Gene annotation
Transcriptome id Sobic.001G428300.1
Synonym Sb01g040240, LAP3
Functional annotation strictosidine synthase, putative, expressed
UniProt C5WQ63
Pfam PF08450
Panther DB PTHR10426 PTHR10426:SF21
NCBI CDD KOG1520; Predicted alkaloid synthase/Surface mucin Hemomucin
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G59530 : Calcium-dependent phosphotriesterase superfamily protein
RAP-DB (Rice) LOC_Os03g15710.1 : strictosidine synthase, putative, expressed
MaizeGDB (Corn) Zm00025a052813
Brachypodium KQK22455
Barley HORVU4Hr1G061230.1 , HORVU4Hr1G061230.2
Wheat TraesCS4B02G215300 , TraesCS4A02G089000 , TraesCS4D02G215800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G053500 expressed protein -
2 Sobic.002G157400 ankyrin, putative, expressed -
3 Sobic.008G016500 rhamnogalacturonate lyase, putative, expressed K18195: RGL4, rhamnogalacturonan endolyase
4 Sobic.007G049600 expressed protein -
5 Sobic.003G384200 beta-hexosaminidase precursor, putative, expressed K12373: hexosaminidase
6 Sobic.003G140100 helix-loop-helix DNA-binding domain containing protein, expressed -
7 Sobic.002G360801 - -
8 Sobic.004G223100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@response regulator receiver domain containing protein, expressed K14492: two-component response regulator ARR-A family
9 Sobic.005G226600 zinc finger, C3HC4 type domain containing protein, expressed -
10 Sobic.008G106301 - -
11 Sobic.005G164000 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
12 Sobic.001G359000 expressed protein -
13 Sobic.004G149500 expressed protein -
14 Sobic.002G158401 - -
15 Sobic.006G014632 - -
16 Sobic.010G048000 expressed protein -
17 Sobic.006G082850 - -
18 Sobic.001G369200 terpene synthase, putative, expressed -
19 Sobic.005G006500 - -
20 Sobic.002G129800 LTPL61 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -


Gene co-expression network
sample Sobic001G428300 Sobic001G428300 Sobic010G053500 Sobic010G053500 Sobic001G428300--Sobic010G053500 Sobic002G157400 Sobic002G157400 Sobic001G428300--Sobic002G157400 Sobic008G016500 Sobic008G016500 Sobic001G428300--Sobic008G016500 Sobic007G049600 Sobic007G049600 Sobic001G428300--Sobic007G049600 Sobic003G384200 Sobic003G384200 Sobic001G428300--Sobic003G384200 Sobic003G140100 Sobic003G140100 Sobic001G428300--Sobic003G140100 Sobic002G360801 Sobic002G360801 Sobic001G428300--Sobic002G360801 Sobic004G223100 Sobic004G223100 Sobic001G428300--Sobic004G223100 Sobic005G226600 Sobic005G226600 Sobic001G428300--Sobic005G226600 Sobic010G053500--Sobic002G157400 Sobic010G053500--Sobic003G140100 Sobic010G053500--Sobic001G428300 Sobic010G053500--Sobic007G049600 Sobic010G053500--Sobic002G360801 Sobic010G053500--Sobic008G016500 Sobic010G053500--Sobic003G384200 Sobic010G053500--Sobic005G226600 Sobic010G053500--Sobic004G223100 Sobic002G157400--Sobic010G053500 Sobic002G157400--Sobic003G140100 Sobic002G157400--Sobic007G049600 Sobic002G157400--Sobic001G428300 Sobic002G157400--Sobic002G360801 Sobic002G157400--Sobic008G016500 Sobic002G157400--Sobic005G226600 Sobic002G157400--Sobic004G223100 Sobic005G164000 Sobic005G164000 Sobic002G157400--Sobic005G164000 Sobic008G016500--Sobic001G428300 Sobic008G016500--Sobic003G384200 Sobic008G016500--Sobic010G053500 Sobic008G016500--Sobic002G157400 Sobic008G016500--Sobic003G140100 Sobic008G016500--Sobic007G049600 Sobic008G016500--Sobic002G360801 Sobic001G359000 Sobic001G359000 Sobic008G016500--Sobic001G359000 Sobic008G016500--Sobic005G164000 Sobic007G049600--Sobic002G157400 Sobic007G049600--Sobic010G053500 Sobic007G049600--Sobic001G428300 Sobic007G049600--Sobic003G140100 Sobic007G049600--Sobic002G360801 Sobic007G049600--Sobic005G226600 Sobic007G049600--Sobic008G016500 Sobic007G049600--Sobic004G223100 Sobic007G049600--Sobic003G384200 Sobic003G384200--Sobic001G428300 Sobic003G384200--Sobic008G016500 Sobic003G384200--Sobic010G053500 Sobic003G384200--Sobic002G157400 Sobic003G384200--Sobic007G049600 Sobic003G384200--Sobic003G140100 Sobic003G384200--Sobic002G360801 Sobic004G149500 Sobic004G149500 Sobic003G384200--Sobic004G149500 Sobic002G158401 Sobic002G158401 Sobic003G384200--Sobic002G158401 Sobic003G140100--Sobic002G157400 Sobic003G140100--Sobic010G053500 Sobic003G140100--Sobic007G049600 Sobic003G140100--Sobic001G428300 Sobic003G140100--Sobic005G164000 Sobic003G140100--Sobic002G360801 Sobic003G140100--Sobic005G226600 Sobic003G140100--Sobic008G016500 Sobic003G140100--Sobic004G223100 Sobic002G360801--Sobic007G049600 Sobic002G360801--Sobic010G053500 Sobic002G360801--Sobic002G157400 Sobic002G360801--Sobic003G140100 Sobic002G360801--Sobic001G428300 Sobic002G360801--Sobic005G226600 Sobic002G360801--Sobic008G016500 Sobic002G360801--Sobic004G223100 Sobic002G360801--Sobic003G384200 Sobic004G223100--Sobic005G226600 Sobic010G048000 Sobic010G048000 Sobic004G223100--Sobic010G048000 Sobic004G223100--Sobic002G157400 Sobic001G152400 Sobic001G152400 Sobic004G223100--Sobic001G152400 Sobic002G067500 Sobic002G067500 Sobic004G223100--Sobic002G067500 Sobic004G223100--Sobic003G140100 Sobic004G062100 Sobic004G062100 Sobic004G223100--Sobic004G062100 Sobic001G472400 Sobic001G472400 Sobic004G223100--Sobic001G472400 Sobic003G271700 Sobic003G271700 Sobic004G223100--Sobic003G271700 Sobic005G226600--Sobic010G048000 Sobic005G226600--Sobic003G271700 Sobic005G226600--Sobic001G472400 Sobic006G079500 Sobic006G079500 Sobic005G226600--Sobic006G079500 Sobic009G046000 Sobic009G046000 Sobic005G226600--Sobic009G046000 Sobic005G226500 Sobic005G226500 Sobic005G226600--Sobic005G226500 Sobic004G318800 Sobic004G318800 Sobic005G226600--Sobic004G318800 Sobic007G206000 Sobic007G206000 Sobic005G226600--Sobic007G206000 Sobic007G048500 Sobic007G048500 Sobic005G226600--Sobic007G048500
Octagon: transcription factors


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