Gene annotation
Transcriptome id Sobic.001G327400.1
Synonym
Functional annotation -
UniProt A0A1B6QMD0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G290400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
2 Sobic.002G384800 pentatricopeptide, putative, expressed -
3 Sobic.001G482500 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
4 Sobic.002G289701 - -
5 Sobic.002G013500 pentatricopeptide, putative, expressed -
6 Sobic.008G006900 laccase-23 precursor, putative, expressed K05909: laccase
7 Sobic.001G177500 - -
8 Sobic.001G189800 DNAJ heat shock N-terminal domain-containing protein, putative, expressed -
9 Sobic.001G370100 R3H domain containing protein, expressed -
10 Sobic.002G085700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
11 Sobic.003G298500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@O-methyltransferase, putative, expressed -
12 Sobic.005G030200 zinc finger, C3HC4 type domain containing protein, expressed -
13 Sobic.007G100900 - -
14 Sobic.008G045232 - -
15 Sobic.002G191300 expressed protein -
16 Sobic.002G128750 - -
17 Sobic.004G082050 - K02935: RP-L7, MRPL12, large subunit ribosomal protein L7/L12
18 Sobic.005G205000 F-box/LRR-repeat protein 3, putative, expressed K10268: F-box and leucine-rich repeat protein 2/20
19 Sobic.005G029866 - -
20 Sobic.008G053000 receptor-like protein kinase 5 precursor, putative, expressed -


Gene co-expression network
sample Sobic001G327400 Sobic001G327400 Sobic004G290400 Sobic004G290400 Sobic001G327400--Sobic004G290400 Sobic002G384800 Sobic002G384800 Sobic001G327400--Sobic002G384800 Sobic001G482500 Sobic001G482500 Sobic001G327400--Sobic001G482500 Sobic002G289701 Sobic002G289701 Sobic001G327400--Sobic002G289701 Sobic002G013500 Sobic002G013500 Sobic001G327400--Sobic002G013500 Sobic008G006900 Sobic008G006900 Sobic001G327400--Sobic008G006900 Sobic001G177500 Sobic001G177500 Sobic001G327400--Sobic001G177500 Sobic001G189800 Sobic001G189800 Sobic001G327400--Sobic001G189800 Sobic001G370100 Sobic001G370100 Sobic001G327400--Sobic001G370100 Sobic002G044900 Sobic002G044900 Sobic004G290400--Sobic002G044900 Sobic009G067200 Sobic009G067200 Sobic004G290400--Sobic009G067200 Sobic006G088500 Sobic006G088500 Sobic004G290400--Sobic006G088500 Sobic002G401301 Sobic002G401301 Sobic004G290400--Sobic002G401301 Sobic002G312100 Sobic002G312100 Sobic004G290400--Sobic002G312100 Sobic003G326100 Sobic003G326100 Sobic004G290400--Sobic003G326100 Sobic008G053000 Sobic008G053000 Sobic004G290400--Sobic008G053000 Sobic007G007650 Sobic007G007650 Sobic004G290400--Sobic007G007650 Sobic004G274000 Sobic004G274000 Sobic004G290400--Sobic004G274000 Sobic002G384800--Sobic001G482500 Sobic005G201800 Sobic005G201800 Sobic002G384800--Sobic005G201800 Sobic001G200400 Sobic001G200400 Sobic002G384800--Sobic001G200400 Sobic001G406600 Sobic001G406600 Sobic002G384800--Sobic001G406600 Sobic005G120433 Sobic005G120433 Sobic002G384800--Sobic005G120433 Sobic005G029866 Sobic005G029866 Sobic002G384800--Sobic005G029866 Sobic002G384800--Sobic002G289701 Sobic008G045100 Sobic008G045100 Sobic002G384800--Sobic008G045100 Sobic003G190701 Sobic003G190701 Sobic002G384800--Sobic003G190701 Sobic004G173800 Sobic004G173800 Sobic001G482500--Sobic004G173800 Sobic001G152240 Sobic001G152240 Sobic001G482500--Sobic001G152240 Sobic008G053700 Sobic008G053700 Sobic001G482500--Sobic008G053700 Sobic006G004700 Sobic006G004700 Sobic001G482500--Sobic006G004700 Sobic002G103400 Sobic002G103400 Sobic001G482500--Sobic002G103400 Sobic006G076700 Sobic006G076700 Sobic001G482500--Sobic006G076700 Sobic003G046000 Sobic003G046000 Sobic001G482500--Sobic003G046000 Sobic004G184900 Sobic004G184900 Sobic001G482500--Sobic004G184900 Sobic005G144101 Sobic005G144101 Sobic001G482500--Sobic005G144101 Sobic008G045232 Sobic008G045232 Sobic002G289701--Sobic008G045232 Sobic002G191300 Sobic002G191300 Sobic002G289701--Sobic002G191300 Sobic005G030200 Sobic005G030200 Sobic002G289701--Sobic005G030200 Sobic002G289701--Sobic001G189800 Sobic002G289701--Sobic003G190701 Sobic009G125700 Sobic009G125700 Sobic002G289701--Sobic009G125700 Sobic002G289701--Sobic008G045100 Sobic001G234700 Sobic001G234700 Sobic002G289701--Sobic001G234700 Sobic007G100900 Sobic007G100900 Sobic002G013500--Sobic007G100900 Sobic002G013500--Sobic006G076700 Sobic002G013500--Sobic004G184900 Sobic002G013500--Sobic003G046000 Sobic002G013500--Sobic008G053700 Sobic008G069901 Sobic008G069901 Sobic002G013500--Sobic008G069901 Sobic002G013500--Sobic001G177500 Sobic005G014600 Sobic005G014600 Sobic002G013500--Sobic005G014600 Sobic009G113300 Sobic009G113300 Sobic002G013500--Sobic009G113300 Sobic008G006900--Sobic001G200400 Sobic008G006900--Sobic001G234700 Sobic001G177500--Sobic001G370100 Sobic010G140800 Sobic010G140800 Sobic001G177500--Sobic010G140800 Sobic001G177500--Sobic006G076700 Sobic009G159800 Sobic009G159800 Sobic001G177500--Sobic009G159800 Sobic001G177500--Sobic001G234700 Sobic001G189800--Sobic002G191300 Sobic001G189800--Sobic005G030200 Sobic001G189800--Sobic002G289701 Sobic001G189800--Sobic001G234700 Sobic001G370100--Sobic001G177500 Sobic004G327100 Sobic004G327100 Sobic001G370100--Sobic004G327100 Sobic007G027400 Sobic007G027400 Sobic001G370100--Sobic007G027400 Sobic001G045300 Sobic001G045300 Sobic001G370100--Sobic001G045300 Sobic001G358101 Sobic001G358101 Sobic001G370100--Sobic001G358101 Sobic002G046500 Sobic002G046500 Sobic001G370100--Sobic002G046500 Sobic001G370100--Sobic003G190701 Sobic001G370100--Sobic010G140800 Sobic004G162800 Sobic004G162800 Sobic001G370100--Sobic004G162800
Octagon: transcription factors


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