic001G039100 Sobic005G074300--Sobic001G039100 Sobic010G129450 Sobic010G129450 Sobic005G074300--Sobic010G129450 Sobic002G381500 Sobic002G381500 Sobic005G074300--Sobic002G381500 Sobic003G133201 Sobic003G133201 Sobic005G074300--Sobic003G133201 Sobic004G217100 Sobic004G217100 Sobic005G074300--Sobic004G217100 Sobic001G414650 Sobic001G414650 Sobic005G074300--Sobic001G414650 Sobic002G382300 Sobic002G382300 Sobic005G074300--Sobic002G382300 Sobic006G224400 Sobic006G224400 Sobic005G074300--Sobic006G224400 Sobic008G050900--Sobic001G039100 Sobic002G176000 Sobic002G176000 Sobic008G050900--Sobic002G176000 Sobic008G050900--Sobic005G074300 Sobic008G050900--Sobic003G133201 Sobic005G144000 Sobic005G144000 Sobic008G050900--Sobic005G144000 Sobic005G201501 Sobic005G201501 Sobic008G050900--Sobic005G201501 Sobic008G050900--Sobic006G070564 Sobic005G077001 Sobic005G077001 Sobic008G050900--Sobic005G077001 Sobic008G050900--Sobic002G381500 Sobic004G173700 Sobic004G173700 Sobic003G139200--Sobic004G173700 Sobic003G137600 Sobic003G137600 Sobic003G139200--Sobic003G137600 Sobic006G120900 Sobic006G120900 Sobic003G139200--Sobic006G120900 Sobic007G212100 Sobic007G212100 Sobic003G139200--Sobic007G212100 Sobic002G113200 Sobic002G113200 Sobic003G139200--Sobic002G113200 Sobic003G139200--Sobic004G247500 Sobic001G303900 Sobic001G303900 Sobic003G139200--Sobic001G303900 Sobic003G212000 Sobic003G212000 Sobic003G139200--Sobic003G212000 Sobic009G189700 Sobic009G189700 Sobic003G139200--Sobic009G189700 Sobic004G247500--Sobic001G303900 Sobic009G157800 Sobic009G157800 Sobic004G247500--Sobic009G157800 Sobic004G247500--Sobic009G189700 Sobic004G247500--Sobic006G070564 Sobic003G340000 Sobic003G340000 Sobic004G247500--Sobic003G340000 Sobic004G247500--Sobic008G050900 Sobic004G247500--Sobic005G144000 Sobic004G247500--Sobic005G074300 Sobic009G176600 Sobic009G176600 Sobic004G247500--Sobic009G176600 Sobic002G170100 Sobic002G170100 Sobic004G154100--Sobic002G170100 Sobic001G279000 Sobic001G279000 Sobic004G154100--Sobic001G279000 Sobic004G154100--Sobic005G144000 Sobic008G122800 Sobic008G122800 Sobic004G154100--Sobic008G122800 Sobic004G154100--Sobic002G381500 Sobic009G242200 Sobic009G242200 Sobic004G154100--Sobic009G242200 Sobic004G154100--Sobic001G039100 Sobic002G283200 Sobic002G283200 Sobic004G154100--Sobic002G283200 Sobic006G267100 Sobic006G267100 Sobic004G154100--Sobic006G267100 Sobic004G088900--Sobic008G050900 Sobic005G191200 Sobic005G191200 Sobic004G088900--Sobic005G191200 Sobic006G197900 Sobic006G197900 Sobic004G088900--Sobic006G197900 Sobic004G088900--Sobic001G144150 Sobic008G164000 Sobic008G164000 Sobic004G088900--Sobic008G164000 Sobic003G075300 Sobic003G075300 Sobic004G088900--Sobic003G075300 Sobic010G012700 Sobic010G012700 Sobic004G088900--Sobic010G012700 Sobic003G391000 Sobic003G391000 Sobic004G088900--Sobic003G391000 Sobic004G088900--Sobic005G074300 Sobic004G261800 Sobic004G261800 Sobic003G013700--Sobic004G261800 Sobic005G050400 Sobic005G050400 Sobic003G013700--Sobic005G050400 Sobic001G072000 Sobic001G072000 Sobic003G013700--Sobic001G072000 Sobic008G156600 Sobic008G156600 Sobic003G013700--Sobic008G156600 Sobic003G089100 Sobic003G089100 Sobic003G013700--Sobic003G089100 Sobic009G163100 Sobic009G163100 Sobic003G013700--Sobic009G163100 Sobic001G322400 Sobic001G322400 Sobic003G013700--Sobic001G322400 Sobic002G172401 Sobic002G172401 Sobic003G013700--Sobic002G172401 Sobic001G112600 Sobic001G112600 Sobic003G013700--Sobic001G112600 Sobic003G335300 Sobic003G335300 Sobic001G365700--Sobic003G335300 Sobic001G365700--Sobic004G173700 Sobic004G127000 Sobic004G127000 Sobic001G365700--Sobic004G127000 Sobic001G365700--Sobic003G137600 Sobic001G482800 Sobic001G482800 Sobic001G365700--Sobic001G482800 Sobic010G216400 Sobic010G216400 Sobic001G365700--Sobic010G216400 Sobic003G284100 Sobic003G284100 Sobic001G365700--Sobic003G284100 Sobic004G232500 Sobic004G232500 Sobic001G365700--Sobic004G232500 Sobic010G043250 Sobic010G043250 Sobic001G365700--Sobic010G043250
Octagon: transcription factors


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