Gene annotation
Transcriptome id Sobic.001G209200.1
Synonym Sb01g018480
Functional annotation secretory protein, putative, expressed
UniProt C5WXD6
Pfam PF04450
Panther DB PTHR33321 PTHR33321:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G15220 : Plant basic secretory protein (BSP) family protein
RAP-DB (Rice) LOC_Os10g34910.1 : secretory protein, putative, expressed
MaizeGDB (Corn) Zm00025a006507
Brachypodium KQJ97253
Barley HORVU1Hr1G044000.1 , HORVU1Hr1G044000.2 , HORVU6Hr1G013710.1
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.001G209200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G130800 Acyl activating enzyme 1 AAE1 (At)(PubMedID : 27208977)@AMP-binding enzyme, putative, expressed K00666: fatty-acyl-CoA synthase
2 Sobic.008G046400 - -
3 Sobic.002G100200 expressed protein -
4 Sobic.003G310200 ctr copper transporter family protein, putative, expressed K14686: SLC31A1, solute carrier family 31 (copper transporter), member 1
5 Sobic.007G215500 OsWAK73 - OsWAK receptor-like protein kinase, expressed -
6 Sobic.001G448300 phytosulfokines precursor, putative, expressed -
7 Sobic.008G111300 transporter family protein, putative, expressed -
8 Sobic.006G243200 L-asparaginase precursor protein, putative, expressed K13051: ASRGL1, L-asparaginase / beta-aspartyl-peptidase
9 Sobic.007G089300 TKL_IRAK_DUF26-lc.7 - DUF26 kinases have homology to DUF26 containing loci, expressed -
10 Sobic.003G361900 dehydrodolichyl diphosphate synthase, putative, expressed K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase
11 Sobic.008G060300 transcription factor(PubMedID : 30367619)@WRKY45, expressed -
12 Sobic.004G164200 heavy metal-associated domain containing protein, expressed K07213: ATOX1, ATX1, copZ, copper chaperone
13 Sobic.003G397600 expressed protein -
14 Sobic.003G378301 - K17362: acyl-coenzyme A thioesterase 13
15 Sobic.004G217700 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein
16 Sobic.001G362001 Probable serine/threonineprotein kinase PBL15(PubMedID : 31721651) -
17 Sobic.004G174000 expressed protein -
18 Sobic.003G096500 protein kinase domain containing protein, expressed -
19 Sobic.003G261900 expressed protein -
20 Sobic.005G045200 homeobox domain containing protein, expressed -


Gene co-expression network
sample Sobic001G209200 Sobic001G209200 Sobic010G130800 Sobic010G130800 Sobic001G209200--Sobic010G130800 Sobic008G046400 Sobic008G046400 Sobic001G209200--Sobic008G046400 Sobic002G100200 Sobic002G100200 Sobic001G209200--Sobic002G100200 Sobic003G310200 Sobic003G310200 Sobic001G209200--Sobic003G310200 Sobic007G215500 Sobic007G215500 Sobic001G209200--Sobic007G215500 Sobic001G448300 Sobic001G448300 Sobic001G209200--Sobic001G448300 Sobic008G111300 Sobic008G111300 Sobic001G209200--Sobic008G111300 Sobic006G243200 Sobic006G243200 Sobic001G209200--Sobic006G243200 Sobic007G089300 Sobic007G089300 Sobic001G209200--Sobic007G089300 Sobic010G130800--Sobic003G310200 Sobic003G378301 Sobic003G378301 Sobic010G130800--Sobic003G378301 Sobic008G060300 Sobic008G060300 Sobic010G130800--Sobic008G060300 Sobic006G060800 Sobic006G060800 Sobic010G130800--Sobic006G060800 Sobic010G130800--Sobic001G448300 Sobic010G130800--Sobic007G089300 Sobic001G056400 Sobic001G056400 Sobic010G130800--Sobic001G056400 Sobic001G012000 Sobic001G012000 Sobic010G130800--Sobic001G012000 Sobic003G096500 Sobic003G096500 Sobic010G130800--Sobic003G096500 Sobic008G046400--Sobic002G100200 Sobic003G397600 Sobic003G397600 Sobic008G046400--Sobic003G397600 Sobic002G108500 Sobic002G108500 Sobic008G046400--Sobic002G108500 Sobic008G046400--Sobic010G130800 Sobic010G177800 Sobic010G177800 Sobic008G046400--Sobic010G177800 Sobic008G046400--Sobic007G215500 Sobic010G178000 Sobic010G178000 Sobic008G046400--Sobic010G178000 Sobic008G046400--Sobic001G209200 Sobic002G272700 Sobic002G272700 Sobic008G046400--Sobic002G272700 Sobic002G100200--Sobic008G046400 Sobic002G100200--Sobic007G215500 Sobic002G100200--Sobic010G130800 Sobic002G100200--Sobic001G209200 Sobic002G100200--Sobic010G177800 Sobic002G100200--Sobic010G178000 Sobic002G100200--Sobic002G108500 Sobic002G100200--Sobic003G397600 Sobic009G037200 Sobic009G037200 Sobic002G100200--Sobic009G037200 SobicK044407 SobicK044407 Sobic003G310200--SobicK044407 Sobic003G310200--Sobic001G012000 Sobic003G310200--Sobic003G378301 Sobic003G310200--Sobic001G056400 Sobic008G181801 Sobic008G181801 Sobic003G310200--Sobic008G181801 Sobic006G045000 Sobic006G045000 Sobic003G310200--Sobic006G045000 Sobic002G423600 Sobic002G423600 Sobic003G310200--Sobic002G423600 Sobic004G217700 Sobic004G217700 Sobic003G310200--Sobic004G217700 Sobic003G310200--Sobic010G130800 Sobic007G215500--Sobic002G100200 Sobic010G273700 Sobic010G273700 Sobic007G215500--Sobic010G273700 Sobic007G215500--Sobic008G046400 Sobic007G215500--Sobic010G177800 Sobic007G215500--Sobic003G397600 Sobic003G138400 Sobic003G138400 Sobic007G215500--Sobic003G138400 Sobic007G215500--Sobic010G130800 Sobic007G025900 Sobic007G025900 Sobic007G215500--Sobic007G025900 Sobic007G215500--Sobic001G209200 Sobic001G448300--Sobic004G217700 Sobic001G448300--Sobic010G130800 Sobic002G040400 Sobic002G040400 Sobic001G448300--Sobic002G040400 Sobic009G014600 Sobic009G014600 Sobic001G448300--Sobic009G014600 Sobic001G056500 Sobic001G056500 Sobic001G448300--Sobic001G056500 Sobic001G448300--Sobic001G056400 Sobic001G125700 Sobic001G125700 Sobic001G448300--Sobic001G125700 Sobic007G076000 Sobic007G076000 Sobic001G448300--Sobic007G076000 Sobic007G055600 Sobic007G055600 Sobic001G448300--Sobic007G055600 Sobic004G068700 Sobic004G068700 Sobic008G111300--Sobic004G068700 Sobic003G214000 Sobic003G214000 Sobic008G111300--Sobic003G214000 Sobic001G179100 Sobic001G179100 Sobic008G111300--Sobic001G179100 Sobic004G078600 Sobic004G078600 Sobic008G111300--Sobic004G078600 Sobic001G201800 Sobic001G201800 Sobic008G111300--Sobic001G201800 Sobic003G361900 Sobic003G361900 Sobic008G111300--Sobic003G361900 Sobic001G320700 Sobic001G320700 Sobic008G111300--Sobic001G320700 Sobic004G209500 Sobic004G209500 Sobic008G111300--Sobic004G209500 Sobic003G402200 Sobic003G402200 Sobic008G111300--Sobic003G402200 Sobic005G186700 Sobic005G186700 Sobic006G243200--Sobic005G186700 Sobic006G243200--Sobic003G096500 Sobic004G051100 Sobic004G051100 Sobic006G243200--Sobic004G051100 Sobic006G164300 Sobic006G164300 Sobic006G243200--Sobic006G164300 Sobic006G020200 Sobic006G020200 Sobic006G243200--Sobic006G020200 Sobic006G123500 Sobic006G123500 Sobic006G243200--Sobic006G123500 Sobic009G202400 Sobic009G202400 Sobic006G243200--Sobic009G202400 Sobic004G019100 Sobic004G019100 Sobic006G243200--Sobic004G019100 Sobic004G019400 Sobic004G019400 Sobic006G243200--Sobic004G019400 Sobic001G362001 Sobic001G362001 Sobic007G089300--Sobic001G362001 Sobic007G089300--Sobic006G060800 Sobic007G089300--Sobic003G310200 Sobic002G041800 Sobic002G041800 Sobic007G089300--Sobic002G041800 Sobic007G089300--Sobic008G060300 Sobic003G366100 Sobic003G366100 Sobic007G089300--Sobic003G366100 Sobic007G089300--Sobic010G130800 Sobic005G193600 Sobic005G193600 Sobic007G089300--Sobic005G193600 Sobic007G089300--Sobic008G181801
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.