Gene annotation
Transcriptome id Sobic.001G099500.1
Synonym Sb01g008890
Functional annotation ankyrin repeat family protein, putative, expressed
UniProt C5WLV4
Pfam PF13962 PF12796
Panther DB PTHR24177 PTHR24177:SF36
NCBI CDD KOG4412; 26S proteasome regulatory complex, subunit PSMD10
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G03670 : ankyrin repeat family protein
RAP-DB (Rice) LOC_Os07g09530.1 : ankyrin repeat family protein, putative, expressed
MaizeGDB (Corn) Zm00025a016862
Brachypodium KQK20472
Barley HORVU3Hr1G087640.2 , HORVU3Hr1G087640.3 , HORVU3Hr1G087640.1 , HORVU3Hr1G087640.4 , HORVU3Hr1G087640.5 , HORVU7Hr1G096820.1
Wheat TraesCS6B02G013000 , TraesCS7B02G317700 , TraesCS7D02G410500 , TraesCS6D02G011400 , TraesCS7A02G417600 , TraesCS3A02G351100 , TraesCS3D02G345200 , TraesCS6B02G013100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G068100 Ser/Thr protein phosphatase family protein, putative, expressed -
2 Sobic.001G262400 acetyl-CoA carboxylase, putative, expressed -
3 Sobic.008G182000 expressed protein -
4 Sobic.002G240800 - -
5 Sobic.003G229800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@X8 domain containing protein, expressed -
6 Sobic.010G061700 jp18, putative, expressed -
7 Sobic.002G387600 expressed protein -
8 Sobic.008G154801 - -
9 Sobic.006G232500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nuclease PA3, putative, expressed -
10 Sobic.004G085800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ICE-like protease p20 domain containing protein, putative, expressed -
11 Sobic.010G189700 aspartic proteinase, putative, expressed -
12 Sobic.001G257100 expressed protein -
13 Sobic.006G212400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@QRT3, putative, expressed -
14 Sobic.001G368900 IQ calmodulin-binding motif family protein, putative, expressed -
15 Sobic.001G359700 expressed protein -
16 Sobic.001G129500 - -
17 Sobic.003G421900 glycosyl hydrolases family 17, putative, expressed -
18 Sobic.010G119900 embryogenesis transmembrane protein, putative, expressed -
19 Sobic.008G169800 galactosyltransferase family protein, putative, expressed -
20 Sobic.004G090000 OsFBX46 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic001G099500 Sobic001G099500 Sobic006G068100 Sobic006G068100 Sobic001G099500--Sobic006G068100 Sobic001G262400 Sobic001G262400 Sobic001G099500--Sobic001G262400 Sobic008G182000 Sobic008G182000 Sobic001G099500--Sobic008G182000 Sobic002G240800 Sobic002G240800 Sobic001G099500--Sobic002G240800 Sobic003G229800 Sobic003G229800 Sobic001G099500--Sobic003G229800 Sobic010G061700 Sobic010G061700 Sobic001G099500--Sobic010G061700 Sobic002G387600 Sobic002G387600 Sobic001G099500--Sobic002G387600 Sobic008G154801 Sobic008G154801 Sobic001G099500--Sobic008G154801 Sobic006G232500 Sobic006G232500 Sobic001G099500--Sobic006G232500 Sobic006G068100--Sobic001G099500 Sobic006G068100--Sobic002G240800 Sobic010G189700 Sobic010G189700 Sobic006G068100--Sobic010G189700 Sobic004G085800 Sobic004G085800 Sobic006G068100--Sobic004G085800 Sobic009G090100 Sobic009G090100 Sobic006G068100--Sobic009G090100 Sobic006G068100--Sobic006G232500 Sobic001G368900 Sobic001G368900 Sobic006G068100--Sobic001G368900 Sobic003G421900 Sobic003G421900 Sobic006G068100--Sobic003G421900 Sobic002G240700 Sobic002G240700 Sobic006G068100--Sobic002G240700 Sobic001G262400--Sobic001G099500 Sobic001G262400--Sobic008G154801 Sobic001G262400--Sobic003G421900 Sobic005G077633 Sobic005G077633 Sobic001G262400--Sobic005G077633 Sobic001G262400--Sobic006G232500 Sobic001G262400--Sobic010G061700 Sobic001G262400--Sobic010G189700 Sobic006G142233 Sobic006G142233 Sobic001G262400--Sobic006G142233 Sobic001G267300 Sobic001G267300 Sobic001G262400--Sobic001G267300 Sobic010G119900 Sobic010G119900 Sobic008G182000--Sobic010G119900 Sobic003G006100 Sobic003G006100 Sobic008G182000--Sobic003G006100 Sobic007G202100 Sobic007G202100 Sobic008G182000--Sobic007G202100 Sobic001G170900 Sobic001G170900 Sobic008G182000--Sobic001G170900 Sobic003G419600 Sobic003G419600 Sobic008G182000--Sobic003G419600 Sobic004G150800 Sobic004G150800 Sobic008G182000--Sobic004G150800 Sobic005G112000 Sobic005G112000 Sobic008G182000--Sobic005G112000 Sobic010G116100 Sobic010G116100 Sobic008G182000--Sobic010G116100 Sobic005G130700 Sobic005G130700 Sobic008G182000--Sobic005G130700 Sobic002G240800--Sobic003G421900 Sobic004G067900 Sobic004G067900 Sobic002G240800--Sobic004G067900 Sobic003G062200 Sobic003G062200 Sobic002G240800--Sobic003G062200 Sobic002G240800--Sobic001G368900 Sobic006G244500 Sobic006G244500 Sobic002G240800--Sobic006G244500 Sobic006G133000 Sobic006G133000 Sobic002G240800--Sobic006G133000 Sobic006G096200 Sobic006G096200 Sobic002G240800--Sobic006G096200 Sobic007G182500 Sobic007G182500 Sobic002G240800--Sobic007G182500 Sobic006G151001 Sobic006G151001 Sobic002G240800--Sobic006G151001 Sobic006G174200 Sobic006G174200 Sobic003G229800--Sobic006G174200 Sobic005G170100 Sobic005G170100 Sobic003G229800--Sobic005G170100 Sobic003G083600 Sobic003G083600 Sobic003G229800--Sobic003G083600 Sobic010G234300 Sobic010G234300 Sobic003G229800--Sobic010G234300 Sobic001G203700 Sobic001G203700 Sobic003G229800--Sobic001G203700 Sobic001G471800 Sobic001G471800 Sobic003G229800--Sobic001G471800 Sobic004G085700 Sobic004G085700 Sobic003G229800--Sobic004G085700 Sobic004G232600 Sobic004G232600 Sobic003G229800--Sobic004G232600 Sobic003G086500 Sobic003G086500 Sobic003G229800--Sobic003G086500 Sobic010G061700--Sobic003G421900 Sobic001G322832 Sobic001G322832 Sobic010G061700--Sobic001G322832 Sobic004G274500 Sobic004G274500 Sobic010G061700--Sobic004G274500 Sobic010G061700--Sobic001G368900 Sobic006G261200 Sobic006G261200 Sobic010G061700--Sobic006G261200 Sobic009G227201 Sobic009G227201 Sobic010G061700--Sobic009G227201 Sobic007G084800 Sobic007G084800 Sobic010G061700--Sobic007G084800 Sobic003G402100 Sobic003G402100 Sobic010G061700--Sobic003G402100 Sobic010G049800 Sobic010G049800 Sobic010G061700--Sobic010G049800 Sobic007G084200 Sobic007G084200 Sobic002G387600--Sobic007G084200 Sobic004G274800 Sobic004G274800 Sobic002G387600--Sobic004G274800 Sobic006G267800 Sobic006G267800 Sobic002G387600--Sobic006G267800 Sobic009G079100 Sobic009G079100 Sobic002G387600--Sobic009G079100 Sobic001G480800 Sobic001G480800 Sobic002G387600--Sobic001G480800 Sobic010G118300 Sobic010G118300 Sobic002G387600--Sobic010G118300 Sobic001G063500 Sobic001G063500 Sobic002G387600--Sobic001G063500 Sobic009G102100 Sobic009G102100 Sobic002G387600--Sobic009G102100 Sobic001G257100 Sobic001G257100 Sobic002G387600--Sobic001G257100 Sobic002G315500 Sobic002G315500 Sobic008G154801--Sobic002G315500 Sobic006G212400 Sobic006G212400 Sobic008G154801--Sobic006G212400 Sobic002G366000 Sobic002G366000 Sobic008G154801--Sobic002G366000 Sobic005G004000 Sobic005G004000 Sobic008G154801--Sobic005G004000 Sobic008G154700 Sobic008G154700 Sobic008G154801--Sobic008G154700 Sobic001G093000 Sobic001G093000 Sobic008G154801--Sobic001G093000 Sobic003G360700 Sobic003G360700 Sobic008G154801--Sobic003G360700 Sobic007G093300 Sobic007G093300 Sobic008G154801--Sobic007G093300 Sobic009G254000 Sobic009G254000 Sobic008G154801--Sobic009G254000 Sobic006G232500--Sobic003G421900 Sobic001G359700 Sobic001G359700 Sobic006G232500--Sobic001G359700 Sobic005G003750 Sobic005G003750 Sobic006G232500--Sobic005G003750 Sobic003G153500 Sobic003G153500 Sobic006G232500--Sobic003G153500 Sobic001G196700 Sobic001G196700 Sobic006G232500--Sobic001G196700 Sobic007G172100 Sobic007G172100 Sobic006G232500--Sobic007G172100 Sobic010G037200 Sobic010G037200 Sobic006G232500--Sobic010G037200 Sobic010G168500 Sobic010G168500 Sobic006G232500--Sobic010G168500 Sobic006G232500--Sobic001G368900
Octagon: transcription factors


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