Gene annotation
Transcriptome id Sobic.001G262400.1
Synonym GK, EMB22, AT-ACC1, ACC1, PAS3
Functional annotation acetyl-CoA carboxylase, putative, expressed
UniProt A0A1Z5S7N4
Pfam PF00364 PF13535 PF02785 PF00289 PF01039 PF08326
Panther DB PTHR18866 PTHR18866:SF106
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006633; fatty acid biosynthetic process GO:0005524ATP binding GO:0003989acetyl-CoA carboxylase activity


Orthologs (automatic annotation)
TAIR AT1G36160 : acetyl-CoA carboxylase 1
RAP-DB (Rice) LOC_Os10g21910.1 : acetyl-CoA carboxylase, putative, expressed
MaizeGDB (Corn) Zm00025a017932 , Zm00025a031191 , Zm00025a004217 , Zm00025a056672
Brachypodium KQJ96528
Barley HORVU2Hr1G010440.11 , HORVU2Hr1G010440.10 , HORVU2Hr1G010440.13 , HORVU2Hr1G010440.12 , HORVU2Hr1G010440.15 , HORVU2Hr1G010440.17 , HORVU2Hr1G010440.16 , HORVU2Hr1G010440.19 , HORVU2Hr1G010440.18 , HORVU3Hr1G105880.34 , HORVU3Hr1G105880.33 , HORVU3Hr1G105880.32 , HORVU3Hr1G105880.31 , HORVU3Hr1G105880.30 , HORVU5Hr1G116770.10 , HORVU5Hr1G116770.9 , HORVU5Hr1G116770.8 , HORVU5Hr1G116770.5 , HORVU5Hr1G116770.4 , HORVU5Hr1G116770.7 , HORVU5Hr1G116770.6 , HORVU5Hr1G116770.1 , HORVU5Hr1G116770.3 , HORVU5Hr1G116770.2 , HORVU3Hr1G105880.28 , HORVU3Hr1G105880.29 , HORVU3Hr1G105880.24 , HORVU3Hr1G105880.25 , HORVU3Hr1G105880.26 , HORVU3Hr1G105880.27 , HORVU3Hr1G105880.20 , HORVU3Hr1G105880.21 , HORVU3Hr1G105880.22 , HORVU3Hr1G105880.23 , HORVU3Hr1G105880.11 , HORVU3Hr1G105880.10 , HORVU3Hr1G105880.13 , HORVU3Hr1G105880.12 , HORVU3Hr1G105880.15 , HORVU3Hr1G105880.14 , HORVU3Hr1G105880.17 , HORVU3Hr1G105880.16 , HORVU3Hr1G105880.19 , HORVU3Hr1G105880.18 , HORVU2Hr1G010440.42 , HORVU2Hr1G010440.43 , HORVU2Hr1G010440.40 , HORVU2Hr1G010440.41 , HORVU2Hr1G010440.5 , HORVU2Hr1G010440.4 , HORVU2Hr1G010440.7 , HORVU2Hr1G010440.6 , HORVU2Hr1G010440.1 , HORVU2Hr1G010440.3 , HORVU2Hr1G010440.2 , HORVU2Hr1G010440.9 , HORVU2Hr1G010440.8 , HORVU2Hr1G010440.37 , HORVU2Hr1G010440.39 , HORVU2Hr1G010440.38 , HORVU5Hr1G116770.11 , HORVU2Hr1G010440.36 , HORVU2Hr1G010440.35 , HORVU2Hr1G010440.34 , HORVU2Hr1G010440.33 , HORVU2Hr1G010440.32 , HORVU2Hr1G010440.31 , HORVU2Hr1G010440.30 , HORVU2Hr1G010440.28 , HORVU2Hr1G010440.29 , HORVU2Hr1G010440.24 , HORVU2Hr1G010440.25 , HORVU2Hr1G010440.26 , HORVU2Hr1G010440.27 , HORVU2Hr1G010440.20 , HORVU2Hr1G010440.21 , HORVU2Hr1G010440.22 , HORVU2Hr1G010440.23 , HORVU3Hr1G105880.5 , HORVU3Hr1G105880.4 , HORVU3Hr1G105880.7 , HORVU3Hr1G105880.6 , HORVU3Hr1G105880.1 , HORVU3Hr1G105880.3 , HORVU3Hr1G105880.2 , HORVU3Hr1G105880.9 , HORVU3Hr1G105880.8
Wheat TraesCS5B02G510700 , TraesCS2D02G068100 , TraesCS3B02G532000 , TraesCS3D02G479900 , TraesCS2B02G082500 , TraesCS3A02G484800 , TraesCS2A02G069400 , TraesCS4A02G363100 , TraesCS5D02G510500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G099500 ankyrin repeat family protein, putative, expressed -
2 Sobic.008G154801 - -
3 Sobic.003G421900 glycosyl hydrolases family 17, putative, expressed -
4 Sobic.005G077633 - -
5 Sobic.006G232500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nuclease PA3, putative, expressed -
6 Sobic.010G061700 jp18, putative, expressed -
7 Sobic.010G189700 aspartic proteinase, putative, expressed -
8 Sobic.006G142233 - -
9 Sobic.001G267300 ubiquitin family protein, putative, expressed -
10 Sobic.002G008200 flavin-containing monooxygenase family protein, putative, expressed -
11 Sobic.003G153500 GDSL-like lipase/acylhydrolase, putative, expressed -
12 Sobic.007G093300 expressed protein -
13 Sobic.010G118300 auxin-independent growth promoter protein, putative, expressed -
14 Sobic.001G369300 cytochrome P450, putative, expressed -
15 Sobic.006G038850 - -
16 Sobic.002G240800 - -
17 Sobic.006G068100 Ser/Thr protein phosphatase family protein, putative, expressed -
18 Sobic.009G248000 harpin-induced protein 1 domain containing protein, expressed -
19 Sobic.004G157950 - -
20 Sobic.002G135500 Cupin domain containing protein, expressed -


Gene co-expression network
sample Sobic001G262400 Sobic001G262400 Sobic001G099500 Sobic001G099500 Sobic001G262400--Sobic001G099500 Sobic008G154801 Sobic008G154801 Sobic001G262400--Sobic008G154801 Sobic003G421900 Sobic003G421900 Sobic001G262400--Sobic003G421900 Sobic005G077633 Sobic005G077633 Sobic001G262400--Sobic005G077633 Sobic006G232500 Sobic006G232500 Sobic001G262400--Sobic006G232500 Sobic010G061700 Sobic010G061700 Sobic001G262400--Sobic010G061700 Sobic010G189700 Sobic010G189700 Sobic001G262400--Sobic010G189700 Sobic006G142233 Sobic006G142233 Sobic001G262400--Sobic006G142233 Sobic001G267300 Sobic001G267300 Sobic001G262400--Sobic001G267300 Sobic006G068100 Sobic006G068100 Sobic001G099500--Sobic006G068100 Sobic001G099500--Sobic001G262400 Sobic008G182000 Sobic008G182000 Sobic001G099500--Sobic008G182000 Sobic002G240800 Sobic002G240800 Sobic001G099500--Sobic002G240800 Sobic003G229800 Sobic003G229800 Sobic001G099500--Sobic003G229800 Sobic001G099500--Sobic010G061700 Sobic002G387600 Sobic002G387600 Sobic001G099500--Sobic002G387600 Sobic001G099500--Sobic008G154801 Sobic001G099500--Sobic006G232500 Sobic002G315500 Sobic002G315500 Sobic008G154801--Sobic002G315500 Sobic006G212400 Sobic006G212400 Sobic008G154801--Sobic006G212400 Sobic002G366000 Sobic002G366000 Sobic008G154801--Sobic002G366000 Sobic005G004000 Sobic005G004000 Sobic008G154801--Sobic005G004000 Sobic008G154700 Sobic008G154700 Sobic008G154801--Sobic008G154700 Sobic001G093000 Sobic001G093000 Sobic008G154801--Sobic001G093000 Sobic003G360700 Sobic003G360700 Sobic008G154801--Sobic003G360700 Sobic007G093300 Sobic007G093300 Sobic008G154801--Sobic007G093300 Sobic009G254000 Sobic009G254000 Sobic008G154801--Sobic009G254000 Sobic009G009800 Sobic009G009800 Sobic003G421900--Sobic009G009800 Sobic006G244500 Sobic006G244500 Sobic003G421900--Sobic006G244500 Sobic006G096200 Sobic006G096200 Sobic003G421900--Sobic006G096200 Sobic010G136300 Sobic010G136300 Sobic003G421900--Sobic010G136300 Sobic001G368900 Sobic001G368900 Sobic003G421900--Sobic001G368900 Sobic008G037000 Sobic008G037000 Sobic003G421900--Sobic008G037000 Sobic001G277800 Sobic001G277800 Sobic003G421900--Sobic001G277800 Sobic010G031600 Sobic010G031600 Sobic003G421900--Sobic010G031600 Sobic003G376000 Sobic003G376000 Sobic003G421900--Sobic003G376000 Sobic009G090000 Sobic009G090000 Sobic005G077633--Sobic009G090000 Sobic005G077633--Sobic001G262400 Sobic002G317350 Sobic002G317350 Sobic005G077633--Sobic002G317350 Sobic003G096100 Sobic003G096100 Sobic005G077633--Sobic003G096100 Sobic001G405000 Sobic001G405000 Sobic005G077633--Sobic001G405000 Sobic007G075700 Sobic007G075700 Sobic005G077633--Sobic007G075700 Sobic001G453200 Sobic001G453200 Sobic005G077633--Sobic001G453200 Sobic010G240600 Sobic010G240600 Sobic005G077633--Sobic010G240600 Sobic010G240700 Sobic010G240700 Sobic005G077633--Sobic010G240700 Sobic006G232500--Sobic003G421900 Sobic001G359700 Sobic001G359700 Sobic006G232500--Sobic001G359700 Sobic005G003750 Sobic005G003750 Sobic006G232500--Sobic005G003750 Sobic003G153500 Sobic003G153500 Sobic006G232500--Sobic003G153500 Sobic001G196700 Sobic001G196700 Sobic006G232500--Sobic001G196700 Sobic007G172100 Sobic007G172100 Sobic006G232500--Sobic007G172100 Sobic010G037200 Sobic010G037200 Sobic006G232500--Sobic010G037200 Sobic010G168500 Sobic010G168500 Sobic006G232500--Sobic010G168500 Sobic006G232500--Sobic001G368900 Sobic010G061700--Sobic003G421900 Sobic001G322832 Sobic001G322832 Sobic010G061700--Sobic001G322832 Sobic004G274500 Sobic004G274500 Sobic010G061700--Sobic004G274500 Sobic010G061700--Sobic001G368900 Sobic006G261200 Sobic006G261200 Sobic010G061700--Sobic006G261200 Sobic009G227201 Sobic009G227201 Sobic010G061700--Sobic009G227201 Sobic007G084800 Sobic007G084800 Sobic010G061700--Sobic007G084800 Sobic003G402100 Sobic003G402100 Sobic010G061700--Sobic003G402100 Sobic010G049800 Sobic010G049800 Sobic010G061700--Sobic010G049800 Sobic003G007900 Sobic003G007900 Sobic010G189700--Sobic003G007900 Sobic004G090000 Sobic004G090000 Sobic010G189700--Sobic004G090000 Sobic008G020700 Sobic008G020700 Sobic010G189700--Sobic008G020700 Sobic008G125400 Sobic008G125400 Sobic010G189700--Sobic008G125400 Sobic010G189700--Sobic003G153500 Sobic009G090100 Sobic009G090100 Sobic010G189700--Sobic009G090100 Sobic004G085800 Sobic004G085800 Sobic010G189700--Sobic004G085800 Sobic004G299700 Sobic004G299700 Sobic010G189700--Sobic004G299700 Sobic008G125300 Sobic008G125300 Sobic010G189700--Sobic008G125300 Sobic008G161601 Sobic008G161601 Sobic006G142233--Sobic008G161601 Sobic005G089900 Sobic005G089900 Sobic006G142233--Sobic005G089900 Sobic006G142233--Sobic007G093300 Sobic006G054400 Sobic006G054400 Sobic006G142233--Sobic006G054400 Sobic006G142233--Sobic010G049800 Sobic006G142233--Sobic010G061700 Sobic006G142233--Sobic008G154801 Sobic006G248600 Sobic006G248600 Sobic006G142233--Sobic006G248600 Sobic008G070200 Sobic008G070200 Sobic006G142233--Sobic008G070200 Sobic006G038850 Sobic006G038850 Sobic001G267300--Sobic006G038850 Sobic010G124200 Sobic010G124200 Sobic001G267300--Sobic010G124200 Sobic003G058600 Sobic003G058600 Sobic001G267300--Sobic003G058600 Sobic005G212400 Sobic005G212400 Sobic001G267300--Sobic005G212400 Sobic002G415300 Sobic002G415300 Sobic001G267300--Sobic002G415300 Sobic002G329500 Sobic002G329500 Sobic001G267300--Sobic002G329500 Sobic001G127700 Sobic001G127700 Sobic001G267300--Sobic001G127700 Sobic008G123600 Sobic008G123600 Sobic001G267300--Sobic008G123600 Sobic002G415400 Sobic002G415400 Sobic001G267300--Sobic002G415400
Octagon: transcription factors


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