Gene annotation
Transcriptome id Sobic.001G523000.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6QQT5
Pfam PF16594
Panther DB PTHR35165 PTHR35165:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g03520.1 : expressed protein
MaizeGDB (Corn) Zm00025a000357 , Zm00025a010120
Brachypodium PNT61699
Barley HORVU4Hr1G083070.1
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.001G523000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G185200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CorA-like magnesium transporter protein, putative, expressed -
2 Sobic.002G165140 - K18693: DPP1, DPPL, diacylglycerol diphosphate phosphatase / phosphatidate phosphatase
3 Sobic.003G365000 cytochrome P450, putative, expressed -
4 Sobic.005G217200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
5 Sobic.007G063300 reductase, putative, expressed -
6 Sobic.002G035200 transporter family protein, putative, expressed K08150: SLC2A13, MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13
7 Sobic.008G159250 - -
8 Sobic.002G241400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.003G116900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
10 Sobic.003G265100 lipid phosphatase protein, putative, expressed -
11 Sobic.007G001100 DTA2, putative, expressed -
12 Sobic.003G363100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sialyltransferase family domain containing protein, expressed -
13 Sobic.003G388251 - K01166: ribonuclease T2
14 Sobic.010G001500 AML1, putative, expressed -
15 Sobic.008G012400 2-isopropylmalate synthase B, putative, expressed K01649: leuA, 2-isopropylmalate synthase
16 Sobic.001G469500 transporter family protein, putative, expressed -
17 Sobic.010G192800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.004G116000 expressed protein -
19 Sobic.004G124200 3-hydroxyacyl-CoA dehydrogenase, putative, expressed K10527: enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
20 Sobic.004G071200 limonoid UDP-glucosyltransferase, putative, expressed -


Gene co-expression network
sample Sobic001G523000 Sobic001G523000 Sobic007G185200 Sobic007G185200 Sobic001G523000--Sobic007G185200 Sobic002G165140 Sobic002G165140 Sobic001G523000--Sobic002G165140 Sobic003G365000 Sobic003G365000 Sobic001G523000--Sobic003G365000 Sobic005G217200 Sobic005G217200 Sobic001G523000--Sobic005G217200 Sobic007G063300 Sobic007G063300 Sobic001G523000--Sobic007G063300 Sobic002G035200 Sobic002G035200 Sobic001G523000--Sobic002G035200 Sobic008G159250 Sobic008G159250 Sobic001G523000--Sobic008G159250 Sobic002G241400 Sobic002G241400 Sobic001G523000--Sobic002G241400 Sobic003G116900 Sobic003G116900 Sobic001G523000--Sobic003G116900 Sobic009G016600 Sobic009G016600 Sobic007G185200--Sobic009G016600 Sobic005G024200 Sobic005G024200 Sobic007G185200--Sobic005G024200 Sobic010G192800 Sobic010G192800 Sobic007G185200--Sobic010G192800 Sobic003G363100 Sobic003G363100 Sobic007G185200--Sobic003G363100 Sobic001G016700 Sobic001G016700 Sobic007G185200--Sobic001G016700 Sobic003G404200 Sobic003G404200 Sobic007G185200--Sobic003G404200 Sobic007G185200--Sobic002G035200 Sobic007G185200--Sobic001G523000 Sobic003G322700 Sobic003G322700 Sobic007G185200--Sobic003G322700 Sobic002G165140--Sobic007G063300 Sobic004G266400 Sobic004G266400 Sobic002G165140--Sobic004G266400 Sobic002G165140--Sobic001G016700 Sobic002G165140--Sobic009G016600 Sobic002G165140--Sobic008G159250 Sobic006G204900 Sobic006G204900 Sobic002G165140--Sobic006G204900 Sobic003G109100 Sobic003G109100 Sobic002G165140--Sobic003G109100 Sobic004G329400 Sobic004G329400 Sobic002G165140--Sobic004G329400 Sobic010G001500 Sobic010G001500 Sobic002G165140--Sobic010G001500 Sobic009G034700 Sobic009G034700 Sobic003G365000--Sobic009G034700 Sobic004G124200 Sobic004G124200 Sobic003G365000--Sobic004G124200 Sobic003G388251 Sobic003G388251 Sobic003G365000--Sobic003G388251 Sobic003G365000--Sobic003G116900 Sobic003G365000--Sobic010G192800 Sobic005G178100 Sobic005G178100 Sobic003G365000--Sobic005G178100 Sobic001G130000 Sobic001G130000 Sobic003G365000--Sobic001G130000 Sobic003G365000--Sobic003G404200 Sobic001G320200 Sobic001G320200 Sobic003G365000--Sobic001G320200 Sobic008G189200 Sobic008G189200 Sobic005G217200--Sobic008G189200 Sobic010G210200 Sobic010G210200 Sobic005G217200--Sobic010G210200 Sobic005G217200--Sobic003G363100 Sobic009G126900 Sobic009G126900 Sobic005G217200--Sobic009G126900 Sobic004G237600 Sobic004G237600 Sobic005G217200--Sobic004G237600 Sobic003G276000 Sobic003G276000 Sobic005G217200--Sobic003G276000 Sobic003G244600 Sobic003G244600 Sobic005G217200--Sobic003G244600 Sobic010G162900 Sobic010G162900 Sobic005G217200--Sobic010G162900 Sobic002G172900 Sobic002G172900 Sobic005G217200--Sobic002G172900 Sobic007G063300--Sobic002G165140 Sobic007G063300--Sobic010G192800 Sobic007G063300--Sobic009G016600 Sobic007G063300--Sobic001G016700 Sobic006G143000 Sobic006G143000 Sobic007G063300--Sobic006G143000 Sobic004G059300 Sobic004G059300 Sobic007G063300--Sobic004G059300 Sobic002G249300 Sobic002G249300 Sobic007G063300--Sobic002G249300 Sobic007G084300 Sobic007G084300 Sobic007G063300--Sobic007G084300 Sobic007G063300--Sobic003G404200 Sobic002G035200--Sobic005G217200 Sobic002G035200--Sobic003G363100 Sobic001G469500 Sobic001G469500 Sobic002G035200--Sobic001G469500 Sobic006G076800 Sobic006G076800 Sobic002G035200--Sobic006G076800 Sobic002G035200--Sobic005G024200 Sobic002G373100 Sobic002G373100 Sobic002G035200--Sobic002G373100 Sobic002G035200--Sobic007G185200 Sobic007G001100 Sobic007G001100 Sobic002G035200--Sobic007G001100 Sobic008G079300 Sobic008G079300 Sobic002G035200--Sobic008G079300 Sobic008G159250--Sobic002G165140 Sobic008G012400 Sobic008G012400 Sobic008G159250--Sobic008G012400 Sobic001G535800 Sobic001G535800 Sobic008G159250--Sobic001G535800 Sobic008G159250--Sobic004G266400 Sobic003G200100 Sobic003G200100 Sobic008G159250--Sobic003G200100 Sobic010G224000 Sobic010G224000 Sobic008G159250--Sobic010G224000 Sobic004G331100 Sobic004G331100 Sobic008G159250--Sobic004G331100 Sobic007G172400 Sobic007G172400 Sobic008G159250--Sobic007G172400 Sobic001G436900 Sobic001G436900 Sobic008G159250--Sobic001G436900 Sobic008G094700 Sobic008G094700 Sobic002G241400--Sobic008G094700 Sobic002G130700 Sobic002G130700 Sobic002G241400--Sobic002G130700 Sobic002G241400--Sobic005G217200 Sobic004G067200 Sobic004G067200 Sobic002G241400--Sobic004G067200 Sobic008G074700 Sobic008G074700 Sobic002G241400--Sobic008G074700 Sobic001G236200 Sobic001G236200 Sobic002G241400--Sobic001G236200 Sobic001G385800 Sobic001G385800 Sobic002G241400--Sobic001G385800 Sobic001G180900 Sobic001G180900 Sobic002G241400--Sobic001G180900 Sobic005G091600 Sobic005G091600 Sobic002G241400--Sobic005G091600 Sobic003G436300 Sobic003G436300 Sobic003G116900--Sobic003G436300 Sobic001G270400 Sobic001G270400 Sobic003G116900--Sobic001G270400 Sobic004G337200 Sobic004G337200 Sobic003G116900--Sobic004G337200 Sobic003G116900--Sobic008G074700 Sobic006G034000 Sobic006G034000 Sobic003G116900--Sobic006G034000 Sobic002G105200 Sobic002G105200 Sobic003G116900--Sobic002G105200 Sobic010G020300 Sobic010G020300 Sobic003G116900--Sobic010G020300 Sobic003G116900--Sobic003G365000 Sobic007G024700 Sobic007G024700 Sobic003G116900--Sobic007G024700
Octagon: transcription factors


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