Gene annotation
Transcriptome id Sobic.010G030200.1
Synonym HB4, Sb10g002750, ATHB-4, ATHB4
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
homeobox associated leucine zipper, putative, expressed
UniProt C5Z3S7
Pfam PF02183 PF00046
Panther DB PTHR24326 PTHR24326:SF210
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT5G06710 : homeobox from Arabidopsis thaliana
RAP-DB (Rice) LOC_Os06g04870.1 : homeobox associated leucine zipper, putative, expressed
MaizeGDB (Corn) Zm00025a005382 , Zm00025a003364 , Zm00025a010325 , Zm00025a041464 , Zm00025a047209 , Zm00025a050084 , Zm00025a050086 , Zm00025a031666
Brachypodium KQJ90458 , PNT65887 , PNT76669 , KQJ98582 , KQJ97808 , KQJ93345
Barley HORVU7Hr1G018780.13 , HORVU7Hr1G018780.12 , HORVU7Hr1G018780.11 , HORVU7Hr1G018780.10 , HORVU7Hr1G018780.14 , HORVU5Hr1G067010.13 , HORVU5Hr1G067010.10 , HORVU5Hr1G067010.15 , HORVU5Hr1G067010.14 , HORVU1Hr1G055930.1 , HORVU1Hr1G055930.3 , HORVU1Hr1G055930.2 , HORVU1Hr1G055930.5 , HORVU1Hr1G055930.4 , HORVU1Hr1G055930.6 , HORVU2Hr1G097940.5 , HORVU2Hr1G097940.4 , HORVU2Hr1G097940.6 , HORVU2Hr1G097940.1 , HORVU2Hr1G097940.3 , HORVU2Hr1G097940.2 , HORVU2Hr1G097940.9 , HORVU2Hr1G097940.8 , HORVU5Hr1G067010.12 , HORVU5Hr1G067010.11 , HORVU5Hr1G067010.9 , HORVU5Hr1G067010.3 , HORVU5Hr1G067010.2 , HORVU5Hr1G067010.1 , HORVU5Hr1G067010.7 , HORVU5Hr1G067010.6 , HORVU5Hr1G067010.4 , HORVU7Hr1G018780.3 , HORVU7Hr1G018780.2 , HORVU7Hr1G018780.7 , HORVU7Hr1G018780.6 , HORVU7Hr1G018780.5 , HORVU7Hr1G018780.4 , HORVU7Hr1G018780.9 , HORVU7Hr1G018780.8 , HORVU2Hr1G097940.11 , HORVU2Hr1G097940.10
Wheat TraesCS7D02G078900 , TraesCS1B02G232700 , TraesCS7A02G083800 , TraesCS2B02G434900 , TraesCS4A02G382300 , TraesCS7D02G078800 , TraesCS4A02G382200 , TraesCS4A02G382400 , TraesCS7A02G084000 , TraesCS5D02G235300 , TraesCS2A02G415900 , TraesCS5A02G232700 , TraesCS1A02G219200 , TraesCS7A02G083900 , TraesCS7D02G079000 , TraesCS5B02G231300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G435700 HVA22, putative, expressed K17338: receptor expression-enhancing protein 1/2/3/4
2 Sobic.003G177600 tetratricopeptide repeat containing protein, putative, expressed -
3 Sobic.002G172401 - K07904: Ras-related protein Rab-11A
4 Sobic.002G420100 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
5 Sobic.010G253200 GHMP kinases ATP-binding protein, putative, expressed K12446: L-arabinokinase
6 Sobic.001G359000 expressed protein -
7 Sobic.004G149500 expressed protein -
8 Sobic.002G158401 - -
9 Sobic.008G171900 kinesin motor domain containing protein, putative, expressed K10406: kinesin family member C2/C3
10 Sobic.003G102100 expressed protein -
11 Sobic.003G423700 endonuclease, putative, expressed K08991: crossover junction endonuclease MUS81
12 Sobic.004G158600 expressed protein -
13 Sobic.004G241300 kinesin motor domain containing protein, putative, expressed K10395: kinesin family member 4
14 Sobic.008G156600 Leucine Rich Repeat family protein, expressed -
15 Sobic.006G196100 expressed protein -
16 Sobic.004G093100 protein kinase family protein, putative, expressed -
17 Sobic.009G163100 kinesin motor domain containing protein, putative, expressed K10403: kinesin family member 22
18 Sobic.008G140600 targeting protein for Xklp2 containing protein, expressed -
19 Sobic.002G186200 ASC1, putative, expressed K04710: CERS1_2_3_4, ceramide synthetase
20 Sobic.005G045800 serine/threonine-protein kinase WNK4, putative, expressed K08867: WNK, WNK lysine deficient protein kinase


Gene co-expression network
sample Sobic010G030200 Sobic010G030200 Sobic001G435700 Sobic001G435700 Sobic010G030200--Sobic001G435700 Sobic003G177600 Sobic003G177600 Sobic010G030200--Sobic003G177600 Sobic002G172401 Sobic002G172401 Sobic010G030200--Sobic002G172401 Sobic002G420100 Sobic002G420100 Sobic010G030200--Sobic002G420100 Sobic010G253200 Sobic010G253200 Sobic010G030200--Sobic010G253200 Sobic001G359000 Sobic001G359000 Sobic010G030200--Sobic001G359000 Sobic004G149500 Sobic004G149500 Sobic010G030200--Sobic004G149500 Sobic002G158401 Sobic002G158401 Sobic010G030200--Sobic002G158401 Sobic008G171900 Sobic008G171900 Sobic010G030200--Sobic008G171900 Sobic001G435700--Sobic008G171900 Sobic009G163100 Sobic009G163100 Sobic001G435700--Sobic009G163100 Sobic008G156600 Sobic008G156600 Sobic001G435700--Sobic008G156600 Sobic004G093100 Sobic004G093100 Sobic001G435700--Sobic004G093100 Sobic005G020600 Sobic005G020600 Sobic001G435700--Sobic005G020600 Sobic004G241300 Sobic004G241300 Sobic001G435700--Sobic004G241300 Sobic003G376900 Sobic003G376900 Sobic001G435700--Sobic003G376900 Sobic005G050400 Sobic005G050400 Sobic001G435700--Sobic005G050400 Sobic010G238300 Sobic010G238300 Sobic001G435700--Sobic010G238300 Sobic010G090000 Sobic010G090000 Sobic003G177600--Sobic010G090000 Sobic004G256100 Sobic004G256100 Sobic003G177600--Sobic004G256100 Sobic003G102100 Sobic003G102100 Sobic003G177600--Sobic003G102100 Sobic004G158600 Sobic004G158600 Sobic003G177600--Sobic004G158600 Sobic001G474100 Sobic001G474100 Sobic003G177600--Sobic001G474100 Sobic007G193600 Sobic007G193600 Sobic003G177600--Sobic007G193600 Sobic001G015000 Sobic001G015000 Sobic003G177600--Sobic001G015000 Sobic001G502100 Sobic001G502100 Sobic003G177600--Sobic001G502100 Sobic001G103600 Sobic001G103600 Sobic003G177600--Sobic001G103600 Sobic002G172401--Sobic005G020600 Sobic002G172401--Sobic008G156600 Sobic002G172401--Sobic005G050400 Sobic002G172401--Sobic009G163100 Sobic001G072000 Sobic001G072000 Sobic002G172401--Sobic001G072000 Sobic001G112600 Sobic001G112600 Sobic002G172401--Sobic001G112600 Sobic004G113600 Sobic004G113600 Sobic002G172401--Sobic004G113600 Sobic004G062200 Sobic004G062200 Sobic002G172401--Sobic004G062200 Sobic004G279200 Sobic004G279200 Sobic002G172401--Sobic004G279200 Sobic002G420100--Sobic010G253200 Sobic010G182000 Sobic010G182000 Sobic002G420100--Sobic010G182000 Sobic002G420100--Sobic004G241300 Sobic003G423700 Sobic003G423700 Sobic002G420100--Sobic003G423700 Sobic002G420100--Sobic008G156600 Sobic003G293400 Sobic003G293400 Sobic002G420100--Sobic003G293400 Sobic001G131900 Sobic001G131900 Sobic002G420100--Sobic001G131900 Sobic001G400000 Sobic001G400000 Sobic002G420100--Sobic001G400000 Sobic008G104000 Sobic008G104000 Sobic002G420100--Sobic008G104000 Sobic010G253200--Sobic002G420100 Sobic010G253200--Sobic004G241300 Sobic010G253200--Sobic003G423700 Sobic010G253200--Sobic008G104000 Sobic009G042000 Sobic009G042000 Sobic010G253200--Sobic009G042000 Sobic002G186200 Sobic002G186200 Sobic010G253200--Sobic002G186200 Sobic004G261800 Sobic004G261800 Sobic010G253200--Sobic004G261800 Sobic008G073500 Sobic008G073500 Sobic010G253200--Sobic008G073500 Sobic002G308000 Sobic002G308000 Sobic010G253200--Sobic002G308000 Sobic001G359000--Sobic004G149500 Sobic001G359000--Sobic002G158401 Sobic001G359000--Sobic004G158600 Sobic009G168100 Sobic009G168100 Sobic001G359000--Sobic009G168100 Sobic006G014632 Sobic006G014632 Sobic001G359000--Sobic006G014632 Sobic001G359000--Sobic010G090000 Sobic001G359000--Sobic003G177600 Sobic008G163900 Sobic008G163900 Sobic001G359000--Sobic008G163900 Sobic001G359000--Sobic003G102100 Sobic004G149500--Sobic002G158401 Sobic004G149500--Sobic010G238300 Sobic004G149500--Sobic004G093100 Sobic004G149500--Sobic001G359000 Sobic002G121450 Sobic002G121450 Sobic004G149500--Sobic002G121450 Sobic004G149500--Sobic004G158600 Sobic004G149500--Sobic001G435700 Sobic010G253600 Sobic010G253600 Sobic004G149500--Sobic010G253600 Sobic002G022700 Sobic002G022700 Sobic004G149500--Sobic002G022700 Sobic002G158401--Sobic004G149500 Sobic002G158401--Sobic010G238300 Sobic002G158401--Sobic004G093100 Sobic002G158401--Sobic001G359000 Sobic002G158401--Sobic002G121450 Sobic002G158401--Sobic004G158600 Sobic002G158401--Sobic001G435700 Sobic002G158401--Sobic010G253600 Sobic002G158401--Sobic002G022700 Sobic002G299500 Sobic002G299500 Sobic008G171900--Sobic002G299500 Sobic008G171900--Sobic009G163100 Sobic008G171900--Sobic004G241300 Sobic008G171900--Sobic001G435700 Sobic008G171900--Sobic008G156600 Sobic008G171900--Sobic005G020600 Sobic008G171900--Sobic003G376900 Sobic008G007600 Sobic008G007600 Sobic008G171900--Sobic008G007600 Sobic001G385300 Sobic001G385300 Sobic008G171900--Sobic001G385300
Octagon: transcription factors


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