Gene annotation
Transcriptome id Sobic.001G198900.1
Synonym Sb01g017530
Functional annotation expressed protein
UniProt C5WWB2
Pfam PF07086
Panther DB PTHR20955
NCBI CDD KOG4054; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology GO:0007029; endoplasmic reticulum organization GO:0005789endoplasmic reticulum membrane


Orthologs (automatic annotation)
TAIR AT5G51510 : -
RAP-DB (Rice) LOC_Os10g36480.1 : expressed protein
MaizeGDB (Corn) Zm00025a006369
Brachypodium KQJ97451
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.001G198900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G344301 - -
2 Sobic.001G220200 exo70 exocyst complex subunit domain containing protein, expressed -
3 Sobic.010G158100 zinc finger, C3HC4 type domain containing protein, expressed -
4 Sobic.010G096801 - -
5 Sobic.004G357066 - -
6 Sobic.004G357033 - -
7 Sobic.001G197500 - -
8 Sobic.005G027032 - -
9 Sobic.002G326050 - -
10 Sobic.004G082151 - -
11 Sobic.010G158766 - -
12 Sobic.003G427500 cytochrome P450, putative, expressed -
13 Sobic.001G139600 - -
14 Sobic.001G223400 glucosyltransferase, putative, expressed -
15 Sobic.001G410800 OsTOP6A3 - Topoisomerase 6 subunit A homolog 3, expressed K10878: meiotic recombination protein SPO11
16 Sobic.001G206800 - -
17 Sobic.002G218200 protein kinase domain containing protein, expressed -
18 Sobic.005G232200 expressed protein -
19 Sobic.002G140100 expressed protein -
20 Sobic.004G152501 - -


Gene co-expression network
sample Sobic001G198900 Sobic001G198900 Sobic004G344301 Sobic004G344301 Sobic001G198900--Sobic004G344301 Sobic001G220200 Sobic001G220200 Sobic001G198900--Sobic001G220200 Sobic010G158100 Sobic010G158100 Sobic001G198900--Sobic010G158100 Sobic010G096801 Sobic010G096801 Sobic001G198900--Sobic010G096801 Sobic004G357066 Sobic004G357066 Sobic001G198900--Sobic004G357066 Sobic004G357033 Sobic004G357033 Sobic001G198900--Sobic004G357033 Sobic001G197500 Sobic001G197500 Sobic001G198900--Sobic001G197500 Sobic005G027032 Sobic005G027032 Sobic001G198900--Sobic005G027032 Sobic002G326050 Sobic002G326050 Sobic001G198900--Sobic002G326050 Sobic004G344301--Sobic004G357033 Sobic004G344301--Sobic001G220200 Sobic004G344301--Sobic004G357066 Sobic004G225450 Sobic004G225450 Sobic004G344301--Sobic004G225450 Sobic010G158766 Sobic010G158766 Sobic004G344301--Sobic010G158766 Sobic001G223400 Sobic001G223400 Sobic004G344301--Sobic001G223400 Sobic003G427500 Sobic003G427500 Sobic004G344301--Sobic003G427500 Sobic001G519300 Sobic001G519300 Sobic004G344301--Sobic001G519300 Sobic010G074980 Sobic010G074980 Sobic004G344301--Sobic010G074980 Sobic001G220200--Sobic010G158766 Sobic001G410800 Sobic001G410800 Sobic001G220200--Sobic001G410800 Sobic001G220200--Sobic004G357033 Sobic001G220200--Sobic004G344301 Sobic001G220200--Sobic010G096801 Sobic007G224600 Sobic007G224600 Sobic001G220200--Sobic007G224600 Sobic001G220200--Sobic001G519300 Sobic009G225300 Sobic009G225300 Sobic001G220200--Sobic009G225300 Sobic001G220200--Sobic004G357066 Sobic001G139600 Sobic001G139600 Sobic010G158100--Sobic001G139600 Sobic010G158100--Sobic002G326050 Sobic002G140100 Sobic002G140100 Sobic010G158100--Sobic002G140100 Sobic002G218200 Sobic002G218200 Sobic010G158100--Sobic002G218200 Sobic010G158100--Sobic001G410800 Sobic010G158100--Sobic001G220200 Sobic005G232200 Sobic005G232200 Sobic010G158100--Sobic005G232200 Sobic010G158100--Sobic010G158766 Sobic001G535601 Sobic001G535601 Sobic010G158100--Sobic001G535601 Sobic010G096801--Sobic004G357066 Sobic010G096801--Sobic001G220200 Sobic001G206800 Sobic001G206800 Sobic010G096801--Sobic001G206800 Sobic010G096801--Sobic001G410800 Sobic001G261553 Sobic001G261553 Sobic010G096801--Sobic001G261553 Sobic010G096801--Sobic004G357033 Sobic010G096801--Sobic010G158766 Sobic010G096801--Sobic001G139600 Sobic010G096801--Sobic002G218200 Sobic004G357066--Sobic004G225450 Sobic004G357066--Sobic004G357033 Sobic004G357066--Sobic010G096801 Sobic004G357066--Sobic001G261553 Sobic004G357066--Sobic005G027032 Sobic004G357066--Sobic004G344301 Sobic004G357066--Sobic001G220200 Sobic004G357066--Sobic001G139600 Sobic004G357066--Sobic001G410800 Sobic004G357033--Sobic004G344301 Sobic004G357033--Sobic001G220200 Sobic004G357033--Sobic004G225450 Sobic004G357033--Sobic004G357066 Sobic004G357033--Sobic001G410800 Sobic010G136601 Sobic010G136601 Sobic004G357033--Sobic010G136601 Sobic004G357033--Sobic001G223400 Sobic004G357033--Sobic010G158766 Sobic002G285800 Sobic002G285800 Sobic004G357033--Sobic002G285800 Sobic004G199000 Sobic004G199000 Sobic001G197500--Sobic004G199000 Sobic001G197500--Sobic001G139600 Sobic001G197500--Sobic010G096801 Sobic001G197500--Sobic001G220200 Sobic009G004000 Sobic009G004000 Sobic001G197500--Sobic009G004000 Sobic001G197500--Sobic002G140100 Sobic001G197500--Sobic001G261553 Sobic010G206700 Sobic010G206700 Sobic001G197500--Sobic010G206700 Sobic001G197500--Sobic005G232200 Sobic005G027032--Sobic004G357066 Sobic001G062400 Sobic001G062400 Sobic005G027032--Sobic001G062400 Sobic005G027032--Sobic004G357033 Sobic005G027032--Sobic004G344301 Sobic005G027032--Sobic010G096801 Sobic005G027032--Sobic001G206800 Sobic005G027032--Sobic001G261553 Sobic005G027032--Sobic004G225450 Sobic005G027032--Sobic001G220200 Sobic002G326050--Sobic002G140100 Sobic002G326050--Sobic010G158100 Sobic002G326050--Sobic001G139600 Sobic006G227800 Sobic006G227800 Sobic002G326050--Sobic006G227800 Sobic001G158000 Sobic001G158000 Sobic002G326050--Sobic001G158000 Sobic002G326050--Sobic001G220200 Sobic002G326050--Sobic001G519300 Sobic002G326050--Sobic002G218200 Sobic002G326050--Sobic004G357033
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.