Gene annotation
Transcriptome id Sobic.004G338800.1
Synonym Sb04g036640, anac074, NAC074
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
no apical meristem protein, putative, expressed
UniProt C5XV73
Pfam PF02365
Panther DB PTHR31744 PTHR31744:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT4G28530 : NAC domain containing protein 74
RAP-DB (Rice) LOC_Os02g56600.1 : no apical meristem protein, putative, expressed
MaizeGDB (Corn) Zm00025a022545 , Zm00025a032846 , Zm00025a032018 , Zm00025a030670 , Zm00025a010699
Brachypodium KQK18325 , PNT75915 , KQK01269
Barley HORVU0Hr1G017490.7 , HORVU0Hr1G017490.4 , HORVU0Hr1G017490.6 , HORVU0Hr1G017490.9 , HORVU0Hr1G017490.8 , HORVU0Hr1G017490.1 , HORVU0Hr1G017490.2 , HORVU0Hr1G017490.5 , HORVU6Hr1G088890.1
Wheat TraesCS4A02G421300 , TraesCS6D02G362800 , TraesCS6B02G416400 , TraesCS6B02G416500 , TraesCS6D02G362900 , TraesCS3D02G078900 , TraesCS6A02G378600 , TraesCS4A02G420900 , TraesCS6A02G378500 , TraesCS3A02G078400 , TraesCS7A02G068200 , TraesCS6B02G416300
Populus -


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cDNA sequences
Sobic.004G338800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G359700 expressed protein -
2 Sobic.009G208500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@DUF584 domain containing protein, putative, expressed -
3 Sobic.001G430900 ubiquitin fusion protein, putative, expressed -
4 Sobic.001G505300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@RING finger and CHY zinc finger domain-containing protein 1, putative, expressed K10144: RCHY1, RING finger and CHY zinc finger domain-containing protein 1
5 Sobic.006G212400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@QRT3, putative, expressed -
6 Sobic.008G154801 - -
7 Sobic.001G417600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@actin-depolymerizing factor, putative, expressed K05765: cofilin
8 Sobic.003G091550 - -
9 Sobic.003G224700 glycosyltransferase family protein 1, putative, expressed -
10 Sobic.006G232500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nuclease PA3, putative, expressed -
11 Sobic.001G472200 pumilio-family RNA binding repeat containing protein, expressed K17943: pumilio RNA-binding family
12 Sobic.007G018500 galactosyltransferase family protein, putative, expressed -
13 Sobic.010G198100 expressed protein -
14 Sobic.003G095500 glycosyltransferase, putative, expressed -
15 Sobic.010G133700 - -
16 Sobic.010G087700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock 22 kDa protein, mitochondrial precursor, putative, expressed K13993: HSP20 family protein
17 Sobic.010G097300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cellulase, putative, expressed -
18 Sobic.009G088700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cellulase, putative, expressed -
19 Sobic.010G087800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock 22 kDa protein, mitochondrial precursor, putative, expressed K13993: HSP20 family protein
20 Sobic.006G147400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@A NAC transcription factor controlling cell collapse and secondary cell wall composition in the stem(PubMedID : 30309900)@We identified D as a single gene encoding a NAC transcription factor that controls the expression of genes involved in plant PCD (programmed cell death).(PubMedID : 30150370)@"we apply fine-mapping and genome-wide association study (GWAS) to identify a candidate gene underlying D, and use nearly isogenic lines (NILs) to characterize the transcriptional, compositional, and agronomic effects of variation at the D locus."(PubMedID : 31245734)@no apical meristem protein, putative, expressed -


Gene co-expression network
sample Sobic004G338800 Sobic004G338800 Sobic001G359700 Sobic001G359700 Sobic004G338800--Sobic001G359700 Sobic009G208500 Sobic009G208500 Sobic004G338800--Sobic009G208500 Sobic001G430900 Sobic001G430900 Sobic004G338800--Sobic001G430900 Sobic001G505300 Sobic001G505300 Sobic004G338800--Sobic001G505300 Sobic006G212400 Sobic006G212400 Sobic004G338800--Sobic006G212400 Sobic008G154801 Sobic008G154801 Sobic004G338800--Sobic008G154801 Sobic001G417600 Sobic001G417600 Sobic004G338800--Sobic001G417600 Sobic003G091550 Sobic003G091550 Sobic004G338800--Sobic003G091550 Sobic003G224700 Sobic003G224700 Sobic004G338800--Sobic003G224700 Sobic006G232500 Sobic006G232500 Sobic001G359700--Sobic006G232500 Sobic002G123100 Sobic002G123100 Sobic001G359700--Sobic002G123100 Sobic001G359700--Sobic001G505300 Sobic001G150300 Sobic001G150300 Sobic001G359700--Sobic001G150300 Sobic001G322832 Sobic001G322832 Sobic001G359700--Sobic001G322832 Sobic010G061700 Sobic010G061700 Sobic001G359700--Sobic010G061700 Sobic007G172100 Sobic007G172100 Sobic001G359700--Sobic007G172100 Sobic001G442200 Sobic001G442200 Sobic001G359700--Sobic001G442200 Sobic004G085800 Sobic004G085800 Sobic001G359700--Sobic004G085800 Sobic007G178100 Sobic007G178100 Sobic009G208500--Sobic007G178100 Sobic009G208500--Sobic001G417600 Sobic010G133700 Sobic010G133700 Sobic009G208500--Sobic010G133700 Sobic006G220900 Sobic006G220900 Sobic009G208500--Sobic006G220900 Sobic001G251900 Sobic001G251900 Sobic009G208500--Sobic001G251900 Sobic009G208500--Sobic001G430900 Sobic009G208500--Sobic004G338800 Sobic004G246200 Sobic004G246200 Sobic009G208500--Sobic004G246200 Sobic004G074500 Sobic004G074500 Sobic009G208500--Sobic004G074500 Sobic001G430900--Sobic001G417600 Sobic001G430900--Sobic009G208500 Sobic006G139000 Sobic006G139000 Sobic001G430900--Sobic006G139000 Sobic003G272600 Sobic003G272600 Sobic001G430900--Sobic003G272600 Sobic006G115466 Sobic006G115466 Sobic001G430900--Sobic006G115466 Sobic001G430900--Sobic004G338800 Sobic001G430900--Sobic010G133700 Sobic001G430900--Sobic007G178100 Sobic003G214400 Sobic003G214400 Sobic001G430900--Sobic003G214400 Sobic001G505300--Sobic001G359700 Sobic004G242000 Sobic004G242000 Sobic001G505300--Sobic004G242000 Sobic001G505300--Sobic001G442200 Sobic001G505300--Sobic006G232500 Sobic001G505300--Sobic002G123100 Sobic010G256200 Sobic010G256200 Sobic001G505300--Sobic010G256200 Sobic005G036300 Sobic005G036300 Sobic001G505300--Sobic005G036300 Sobic009G030400 Sobic009G030400 Sobic001G505300--Sobic009G030400 Sobic004G332800 Sobic004G332800 Sobic001G505300--Sobic004G332800 Sobic010G139400 Sobic010G139400 Sobic006G212400--Sobic010G139400 Sobic004G093400 Sobic004G093400 Sobic006G212400--Sobic004G093400 Sobic006G212400--Sobic008G154801 Sobic002G160800 Sobic002G160800 Sobic006G212400--Sobic002G160800 Sobic002G315500 Sobic002G315500 Sobic006G212400--Sobic002G315500 Sobic005G004000 Sobic005G004000 Sobic006G212400--Sobic005G004000 Sobic003G095500 Sobic003G095500 Sobic006G212400--Sobic003G095500 Sobic001G123100 Sobic001G123100 Sobic006G212400--Sobic001G123100 Sobic001G080200 Sobic001G080200 Sobic006G212400--Sobic001G080200 Sobic008G154801--Sobic002G315500 Sobic008G154801--Sobic006G212400 Sobic002G366000 Sobic002G366000 Sobic008G154801--Sobic002G366000 Sobic008G154801--Sobic005G004000 Sobic008G154700 Sobic008G154700 Sobic008G154801--Sobic008G154700 Sobic001G093000 Sobic001G093000 Sobic008G154801--Sobic001G093000 Sobic003G360700 Sobic003G360700 Sobic008G154801--Sobic003G360700 Sobic007G093300 Sobic007G093300 Sobic008G154801--Sobic007G093300 Sobic009G254000 Sobic009G254000 Sobic008G154801--Sobic009G254000 Sobic001G417600--Sobic010G133700 Sobic001G417600--Sobic006G139000 Sobic001G280000 Sobic001G280000 Sobic001G417600--Sobic001G280000 Sobic003G036700 Sobic003G036700 Sobic001G417600--Sobic003G036700 Sobic001G082500 Sobic001G082500 Sobic001G417600--Sobic001G082500 Sobic001G417600--Sobic009G208500 Sobic006G147400 Sobic006G147400 Sobic001G417600--Sobic006G147400 Sobic001G417600--Sobic007G178100 Sobic007G194800 Sobic007G194800 Sobic001G417600--Sobic007G194800 Sobic002G220700 Sobic002G220700 Sobic003G091550--Sobic002G220700 Sobic002G121900 Sobic002G121900 Sobic003G091550--Sobic002G121900 Sobic003G274000 Sobic003G274000 Sobic003G091550--Sobic003G274000 Sobic009G088700 Sobic009G088700 Sobic003G091550--Sobic009G088700 Sobic004G215500 Sobic004G215500 Sobic003G091550--Sobic004G215500 Sobic002G263000 Sobic002G263000 Sobic003G091550--Sobic002G263000 Sobic010G087700 Sobic010G087700 Sobic003G091550--Sobic010G087700 Sobic006G228000 Sobic006G228000 Sobic003G091550--Sobic006G228000 Sobic006G111100 Sobic006G111100 Sobic003G091550--Sobic006G111100 Sobic003G224700--Sobic001G123100 Sobic004G145300 Sobic004G145300 Sobic003G224700--Sobic004G145300 Sobic003G224700--Sobic009G254000 Sobic001G123300 Sobic001G123300 Sobic003G224700--Sobic001G123300 Sobic007G106300 Sobic007G106300 Sobic003G224700--Sobic007G106300 Sobic002G343000 Sobic002G343000 Sobic003G224700--Sobic002G343000 Sobic002G284100 Sobic002G284100 Sobic003G224700--Sobic002G284100 Sobic001G369800 Sobic001G369800 Sobic003G224700--Sobic001G369800 Sobic006G200901 Sobic006G200901 Sobic003G224700--Sobic006G200901
Octagon: transcription factors


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