Gene annotation
Transcriptome id Sobic.001G369200.1
Synonym
Functional annotation terpene synthase, putative, expressed
UniProt A0A1Z5S9J4
Pfam PF01397 PF03936
Panther DB PTHR31225 PTHR31225:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016829; lyase activity GO:0010333terpene synthase activity GO:0008152metabolic process GO:0000287magnesium ion binding


Orthologs (automatic annotation)
TAIR AT4G20230 : Terpenoid cyclases/Protein prenyltransferases superfamily protein
RAP-DB (Rice) LOC_Os07g11790.1 : terpene synthase, putative, expressed
MaizeGDB (Corn) Zm00025a002504
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G016500 rhamnogalacturonate lyase, putative, expressed K18195: RGL4, rhamnogalacturonan endolyase
2 Sobic.003G384200 beta-hexosaminidase precursor, putative, expressed K12373: hexosaminidase
3 Sobic.001G359000 expressed protein -
4 Sobic.001G428300 strictosidine synthase, putative, expressed -
5 Sobic.010G053500 expressed protein -
6 Sobic.003G140100 helix-loop-helix DNA-binding domain containing protein, expressed -
7 Sobic.010G030200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@homeobox associated leucine zipper, putative, expressed -
8 Sobic.002G157400 ankyrin, putative, expressed -
9 Sobic.004G017500 helix-loop-helix DNA-binding domain containing protein, expressed -
10 Sobic.009G168100 expressed protein -
11 Sobic.004G149500 expressed protein -
12 Sobic.002G158401 - -
13 Sobic.007G049600 expressed protein -
14 Sobic.002G360801 - -
15 Sobic.006G014632 - -
16 Sobic.003G177600 tetratricopeptide repeat containing protein, putative, expressed -
17 Sobic.005G164000 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
18 Sobic.006G082850 - -
19 Sobic.005G006500 - -
20 Sobic.008G163900 OsFBX358 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic001G369200 Sobic001G369200 Sobic008G016500 Sobic008G016500 Sobic001G369200--Sobic008G016500 Sobic003G384200 Sobic003G384200 Sobic001G369200--Sobic003G384200 Sobic001G359000 Sobic001G359000 Sobic001G369200--Sobic001G359000 Sobic001G428300 Sobic001G428300 Sobic001G369200--Sobic001G428300 Sobic010G053500 Sobic010G053500 Sobic001G369200--Sobic010G053500 Sobic003G140100 Sobic003G140100 Sobic001G369200--Sobic003G140100 Sobic010G030200 Sobic010G030200 Sobic001G369200--Sobic010G030200 Sobic002G157400 Sobic002G157400 Sobic001G369200--Sobic002G157400 Sobic004G017500 Sobic004G017500 Sobic001G369200--Sobic004G017500 Sobic008G016500--Sobic001G428300 Sobic008G016500--Sobic003G384200 Sobic008G016500--Sobic010G053500 Sobic008G016500--Sobic002G157400 Sobic008G016500--Sobic003G140100 Sobic007G049600 Sobic007G049600 Sobic008G016500--Sobic007G049600 Sobic002G360801 Sobic002G360801 Sobic008G016500--Sobic002G360801 Sobic008G016500--Sobic001G359000 Sobic005G164000 Sobic005G164000 Sobic008G016500--Sobic005G164000 Sobic003G384200--Sobic001G428300 Sobic003G384200--Sobic008G016500 Sobic003G384200--Sobic010G053500 Sobic003G384200--Sobic002G157400 Sobic003G384200--Sobic007G049600 Sobic003G384200--Sobic003G140100 Sobic003G384200--Sobic002G360801 Sobic004G149500 Sobic004G149500 Sobic003G384200--Sobic004G149500 Sobic002G158401 Sobic002G158401 Sobic003G384200--Sobic002G158401 Sobic001G359000--Sobic004G149500 Sobic001G359000--Sobic002G158401 Sobic004G158600 Sobic004G158600 Sobic001G359000--Sobic004G158600 Sobic009G168100 Sobic009G168100 Sobic001G359000--Sobic009G168100 Sobic006G014632 Sobic006G014632 Sobic001G359000--Sobic006G014632 Sobic010G090000 Sobic010G090000 Sobic001G359000--Sobic010G090000 Sobic003G177600 Sobic003G177600 Sobic001G359000--Sobic003G177600 Sobic008G163900 Sobic008G163900 Sobic001G359000--Sobic008G163900 Sobic003G102100 Sobic003G102100 Sobic001G359000--Sobic003G102100 Sobic001G428300--Sobic010G053500 Sobic001G428300--Sobic002G157400 Sobic001G428300--Sobic008G016500 Sobic001G428300--Sobic007G049600 Sobic001G428300--Sobic003G384200 Sobic001G428300--Sobic003G140100 Sobic001G428300--Sobic002G360801 Sobic004G223100 Sobic004G223100 Sobic001G428300--Sobic004G223100 Sobic005G226600 Sobic005G226600 Sobic001G428300--Sobic005G226600 Sobic010G053500--Sobic002G157400 Sobic010G053500--Sobic003G140100 Sobic010G053500--Sobic001G428300 Sobic010G053500--Sobic007G049600 Sobic010G053500--Sobic002G360801 Sobic010G053500--Sobic008G016500 Sobic010G053500--Sobic003G384200 Sobic010G053500--Sobic005G226600 Sobic010G053500--Sobic004G223100 Sobic003G140100--Sobic002G157400 Sobic003G140100--Sobic010G053500 Sobic003G140100--Sobic007G049600 Sobic003G140100--Sobic001G428300 Sobic003G140100--Sobic005G164000 Sobic003G140100--Sobic002G360801 Sobic003G140100--Sobic005G226600 Sobic003G140100--Sobic008G016500 Sobic003G140100--Sobic004G223100 Sobic001G435700 Sobic001G435700 Sobic010G030200--Sobic001G435700 Sobic010G030200--Sobic003G177600 Sobic002G172401 Sobic002G172401 Sobic010G030200--Sobic002G172401 Sobic002G420100 Sobic002G420100 Sobic010G030200--Sobic002G420100 Sobic010G253200 Sobic010G253200 Sobic010G030200--Sobic010G253200 Sobic010G030200--Sobic001G359000 Sobic010G030200--Sobic004G149500 Sobic010G030200--Sobic002G158401 Sobic008G171900 Sobic008G171900 Sobic010G030200--Sobic008G171900 Sobic002G157400--Sobic010G053500 Sobic002G157400--Sobic003G140100 Sobic002G157400--Sobic007G049600 Sobic002G157400--Sobic001G428300 Sobic002G157400--Sobic002G360801 Sobic002G157400--Sobic008G016500 Sobic002G157400--Sobic005G226600 Sobic002G157400--Sobic004G223100 Sobic002G157400--Sobic005G164000 Sobic004G017500--Sobic008G163900 Sobic002G007500 Sobic002G007500 Sobic004G017500--Sobic002G007500 Sobic009G180300 Sobic009G180300 Sobic004G017500--Sobic009G180300 Sobic004G017500--Sobic001G359000 Sobic006G067300 Sobic006G067300 Sobic004G017500--Sobic006G067300 Sobic004G017500--Sobic009G168100 Sobic004G218100 Sobic004G218100 Sobic004G017500--Sobic004G218100 Sobic006G015700 Sobic006G015700 Sobic004G017500--Sobic006G015700 Sobic008G140600 Sobic008G140600 Sobic004G017500--Sobic008G140600
Octagon: transcription factors


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