Gene annotation
Transcriptome id Sobic.001G326700.1
Synonym Sb01g031640
Functional annotation OsFBX238 - F-box domain containing protein, expressed
UniProt A0A1Z5S8Q3
Pfam PF00646
Panther DB PTHR32133 PTHR32133:SF145
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G07610 : F-box family protein
RAP-DB (Rice) LOC_Os07g35060.1 : OsFBX238 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G434100 NB-ARC/LRR disease resistance protein, putative, expressed K13459: disease resistance protein RPS2
2 Sobic.004G302700 YABBY domain containing protein, putative, expressed -
3 Sobic.004G211700 - -
4 Sobic.009G141300 GDSL-like lipase/acylhydrolase, putative, expressed -
5 Sobic.007G115400 receptor-like protein kinase 5 precursor, putative, expressed -
6 Sobic.010G235300 acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
7 Sobic.002G400600 Os7bglu26 - beta-mannosidase/glucosidase/exoglucanase, expressed K05350: beta-glucosidase
8 Sobic.001G286700 homeobox and START domains containing protein, putative, expressed -
9 Sobic.007G211200 inactive receptor kinase At2g26730 precursor, putative, expressed -
10 Sobic.002G186800 strictosidine synthase, putative, expressed -
11 Sobic.010G020600 Receptor-like protein kinase 5 precursor(PubMedID : 28620409)@receptor-like protein kinase 5 precursor, putative, expressed -
12 Sobic.008G097700 transmembrane amino acid transporter protein, putative, expressed -
13 Sobic.004G274600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower and stem, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
14 Sobic.001G135600 GDSL-like lipase/acylhydrolase, putative, expressed -
15 Sobic.001G390400 expressed protein -
16 Sobic.007G142900 receptor-like kinase, putative, expressed -
17 Sobic.004G317200 "Upregulated to a greater extent than that of SbER1 in stem in response to drouht stress, not expredded in roots. SbER2 fusion protein localized on the cell membrane and chloroplast. Net photosynthetic rate and WUE, phenylpropanoid biosynthetic genes expression, and lignin content increased in overexpressing maize."(PubMedID : 31615416)@receptor-like protein kinase 5 precursor, putative, expressed -
18 Sobic.002G011000 expressed protein -
19 Sobic.001G046400 expressed protein -
20 Sobic.009G023900 homeobox domain containing protein, expressed -


Gene co-expression network
sample Sobic001G326700 Sobic001G326700 Sobic001G434100 Sobic001G434100 Sobic001G326700--Sobic001G434100 Sobic004G302700 Sobic004G302700 Sobic001G326700--Sobic004G302700 Sobic004G211700 Sobic004G211700 Sobic001G326700--Sobic004G211700 Sobic009G141300 Sobic009G141300 Sobic001G326700--Sobic009G141300 Sobic007G115400 Sobic007G115400 Sobic001G326700--Sobic007G115400 Sobic010G235300 Sobic010G235300 Sobic001G326700--Sobic010G235300 Sobic002G400600 Sobic002G400600 Sobic001G326700--Sobic002G400600 Sobic001G286700 Sobic001G286700 Sobic001G326700--Sobic001G286700 Sobic007G211200 Sobic007G211200 Sobic001G326700--Sobic007G211200 Sobic007G165800 Sobic007G165800 Sobic001G434100--Sobic007G165800 Sobic004G274600 Sobic004G274600 Sobic001G434100--Sobic004G274600 Sobic001G434100--Sobic001G286700 Sobic003G027100 Sobic003G027100 Sobic001G434100--Sobic003G027100 Sobic001G199400 Sobic001G199400 Sobic001G434100--Sobic001G199400 Sobic001G470200 Sobic001G470200 Sobic001G434100--Sobic001G470200 Sobic007G032100 Sobic007G032100 Sobic001G434100--Sobic007G032100 Sobic001G434100--Sobic010G235300 Sobic004G357000 Sobic004G357000 Sobic001G434100--Sobic004G357000 Sobic001G046400 Sobic001G046400 Sobic004G302700--Sobic001G046400 Sobic003G366000 Sobic003G366000 Sobic004G302700--Sobic003G366000 Sobic001G135600 Sobic001G135600 Sobic004G302700--Sobic001G135600 Sobic006G187000 Sobic006G187000 Sobic004G302700--Sobic006G187000 Sobic004G302700--Sobic009G141300 Sobic008G150500 Sobic008G150500 Sobic004G302700--Sobic008G150500 Sobic003G283900 Sobic003G283900 Sobic004G302700--Sobic003G283900 Sobic002G011000 Sobic002G011000 Sobic004G302700--Sobic002G011000 Sobic004G302700--Sobic007G115400 Sobic004G342000 Sobic004G342000 Sobic004G211700--Sobic004G342000 Sobic009G023900 Sobic009G023900 Sobic004G211700--Sobic009G023900 Sobic003G178500 Sobic003G178500 Sobic004G211700--Sobic003G178500 Sobic004G211700--Sobic001G286700 Sobic004G211700--Sobic003G027100 Sobic005G218000 Sobic005G218000 Sobic004G211700--Sobic005G218000 Sobic001G341700 Sobic001G341700 Sobic004G211700--Sobic001G341700 Sobic002G312200 Sobic002G312200 Sobic004G211700--Sobic002G312200 Sobic010G166300 Sobic010G166300 Sobic004G211700--Sobic010G166300 Sobic009G254500 Sobic009G254500 Sobic009G141300--Sobic009G254500 Sobic009G141300--Sobic002G011000 Sobic009G141300--Sobic001G135600 Sobic009G141300--Sobic004G302700 Sobic001G119200 Sobic001G119200 Sobic009G141300--Sobic001G119200 Sobic003G309400 Sobic003G309400 Sobic009G141300--Sobic003G309400 Sobic009G141300--Sobic004G211700 Sobic009G141300--Sobic004G342000 Sobic002G416400 Sobic002G416400 Sobic009G141300--Sobic002G416400 Sobic007G115400--Sobic004G211700 Sobic007G115400--Sobic004G302700 Sobic007G115400--Sobic001G046400 Sobic007G115400--Sobic009G023900 Sobic006G117900 Sobic006G117900 Sobic007G115400--Sobic006G117900 Sobic005G110900 Sobic005G110900 Sobic007G115400--Sobic005G110900 Sobic007G115400--Sobic003G283900 Sobic004G211800 Sobic004G211800 Sobic007G115400--Sobic004G211800 Sobic007G115400--Sobic001G341700 Sobic010G235300--Sobic001G286700 Sobic005G009600 Sobic005G009600 Sobic010G235300--Sobic005G009600 Sobic006G273600 Sobic006G273600 Sobic010G235300--Sobic006G273600 Sobic010G235300--Sobic003G027100 Sobic007G170100 Sobic007G170100 Sobic010G235300--Sobic007G170100 Sobic010G235300--Sobic007G165800 Sobic010G235300--Sobic010G166300 Sobic010G235300--Sobic003G178500 Sobic002G363300 Sobic002G363300 Sobic010G235300--Sobic002G363300 Sobic003G339600 Sobic003G339600 Sobic002G400600--Sobic003G339600 Sobic002G400600--Sobic004G274600 Sobic003G070600 Sobic003G070600 Sobic002G400600--Sobic003G070600 Sobic003G300400 Sobic003G300400 Sobic002G400600--Sobic003G300400 Sobic003G113500 Sobic003G113500 Sobic002G400600--Sobic003G113500 Sobic002G400600--Sobic004G211700 Sobic010G020600 Sobic010G020600 Sobic002G400600--Sobic010G020600 Sobic002G400600--Sobic007G165800 Sobic008G097700 Sobic008G097700 Sobic002G400600--Sobic008G097700 Sobic001G286700--Sobic010G235300 Sobic001G286700--Sobic003G027100 Sobic001G286700--Sobic002G363300 Sobic001G286700--Sobic004G211700 Sobic001G286700--Sobic006G273600 Sobic001G473500 Sobic001G473500 Sobic001G286700--Sobic001G473500 Sobic003G338700 Sobic003G338700 Sobic001G286700--Sobic003G338700 Sobic005G199700 Sobic005G199700 Sobic001G286700--Sobic005G199700 Sobic001G286700--Sobic007G165800 Sobic007G211200--Sobic001G046400 Sobic007G211200--Sobic004G357000 Sobic003G089300 Sobic003G089300 Sobic007G211200--Sobic003G089300 Sobic002G032500 Sobic002G032500 Sobic007G211200--Sobic002G032500 Sobic007G211200--Sobic004G211700 Sobic007G211200--Sobic004G342000 Sobic007G211200--Sobic003G113500 Sobic007G211200--Sobic001G135600 Sobic002G337600 Sobic002G337600 Sobic007G211200--Sobic002G337600
Octagon: transcription factors


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