Gene annotation
Transcriptome id Sobic.001G463800.5,Sobic.001G463800.3,Sobic.001G463800.4
Synonym Sb01g043520
Functional annotation expressed protein
UniProt C5WTR6
Pfam PF04484
Panther DB PTHR31807 PTHR31807:SF8 PTHR31807:SF8 PTHR31807
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G49890 : Family of unknown function (DUF566)
RAP-DB (Rice) LOC_Os03g10820.1 : expressed protein
MaizeGDB (Corn) Zm00025a053131 , Zm00025a001121 , Zm00025a015781
Brachypodium KQK23023 , PNT77943 , PNT77942
Barley -
Wheat TraesCS4A02G048700 , TraesCS4B02G256100 , TraesCS4D02G256200 , TraesCS4D02G256200
Populus -


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cDNA sequences
Sobic.001G463800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G370400 expressed protein -
2 Sobic.001G285200 protein transport protein-related, putative, expressed -
3 Sobic.005G055600 myosin heavy chain-related, putative, expressed -
4 Sobic.004G308100 uncharacterized Cys-rich domain containing protein, putative, expressed -
5 Sobic.001G487200 zinc finger, C3HC4 type domain containing protein, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
6 Sobic.009G212100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
7 Sobic.001G201000 protein transport protein-related, putative, expressed -
8 Sobic.006G267500 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
9 Sobic.008G096200 AGC_PVPK_like_kin82y.19 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
10 Sobic.002G276600 endoglucanase, putative, expressed -
11 Sobic.010G211800 TKL_IRAK_CrRLK1L-1.14 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
12 Sobic.001G231200 expressed protein -
13 Sobic.001G437500 plant protein of unknown function DUF869 domain containing protein, expressed -
14 Sobic.006G083700 expressed protein -
15 Sobic.003G420300 zinc finger protein, putative, expressed -
16 Sobic.001G113800 receptor protein kinase TMK1 precursor, putative, expressed -
17 Sobic.007G084200 expressed protein -
18 Sobic.003G135400 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
19 Sobic.001G023500 expressed protein -
20 Sobic.004G328300 expressed protein -


Gene co-expression network
sample Sobic001G463800 Sobic001G463800 Sobic002G370400 Sobic002G370400 Sobic001G463800--Sobic002G370400 Sobic001G285200 Sobic001G285200 Sobic001G463800--Sobic001G285200 Sobic005G055600 Sobic005G055600 Sobic001G463800--Sobic005G055600 Sobic004G308100 Sobic004G308100 Sobic001G463800--Sobic004G308100 Sobic001G487200 Sobic001G487200 Sobic001G463800--Sobic001G487200 Sobic009G212100 Sobic009G212100 Sobic001G463800--Sobic009G212100 Sobic001G201000 Sobic001G201000 Sobic001G463800--Sobic001G201000 Sobic006G267500 Sobic006G267500 Sobic001G463800--Sobic006G267500 Sobic008G096200 Sobic008G096200 Sobic001G463800--Sobic008G096200 Sobic002G370400--Sobic001G487200 Sobic001G231200 Sobic001G231200 Sobic002G370400--Sobic001G231200 Sobic004G315700 Sobic004G315700 Sobic002G370400--Sobic004G315700 Sobic006G272500 Sobic006G272500 Sobic002G370400--Sobic006G272500 Sobic002G370400--Sobic009G212100 Sobic001G296800 Sobic001G296800 Sobic002G370400--Sobic001G296800 Sobic009G124800 Sobic009G124800 Sobic002G370400--Sobic009G124800 Sobic003G153900 Sobic003G153900 Sobic002G370400--Sobic003G153900 Sobic010G211800 Sobic010G211800 Sobic002G370400--Sobic010G211800 Sobic002G419200 Sobic002G419200 Sobic001G285200--Sobic002G419200 Sobic001G285200--Sobic001G201000 Sobic001G285200--Sobic006G272500 Sobic001G285200--Sobic005G055600 Sobic003G277200 Sobic003G277200 Sobic001G285200--Sobic003G277200 Sobic008G192700 Sobic008G192700 Sobic001G285200--Sobic008G192700 Sobic003G338200 Sobic003G338200 Sobic001G285200--Sobic003G338200 Sobic001G285200--Sobic010G211800 Sobic009G175100 Sobic009G175100 Sobic001G285200--Sobic009G175100 Sobic004G328300 Sobic004G328300 Sobic005G055600--Sobic004G328300 Sobic005G055600--Sobic001G201000 Sobic005G055600--Sobic001G285200 Sobic002G074000 Sobic002G074000 Sobic005G055600--Sobic002G074000 Sobic001G416000 Sobic001G416000 Sobic005G055600--Sobic001G416000 Sobic009G202801 Sobic009G202801 Sobic005G055600--Sobic009G202801 Sobic005G055600--Sobic009G175100 Sobic007G087800 Sobic007G087800 Sobic005G055600--Sobic007G087800 Sobic001G023500 Sobic001G023500 Sobic005G055600--Sobic001G023500 Sobic004G287800 Sobic004G287800 Sobic004G308100--Sobic004G287800 Sobic003G013000 Sobic003G013000 Sobic004G308100--Sobic003G013000 Sobic004G308100--Sobic001G487200 Sobic004G308100--Sobic002G370400 Sobic002G161700 Sobic002G161700 Sobic004G308100--Sobic002G161700 Sobic006G254500 Sobic006G254500 Sobic004G308100--Sobic006G254500 Sobic004G333600 Sobic004G333600 Sobic004G308100--Sobic004G333600 Sobic004G308100--Sobic006G272500 Sobic007G166800 Sobic007G166800 Sobic004G308100--Sobic007G166800 Sobic001G487200--Sobic004G315700 Sobic001G487200--Sobic009G212100 Sobic001G369800 Sobic001G369800 Sobic001G487200--Sobic001G369800 Sobic001G487200--Sobic001G231200 Sobic001G487200--Sobic002G370400 Sobic003G226700 Sobic003G226700 Sobic001G487200--Sobic003G226700 Sobic001G540700 Sobic001G540700 Sobic001G487200--Sobic001G540700 Sobic001G487200--Sobic001G296800 Sobic007G084200 Sobic007G084200 Sobic001G487200--Sobic007G084200 Sobic009G212100--Sobic001G487200 Sobic009G212100--Sobic004G315700 Sobic009G212100--Sobic001G296800 Sobic009G212100--Sobic003G226700 Sobic009G212100--Sobic007G084200 Sobic009G212100--Sobic006G267500 Sobic006G084300 Sobic006G084300 Sobic009G212100--Sobic006G084300 Sobic009G212100--Sobic001G369800 Sobic009G212100--Sobic006G254500 Sobic001G201000--Sobic001G285200 Sobic001G201000--Sobic005G055600 Sobic002G320600 Sobic002G320600 Sobic001G201000--Sobic002G320600 Sobic003G031700 Sobic003G031700 Sobic001G201000--Sobic003G031700 Sobic001G201000--Sobic001G023500 Sobic007G116800 Sobic007G116800 Sobic001G201000--Sobic007G116800 Sobic001G201000--Sobic010G211800 Sobic001G201000--Sobic007G087800 Sobic001G207600 Sobic001G207600 Sobic001G201000--Sobic001G207600 Sobic009G061000 Sobic009G061000 Sobic006G267500--Sobic009G061000 Sobic009G206500 Sobic009G206500 Sobic006G267500--Sobic009G206500 Sobic006G267500--Sobic009G212100 Sobic006G267500--Sobic006G254500 Sobic001G437500 Sobic001G437500 Sobic006G267500--Sobic001G437500 Sobic006G267500--Sobic004G315700 Sobic010G090500 Sobic010G090500 Sobic006G267500--Sobic010G090500 Sobic005G204700 Sobic005G204700 Sobic006G267500--Sobic005G204700 Sobic006G267500--Sobic001G296800 Sobic008G096200--Sobic001G231200 Sobic010G105400 Sobic010G105400 Sobic008G096200--Sobic010G105400 Sobic008G096200--Sobic010G211800 Sobic002G394500 Sobic002G394500 Sobic008G096200--Sobic002G394500 Sobic008G096200--Sobic001G487200 Sobic005G144600 Sobic005G144600 Sobic008G096200--Sobic005G144600 Sobic003G420300 Sobic003G420300 Sobic008G096200--Sobic003G420300 Sobic002G426800 Sobic002G426800 Sobic008G096200--Sobic002G426800 Sobic001G261549 Sobic001G261549 Sobic008G096200--Sobic001G261549
Octagon: transcription factors


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