Gene annotation
Transcriptome id Sobic.001G359700.1
Synonym AtDMP2, DMP2, Sb01g034360
Functional annotation expressed protein
UniProt C5WYP8
Pfam PF05078
Panther DB PTHR31621 PTHR31621:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G21550 : DUF679 domain membrane protein 2
RAP-DB (Rice) LOC_Os03g25440.1 : expressed protein
MaizeGDB (Corn) Zm00025a052307
Brachypodium KQK21549
Barley HORVU7Hr1G100090.1 , HORVU7Hr1G100090.3 , HORVU7Hr1G100090.2
Wheat TraesCS7D02G428000
Populus -


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cDNA sequences
Sobic.001G359700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G232500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nuclease PA3, putative, expressed -
2 Sobic.002G123100 alpha-galactosidase precursor, putative, expressed K07407: E3.2.1.22B, galA, alpha-galactosidase
3 Sobic.001G505300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@RING finger and CHY zinc finger domain-containing protein 1, putative, expressed K10144: RCHY1, RING finger and CHY zinc finger domain-containing protein 1
4 Sobic.001G150300 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
5 Sobic.001G322832 - -
6 Sobic.010G061700 jp18, putative, expressed -
7 Sobic.007G172100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@vignain precursor, putative, expressed K16292: CEP, KDEL-tailed cysteine endopeptidase
8 Sobic.001G442200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, putative, expressed K14379: tartrate-resistant acid phosphatase type 5
9 Sobic.004G085800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ICE-like protease p20 domain containing protein, putative, expressed -
10 Sobic.001G401975 - -
11 Sobic.003G421900 glycosyl hydrolases family 17, putative, expressed -
12 Sobic.009G017000 expressed protein -
13 Sobic.004G338800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
14 Sobic.009G237700 aldose 1-epimerase, putative, expressed K01792: glucose-6-phosphate 1-epimerase
15 Sobic.004G274500 OsFBD8 - F-box and FBD domain containing protein, expressed -
16 Sobic.009G168300 expressed protein -
17 Sobic.010G168500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
18 Sobic.010G037200 SAM dependent carboxyl methyltransferase, putative, expressed -
19 Sobic.004G354600 expressed protein -
20 Sobic.005G003750 - -


Gene co-expression network
sample Sobic001G359700 Sobic001G359700 Sobic006G232500 Sobic006G232500 Sobic001G359700--Sobic006G232500 Sobic002G123100 Sobic002G123100 Sobic001G359700--Sobic002G123100 Sobic001G505300 Sobic001G505300 Sobic001G359700--Sobic001G505300 Sobic001G150300 Sobic001G150300 Sobic001G359700--Sobic001G150300 Sobic001G322832 Sobic001G322832 Sobic001G359700--Sobic001G322832 Sobic010G061700 Sobic010G061700 Sobic001G359700--Sobic010G061700 Sobic007G172100 Sobic007G172100 Sobic001G359700--Sobic007G172100 Sobic001G442200 Sobic001G442200 Sobic001G359700--Sobic001G442200 Sobic004G085800 Sobic004G085800 Sobic001G359700--Sobic004G085800 Sobic003G421900 Sobic003G421900 Sobic006G232500--Sobic003G421900 Sobic006G232500--Sobic001G359700 Sobic005G003750 Sobic005G003750 Sobic006G232500--Sobic005G003750 Sobic003G153500 Sobic003G153500 Sobic006G232500--Sobic003G153500 Sobic001G196700 Sobic001G196700 Sobic006G232500--Sobic001G196700 Sobic006G232500--Sobic007G172100 Sobic010G037200 Sobic010G037200 Sobic006G232500--Sobic010G037200 Sobic010G168500 Sobic010G168500 Sobic006G232500--Sobic010G168500 Sobic001G368900 Sobic001G368900 Sobic006G232500--Sobic001G368900 Sobic002G123100--Sobic001G150300 Sobic004G354600 Sobic004G354600 Sobic002G123100--Sobic004G354600 Sobic007G167300 Sobic007G167300 Sobic002G123100--Sobic007G167300 Sobic001G401975 Sobic001G401975 Sobic002G123100--Sobic001G401975 Sobic001G394900 Sobic001G394900 Sobic002G123100--Sobic001G394900 Sobic003G101200 Sobic003G101200 Sobic002G123100--Sobic003G101200 Sobic003G331100 Sobic003G331100 Sobic002G123100--Sobic003G331100 Sobic002G123100--Sobic001G359700 Sobic001G324800 Sobic001G324800 Sobic002G123100--Sobic001G324800 Sobic001G505300--Sobic001G359700 Sobic004G242000 Sobic004G242000 Sobic001G505300--Sobic004G242000 Sobic001G505300--Sobic001G442200 Sobic001G505300--Sobic006G232500 Sobic001G505300--Sobic002G123100 Sobic010G256200 Sobic010G256200 Sobic001G505300--Sobic010G256200 Sobic005G036300 Sobic005G036300 Sobic001G505300--Sobic005G036300 Sobic009G030400 Sobic009G030400 Sobic001G505300--Sobic009G030400 Sobic004G332800 Sobic004G332800 Sobic001G505300--Sobic004G332800 Sobic001G150300--Sobic002G123100 Sobic001G150300--Sobic001G394900 Sobic001G150300--Sobic003G101200 Sobic001G150300--Sobic001G324800 Sobic001G150300--Sobic004G354600 Sobic004G294100 Sobic004G294100 Sobic001G150300--Sobic004G294100 Sobic001G150300--Sobic001G401975 Sobic009G017000 Sobic009G017000 Sobic001G150300--Sobic009G017000 Sobic006G178400 Sobic006G178400 Sobic001G150300--Sobic006G178400 Sobic009G103900 Sobic009G103900 Sobic001G322832--Sobic009G103900 Sobic004G274500 Sobic004G274500 Sobic001G322832--Sobic004G274500 Sobic001G322832--Sobic009G017000 Sobic001G322832--Sobic004G354600 Sobic001G322832--Sobic001G150300 Sobic008G037100 Sobic008G037100 Sobic001G322832--Sobic008G037100 Sobic001G322832--Sobic010G061700 Sobic001G322832--Sobic002G123100 Sobic001G322832--Sobic001G401975 Sobic010G061700--Sobic003G421900 Sobic010G061700--Sobic001G322832 Sobic010G061700--Sobic004G274500 Sobic010G061700--Sobic001G368900 Sobic006G261200 Sobic006G261200 Sobic010G061700--Sobic006G261200 Sobic009G227201 Sobic009G227201 Sobic010G061700--Sobic009G227201 Sobic007G084800 Sobic007G084800 Sobic010G061700--Sobic007G084800 Sobic003G402100 Sobic003G402100 Sobic010G061700--Sobic003G402100 Sobic010G049800 Sobic010G049800 Sobic010G061700--Sobic010G049800 Sobic001G200900 Sobic001G200900 Sobic007G172100--Sobic001G200900 Sobic009G061900 Sobic009G061900 Sobic007G172100--Sobic009G061900 Sobic009G052400 Sobic009G052400 Sobic007G172100--Sobic009G052400 Sobic005G174000 Sobic005G174000 Sobic007G172100--Sobic005G174000 Sobic004G133600 Sobic004G133600 Sobic007G172100--Sobic004G133600 Sobic005G186300 Sobic005G186300 Sobic007G172100--Sobic005G186300 Sobic002G293100 Sobic002G293100 Sobic007G172100--Sobic002G293100 Sobic002G192600 Sobic002G192600 Sobic007G172100--Sobic002G192600 Sobic004G171600 Sobic004G171600 Sobic007G172100--Sobic004G171600 Sobic007G150700 Sobic007G150700 Sobic001G442200--Sobic007G150700 Sobic004G196800 Sobic004G196800 Sobic001G442200--Sobic004G196800 Sobic005G098700 Sobic005G098700 Sobic001G442200--Sobic005G098700 Sobic001G442200--Sobic010G168500 Sobic001G442200--Sobic007G172100 Sobic001G442200--Sobic010G037200 Sobic001G442200--Sobic002G293100 Sobic005G171800 Sobic005G171800 Sobic001G442200--Sobic005G171800 Sobic007G194100 Sobic007G194100 Sobic001G442200--Sobic007G194100 Sobic002G139900 Sobic002G139900 Sobic004G085800--Sobic002G139900 Sobic010G010600 Sobic010G010600 Sobic004G085800--Sobic010G010600 Sobic001G297300 Sobic001G297300 Sobic004G085800--Sobic001G297300 Sobic007G209700 Sobic007G209700 Sobic004G085800--Sobic007G209700 Sobic004G085800--Sobic001G401975 Sobic007G123000 Sobic007G123000 Sobic004G085800--Sobic007G123000 Sobic001G059800 Sobic001G059800 Sobic004G085800--Sobic001G059800 Sobic004G256400 Sobic004G256400 Sobic004G085800--Sobic004G256400 Sobic002G088000 Sobic002G088000 Sobic004G085800--Sobic002G088000
Octagon: transcription factors


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