Gene annotation
Transcriptome id Sobic.009G016100.1
Synonym Sb09g001540
Functional annotation endonuclease/exonuclease/phosphatase family domain containing protein, expressed
UniProt C5YYL6
Pfam PF03372
Panther DB PTHR11200 PTHR11200:SF115
NCBI CDD KOG0565; Inositol polyphosphate 5-phosphatase and related proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G37440 : DNAse I-like superfamily protein
RAP-DB (Rice) LOC_Os05g02350.1 : endonuclease/exonuclease/phosphatase family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a052942 , Zm00025a040897 , Zm00025a040898
Brachypodium KQK07734 , KQK07733 , PNT78147
Barley -
Wheat TraesCSU02G006000 , TraesCS1A02G039300 , TraesCS1B02G052100 , TraesCS3A02G114900 , TraesCS3D02G117300 , TraesCS3D02G117300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G110200 OsWLIM1 - LIM domain protein, putative actin-binding protein and transcription factor, expressed K09377: cysteine and glycine-rich protein
2 Sobic.004G030300 expressed protein -
3 Sobic.009G048000 villin, putative, expressed K08017: advillin
4 Sobic.004G315000 expressed protein -
5 Sobic.003G364900 hemerythrin family protein, expressed -
6 Sobic.004G221300 transporter-related, putative, expressed K15285: solute carrier family 35, member E3
7 Sobic.003G072900 OsRhmbd18 - Putative Rhomboid homologue, expressed -
8 Sobic.003G105500 transferase family protein, putative, expressed -
9 Sobic.008G141200 DUF1336 domain containing protein, expressed -
10 Sobic.003G220000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC-2 type transporter domain containing protein, expressed -
11 Sobic.006G148800 "Phenylalanine ammonia-lyase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@phenylalanine ammonia-lyase, putative, expressed K13064: phenylalanine/tyrosine ammonia-lyase
12 Sobic.001G431100 Plantacyanin(PubMedID : 23915383)@plastocyanin-like domain containing protein, putative, expressed -
13 Sobic.004G125400 isochorismatase family protein, putative, expressed -
14 Sobic.003G075700 - -
15 Sobic.007G018100 no apical meristem protein, putative, expressed -
16 Sobic.003G128900 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
17 Sobic.001G434300 expressed protein -
18 Sobic.005G132300 cytochrome P450 51, putative, expressed K05917: sterol 14alpha-demethylase
19 Sobic.006G226200 kinesin motor domain containing protein, putative, expressed K10405: kinesin family member C1
20 Sobic.001G362100 nodulation protein-related, putative, expressed -


Gene co-expression network
sample Sobic009G016100 Sobic009G016100 Sobic008G110200 Sobic008G110200 Sobic009G016100--Sobic008G110200 Sobic004G030300 Sobic004G030300 Sobic009G016100--Sobic004G030300 Sobic009G048000 Sobic009G048000 Sobic009G016100--Sobic009G048000 Sobic004G315000 Sobic004G315000 Sobic009G016100--Sobic004G315000 Sobic003G364900 Sobic003G364900 Sobic009G016100--Sobic003G364900 Sobic004G221300 Sobic004G221300 Sobic009G016100--Sobic004G221300 Sobic003G072900 Sobic003G072900 Sobic009G016100--Sobic003G072900 Sobic003G105500 Sobic003G105500 Sobic009G016100--Sobic003G105500 Sobic008G141200 Sobic008G141200 Sobic009G016100--Sobic008G141200 Sobic008G110200--Sobic004G221300 Sobic001G409100 Sobic001G409100 Sobic008G110200--Sobic001G409100 Sobic001G038300 Sobic001G038300 Sobic008G110200--Sobic001G038300 Sobic010G180100 Sobic010G180100 Sobic008G110200--Sobic010G180100 Sobic008G110200--Sobic009G048000 Sobic006G148800 Sobic006G148800 Sobic008G110200--Sobic006G148800 Sobic001G418100 Sobic001G418100 Sobic008G110200--Sobic001G418100 Sobic008G110200--Sobic008G141200 Sobic008G110200--Sobic009G016100 Sobic003G052900 Sobic003G052900 Sobic004G030300--Sobic003G052900 Sobic002G226500 Sobic002G226500 Sobic004G030300--Sobic002G226500 Sobic001G245800 Sobic001G245800 Sobic004G030300--Sobic001G245800 Sobic006G030200 Sobic006G030200 Sobic004G030300--Sobic006G030200 Sobic007G018100 Sobic007G018100 Sobic004G030300--Sobic007G018100 Sobic006G119000 Sobic006G119000 Sobic004G030300--Sobic006G119000 Sobic003G247600 Sobic003G247600 Sobic004G030300--Sobic003G247600 Sobic003G307400 Sobic003G307400 Sobic004G030300--Sobic003G307400 Sobic001G434300 Sobic001G434300 Sobic004G030300--Sobic001G434300 Sobic006G226200 Sobic006G226200 Sobic009G048000--Sobic006G226200 Sobic003G296400 Sobic003G296400 Sobic009G048000--Sobic003G296400 Sobic002G205500 Sobic002G205500 Sobic009G048000--Sobic002G205500 Sobic003G236701 Sobic003G236701 Sobic009G048000--Sobic003G236701 Sobic001G468300 Sobic001G468300 Sobic009G048000--Sobic001G468300 Sobic009G226900 Sobic009G226900 Sobic009G048000--Sobic009G226900 Sobic001G224300 Sobic001G224300 Sobic009G048000--Sobic001G224300 Sobic003G112200 Sobic003G112200 Sobic009G048000--Sobic003G112200 Sobic007G223600 Sobic007G223600 Sobic009G048000--Sobic007G223600 Sobic009G176500 Sobic009G176500 Sobic004G315000--Sobic009G176500 Sobic001G282900 Sobic001G282900 Sobic004G315000--Sobic001G282900 Sobic002G379200 Sobic002G379200 Sobic004G315000--Sobic002G379200 Sobic010G216400 Sobic010G216400 Sobic004G315000--Sobic010G216400 Sobic002G227300 Sobic002G227300 Sobic004G315000--Sobic002G227300 Sobic009G186600 Sobic009G186600 Sobic004G315000--Sobic009G186600 Sobic001G533400 Sobic001G533400 Sobic004G315000--Sobic001G533400 Sobic006G224000 Sobic006G224000 Sobic004G315000--Sobic006G224000 Sobic002G183400 Sobic002G183400 Sobic004G315000--Sobic002G183400 Sobic003G266400 Sobic003G266400 Sobic003G364900--Sobic003G266400 Sobic006G236800 Sobic006G236800 Sobic003G364900--Sobic006G236800 Sobic003G364900--Sobic003G105500 Sobic010G018500 Sobic010G018500 Sobic003G364900--Sobic010G018500 Sobic010G051100 Sobic010G051100 Sobic003G364900--Sobic010G051100 Sobic002G232400 Sobic002G232400 Sobic003G364900--Sobic002G232400 Sobic002G090500 Sobic002G090500 Sobic003G364900--Sobic002G090500 Sobic010G042600 Sobic010G042600 Sobic003G364900--Sobic010G042600 Sobic001G131600 Sobic001G131600 Sobic003G364900--Sobic001G131600 Sobic001G360800 Sobic001G360800 Sobic004G221300--Sobic001G360800 Sobic009G034300 Sobic009G034300 Sobic004G221300--Sobic009G034300 Sobic004G221300--Sobic001G409100 Sobic003G410800 Sobic003G410800 Sobic004G221300--Sobic003G410800 Sobic004G221300--Sobic003G296400 Sobic004G221300--Sobic008G110200 Sobic004G221300--Sobic001G224300 Sobic009G220100 Sobic009G220100 Sobic004G221300--Sobic009G220100 Sobic006G036400 Sobic006G036400 Sobic004G221300--Sobic006G036400 Sobic009G189200 Sobic009G189200 Sobic003G072900--Sobic009G189200 Sobic002G236700 Sobic002G236700 Sobic003G072900--Sobic002G236700 Sobic010G144900 Sobic010G144900 Sobic003G072900--Sobic010G144900 Sobic001G336050 Sobic001G336050 Sobic003G072900--Sobic001G336050 Sobic006G120700 Sobic006G120700 Sobic003G072900--Sobic006G120700 Sobic003G122200 Sobic003G122200 Sobic003G072900--Sobic003G122200 Sobic003G396600 Sobic003G396600 Sobic003G072900--Sobic003G396600 Sobic003G084300 Sobic003G084300 Sobic003G072900--Sobic003G084300 Sobic009G111400 Sobic009G111400 Sobic003G072900--Sobic009G111400 Sobic003G105500--Sobic003G364900 Sobic006G149300 Sobic006G149300 Sobic003G105500--Sobic006G149300 Sobic003G132500 Sobic003G132500 Sobic003G105500--Sobic003G132500 Sobic007G063100 Sobic007G063100 Sobic003G105500--Sobic007G063100 Sobic001G305300 Sobic001G305300 Sobic003G105500--Sobic001G305300 Sobic001G382700 Sobic001G382700 Sobic003G105500--Sobic001G382700 Sobic001G196600 Sobic001G196600 Sobic003G105500--Sobic001G196600 Sobic001G447800 Sobic001G447800 Sobic003G105500--Sobic001G447800 Sobic001G026800 Sobic001G026800 Sobic003G105500--Sobic001G026800 Sobic003G135400 Sobic003G135400 Sobic008G141200--Sobic003G135400 Sobic009G206500 Sobic009G206500 Sobic008G141200--Sobic009G206500 Sobic003G420100 Sobic003G420100 Sobic008G141200--Sobic003G420100 Sobic009G059500 Sobic009G059500 Sobic008G141200--Sobic009G059500 Sobic008G141200--Sobic003G247600 Sobic010G131400 Sobic010G131400 Sobic008G141200--Sobic010G131400 Sobic008G141200--Sobic009G189200 Sobic009G214100 Sobic009G214100 Sobic008G141200--Sobic009G214100 Sobic004G066900 Sobic004G066900 Sobic008G141200--Sobic004G066900
Octagon: transcription factors


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