Gene annotation
Transcriptome id Sobic.001G321200.2,Sobic.001G321200.1
Synonym Sb01g031170
Functional annotation armadillo, putative, expressed
UniProt A0A1Z5S8X4 , C5WUL6
Pfam PF00514
Panther DB PTHR23315 PTHR23315:SF97
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G45720 : ARM repeat superfamily protein
RAP-DB (Rice) LOC_Os10g37850.2,LOC_Os10g37850.1 : armadillo, putative, expressed
MaizeGDB (Corn) Zm00025a053630 , Zm00025a003082 , Zm00025a000240
Brachypodium KQJ97515 , KQJ97516 , KQJ97517
Barley HORVU4Hr1G074260.3 , HORVU4Hr1G074260.2 , HORVU1Hr1G048760.8 , HORVU1Hr1G048760.9 , HORVU1Hr1G048760.2 , HORVU1Hr1G048760.3 , HORVU1Hr1G048760.1 , HORVU1Hr1G048760.6 , HORVU1Hr1G048760.7 , HORVU1Hr1G048760.4 , HORVU1Hr1G048760.5 , HORVU4Hr1G085970.1 , HORVU4Hr1G085970.3 , HORVU4Hr1G085970.2
Wheat TraesCS1D02G187900 , TraesCS1B02G196200 , TraesCS3A02G475900
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.001G321200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G286400 - -
2 Sobic.002G045200 protein kinase, putative, expressed -
3 Sobic.009G235700 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
4 Sobic.008G110400 haemolysin-III, putative, expressed K07297: adiponectin receptor
5 Sobic.008G093600 expressed protein -
6 Sobic.002G403000 eukaryotic aspartyl protease domain containing protein, expressed -
7 Sobic.009G128800 expressed protein -
8 Sobic.001G389600 expressed protein -
9 Sobic.002G229700 expressed protein -
10 Sobic.002G382500 heavy metal-associated domain containing protein, expressed -
11 Sobic.009G216300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polygalacturonase, putative, expressed -
12 Sobic.001G522300 leucine-rich repeat transmembrane protein kinase, putative, expressed -
13 Sobic.010G165100 expressed protein -
14 Sobic.003G277200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
15 Sobic.009G211800 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
16 Sobic.009G185900 expressed protein -
17 Sobic.002G246000 expressed protein -
18 Sobic.002G428000 expressed protein -
19 Sobic.003G360700 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
20 Sobic.003G116100 pectinesterase, putative, expressed K01051: pectinesterase


Gene co-expression network
sample Sobic001G321200 Sobic001G321200 Sobic001G286400 Sobic001G286400 Sobic001G321200--Sobic001G286400 Sobic002G045200 Sobic002G045200 Sobic001G321200--Sobic002G045200 Sobic009G235700 Sobic009G235700 Sobic001G321200--Sobic009G235700 Sobic008G110400 Sobic008G110400 Sobic001G321200--Sobic008G110400 Sobic008G093600 Sobic008G093600 Sobic001G321200--Sobic008G093600 Sobic002G403000 Sobic002G403000 Sobic001G321200--Sobic002G403000 Sobic009G128800 Sobic009G128800 Sobic001G321200--Sobic009G128800 Sobic001G389600 Sobic001G389600 Sobic001G321200--Sobic001G389600 Sobic002G229700 Sobic002G229700 Sobic001G321200--Sobic002G229700 Sobic001G522300 Sobic001G522300 Sobic001G286400--Sobic001G522300 Sobic010G014500 Sobic010G014500 Sobic001G286400--Sobic010G014500 Sobic001G074000 Sobic001G074000 Sobic001G286400--Sobic001G074000 Sobic010G014700 Sobic010G014700 Sobic001G286400--Sobic010G014700 Sobic010G092400 Sobic010G092400 Sobic001G286400--Sobic010G092400 Sobic009G129700 Sobic009G129700 Sobic001G286400--Sobic009G129700 Sobic007G116800 Sobic007G116800 Sobic001G286400--Sobic007G116800 Sobic006G270500 Sobic006G270500 Sobic001G286400--Sobic006G270500 Sobic002G222500 Sobic002G222500 Sobic001G286400--Sobic002G222500 Sobic002G045200--Sobic001G389600 Sobic010G211800 Sobic010G211800 Sobic002G045200--Sobic010G211800 Sobic001G074100 Sobic001G074100 Sobic002G045200--Sobic001G074100 Sobic010G165100 Sobic010G165100 Sobic002G045200--Sobic010G165100 Sobic006G241800 Sobic006G241800 Sobic002G045200--Sobic006G241800 Sobic002G045200--Sobic001G522300 Sobic002G362700 Sobic002G362700 Sobic002G045200--Sobic002G362700 Sobic002G311000 Sobic002G311000 Sobic002G045200--Sobic002G311000 Sobic002G142500 Sobic002G142500 Sobic002G045200--Sobic002G142500 Sobic006G125800 Sobic006G125800 Sobic009G235700--Sobic006G125800 Sobic010G020600 Sobic010G020600 Sobic009G235700--Sobic010G020600 Sobic001G221900 Sobic001G221900 Sobic009G235700--Sobic001G221900 Sobic004G248100 Sobic004G248100 Sobic009G235700--Sobic004G248100 Sobic003G339600 Sobic003G339600 Sobic009G235700--Sobic003G339600 Sobic009G235700--Sobic001G522300 Sobic007G165800 Sobic007G165800 Sobic009G235700--Sobic007G165800 Sobic004G283800 Sobic004G283800 Sobic009G235700--Sobic004G283800 Sobic003G360700 Sobic003G360700 Sobic009G235700--Sobic003G360700 Sobic006G219100 Sobic006G219100 Sobic008G110400--Sobic006G219100 Sobic002G382500 Sobic002G382500 Sobic008G110400--Sobic002G382500 Sobic002G068400 Sobic002G068400 Sobic008G110400--Sobic002G068400 Sobic003G041801 Sobic003G041801 Sobic008G110400--Sobic003G041801 Sobic008G110400--Sobic002G403000 Sobic006G015900 Sobic006G015900 Sobic008G110400--Sobic006G015900 Sobic010G027700 Sobic010G027700 Sobic008G110400--Sobic010G027700 Sobic004G215000 Sobic004G215000 Sobic008G110400--Sobic004G215000 Sobic001G179400 Sobic001G179400 Sobic008G110400--Sobic001G179400 Sobic002G319300 Sobic002G319300 Sobic008G093600--Sobic002G319300 Sobic001G155700 Sobic001G155700 Sobic008G093600--Sobic001G155700 Sobic002G360500 Sobic002G360500 Sobic008G093600--Sobic002G360500 Sobic002G417000 Sobic002G417000 Sobic008G093600--Sobic002G417000 Sobic002G313000 Sobic002G313000 Sobic008G093600--Sobic002G313000 Sobic008G093600--Sobic010G211800 Sobic003G307200 Sobic003G307200 Sobic008G093600--Sobic003G307200 Sobic002G394500 Sobic002G394500 Sobic008G093600--Sobic002G394500 Sobic008G006800 Sobic008G006800 Sobic008G093600--Sobic008G006800 Sobic002G403000--Sobic001G389600 Sobic001G478100 Sobic001G478100 Sobic002G403000--Sobic001G478100 Sobic002G428000 Sobic002G428000 Sobic002G403000--Sobic002G428000 Sobic002G403000--Sobic010G165100 Sobic002G403000--Sobic002G045200 Sobic002G403000--Sobic008G110400 Sobic002G246000 Sobic002G246000 Sobic002G403000--Sobic002G246000 Sobic003G277200 Sobic003G277200 Sobic002G403000--Sobic003G277200 Sobic010G107200 Sobic010G107200 Sobic002G403000--Sobic010G107200 Sobic001G518000 Sobic001G518000 Sobic009G128800--Sobic001G518000 Sobic009G128800--Sobic001G522300 Sobic009G216300 Sobic009G216300 Sobic009G128800--Sobic009G216300 Sobic001G093000 Sobic001G093000 Sobic009G128800--Sobic001G093000 Sobic009G128800--Sobic009G235700 Sobic009G128800--Sobic010G211800 Sobic009G128800--Sobic001G286400 Sobic009G128800--Sobic002G360500 Sobic009G128800--Sobic003G360700 Sobic001G389600--Sobic002G403000 Sobic001G389600--Sobic010G165100 Sobic001G389600--Sobic001G478100 Sobic001G389600--Sobic002G045200 Sobic001G389600--Sobic010G107200 Sobic001G389600--Sobic002G142500 Sobic001G389600--Sobic002G246000 Sobic001G389600--Sobic002G428000 Sobic006G032800 Sobic006G032800 Sobic001G389600--Sobic006G032800 Sobic003G300400 Sobic003G300400 Sobic002G229700--Sobic003G300400 Sobic003G309400 Sobic003G309400 Sobic002G229700--Sobic003G309400 Sobic002G229700--Sobic003G339600 Sobic002G229700--Sobic004G283800 Sobic002G032500 Sobic002G032500 Sobic002G229700--Sobic002G032500 Sobic004G342000 Sobic004G342000 Sobic002G229700--Sobic004G342000 Sobic003G338200 Sobic003G338200 Sobic002G229700--Sobic003G338200 Sobic009G254500 Sobic009G254500 Sobic002G229700--Sobic009G254500 Sobic009G174100 Sobic009G174100 Sobic002G229700--Sobic009G174100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.