Gene annotation
Transcriptome id Sobic.003G384200.1,Sobic.003G384200.2,Sobic.003G384200.3
Synonym ATHEX1, HEXO3
Functional annotation beta-hexosaminidase precursor, putative, expressed
UniProt A0A1B6Q7F9
Pfam PF14845 PF00728
Panther DB PTHR22600 PTHR22600:SF18
NCBI CDD -
KEGG Orthology K12373; hexosaminidase
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT1G65590 : beta-hexosaminidase 3
RAP-DB (Rice) LOC_Os01g66700.1 : beta-hexosaminidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a039465 , Zm00025a043710
Brachypodium KQK06245 , KQK06247 , KQK06246 , KQK06248 , KQK10983
Barley HORVU3Hr1G090160.18 , HORVU3Hr1G090160.17 , HORVU3Hr1G090160.16 , HORVU3Hr1G090160.15 , HORVU3Hr1G090160.14 , HORVU3Hr1G090160.13 , HORVU3Hr1G090160.12 , HORVU3Hr1G090160.10 , HORVU3Hr1G090160.7 , HORVU3Hr1G090160.6 , HORVU3Hr1G090160.5 , HORVU3Hr1G090160.4 , HORVU3Hr1G090160.9 , HORVU3Hr1G090160.8 , HORVU3Hr1G090160.23 , HORVU3Hr1G090160.20 , HORVU3Hr1G090160.21
Wheat TraesCS3B02G434500 , TraesCS3D02G396400 , TraesCS3A02G401600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G428300 strictosidine synthase, putative, expressed -
2 Sobic.008G016500 rhamnogalacturonate lyase, putative, expressed K18195: RGL4, rhamnogalacturonan endolyase
3 Sobic.010G053500 expressed protein -
4 Sobic.002G157400 ankyrin, putative, expressed -
5 Sobic.007G049600 expressed protein -
6 Sobic.003G140100 helix-loop-helix DNA-binding domain containing protein, expressed -
7 Sobic.002G360801 - -
8 Sobic.004G149500 expressed protein -
9 Sobic.002G158401 - -
10 Sobic.001G359000 expressed protein -
11 Sobic.006G082850 - -
12 Sobic.006G014632 - -
13 Sobic.008G106301 - -
14 Sobic.001G369200 terpene synthase, putative, expressed -
15 Sobic.002G022700 CSLC10 - cellulose synthase-like family C, expressed -
16 Sobic.010G030200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@homeobox associated leucine zipper, putative, expressed -
17 Sobic.005G164000 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
18 Sobic.004G223100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@response regulator receiver domain containing protein, expressed K14492: two-component response regulator ARR-A family
19 Sobic.009G168100 expressed protein -
20 Sobic.001G435700 HVA22, putative, expressed K17338: receptor expression-enhancing protein 1/2/3/4


Gene co-expression network
sample Sobic003G384200 Sobic003G384200 Sobic001G428300 Sobic001G428300 Sobic003G384200--Sobic001G428300 Sobic008G016500 Sobic008G016500 Sobic003G384200--Sobic008G016500 Sobic010G053500 Sobic010G053500 Sobic003G384200--Sobic010G053500 Sobic002G157400 Sobic002G157400 Sobic003G384200--Sobic002G157400 Sobic007G049600 Sobic007G049600 Sobic003G384200--Sobic007G049600 Sobic003G140100 Sobic003G140100 Sobic003G384200--Sobic003G140100 Sobic002G360801 Sobic002G360801 Sobic003G384200--Sobic002G360801 Sobic004G149500 Sobic004G149500 Sobic003G384200--Sobic004G149500 Sobic002G158401 Sobic002G158401 Sobic003G384200--Sobic002G158401 Sobic001G428300--Sobic010G053500 Sobic001G428300--Sobic002G157400 Sobic001G428300--Sobic008G016500 Sobic001G428300--Sobic007G049600 Sobic001G428300--Sobic003G384200 Sobic001G428300--Sobic003G140100 Sobic001G428300--Sobic002G360801 Sobic004G223100 Sobic004G223100 Sobic001G428300--Sobic004G223100 Sobic005G226600 Sobic005G226600 Sobic001G428300--Sobic005G226600 Sobic008G016500--Sobic001G428300 Sobic008G016500--Sobic003G384200 Sobic008G016500--Sobic010G053500 Sobic008G016500--Sobic002G157400 Sobic008G016500--Sobic003G140100 Sobic008G016500--Sobic007G049600 Sobic008G016500--Sobic002G360801 Sobic001G359000 Sobic001G359000 Sobic008G016500--Sobic001G359000 Sobic005G164000 Sobic005G164000 Sobic008G016500--Sobic005G164000 Sobic010G053500--Sobic002G157400 Sobic010G053500--Sobic003G140100 Sobic010G053500--Sobic001G428300 Sobic010G053500--Sobic007G049600 Sobic010G053500--Sobic002G360801 Sobic010G053500--Sobic008G016500 Sobic010G053500--Sobic003G384200 Sobic010G053500--Sobic005G226600 Sobic010G053500--Sobic004G223100 Sobic002G157400--Sobic010G053500 Sobic002G157400--Sobic003G140100 Sobic002G157400--Sobic007G049600 Sobic002G157400--Sobic001G428300 Sobic002G157400--Sobic002G360801 Sobic002G157400--Sobic008G016500 Sobic002G157400--Sobic005G226600 Sobic002G157400--Sobic004G223100 Sobic002G157400--Sobic005G164000 Sobic007G049600--Sobic002G157400 Sobic007G049600--Sobic010G053500 Sobic007G049600--Sobic001G428300 Sobic007G049600--Sobic003G140100 Sobic007G049600--Sobic002G360801 Sobic007G049600--Sobic005G226600 Sobic007G049600--Sobic008G016500 Sobic007G049600--Sobic004G223100 Sobic007G049600--Sobic003G384200 Sobic003G140100--Sobic002G157400 Sobic003G140100--Sobic010G053500 Sobic003G140100--Sobic007G049600 Sobic003G140100--Sobic001G428300 Sobic003G140100--Sobic005G164000 Sobic003G140100--Sobic002G360801 Sobic003G140100--Sobic005G226600 Sobic003G140100--Sobic008G016500 Sobic003G140100--Sobic004G223100 Sobic002G360801--Sobic007G049600 Sobic002G360801--Sobic010G053500 Sobic002G360801--Sobic002G157400 Sobic002G360801--Sobic003G140100 Sobic002G360801--Sobic001G428300 Sobic002G360801--Sobic005G226600 Sobic002G360801--Sobic008G016500 Sobic002G360801--Sobic004G223100 Sobic002G360801--Sobic003G384200 Sobic004G149500--Sobic002G158401 Sobic010G238300 Sobic010G238300 Sobic004G149500--Sobic010G238300 Sobic004G093100 Sobic004G093100 Sobic004G149500--Sobic004G093100 Sobic004G149500--Sobic001G359000 Sobic002G121450 Sobic002G121450 Sobic004G149500--Sobic002G121450 Sobic004G158600 Sobic004G158600 Sobic004G149500--Sobic004G158600 Sobic001G435700 Sobic001G435700 Sobic004G149500--Sobic001G435700 Sobic010G253600 Sobic010G253600 Sobic004G149500--Sobic010G253600 Sobic002G022700 Sobic002G022700 Sobic004G149500--Sobic002G022700 Sobic002G158401--Sobic004G149500 Sobic002G158401--Sobic010G238300 Sobic002G158401--Sobic004G093100 Sobic002G158401--Sobic001G359000 Sobic002G158401--Sobic002G121450 Sobic002G158401--Sobic004G158600 Sobic002G158401--Sobic001G435700 Sobic002G158401--Sobic010G253600 Sobic002G158401--Sobic002G022700
Octagon: transcription factors


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