Gene annotation
Transcriptome id Sobic.008G159250.1
Synonym -
Functional annotation -
UniProt A0A1Z5R6Z6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G165140 - K18693: DPP1, DPPL, diacylglycerol diphosphate phosphatase / phosphatidate phosphatase
2 Sobic.008G012400 2-isopropylmalate synthase B, putative, expressed K01649: leuA, 2-isopropylmalate synthase
3 Sobic.001G535800 DNA methyltransferase protein, putative, expressed -
4 Sobic.004G266400 monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)
5 Sobic.003G200100 DUF630/DUF632 domains containing protein, putative, expressed -
6 Sobic.010G224000 molybdenum cofactor sulfurase, putative, expressed K15631: molybdenum cofactor sulfurtransferase
7 Sobic.004G331100 WD domain and HEAT domain containing protein, putative, expressed K08333: PIK3R4, phosphoinositide-3-kinase, regulatory subunit 4
8 Sobic.007G172400 AAA-type ATPase family protein, putative, expressed K13338: peroxin-1
9 Sobic.001G436900 autophagy protein 9, putative, expressed K17907: autophagy-related protein 9
10 Sobic.002G382600 expressed protein -
11 Sobic.009G113000 chaperone protein dnaJ 49, putative, expressed K09518: DnaJ homolog subfamily B member 12
12 Sobic.010G001500 AML1, putative, expressed -
13 Sobic.003G100800 acetyl-CoA acetyltransferase, cytosolic, putative, expressed K00626: ACAT, acetyl-CoA C-acetyltransferase
14 Sobic.006G204900 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
15 Sobic.006G043600 cysteine proteinase 1 precursor, putative, expressed K01373: cathepsin F
16 Sobic.004G347400 pumilio-family RNA binding protein, putative, expressed K17943: pumilio RNA-binding family
17 Sobic.001G454500 potyvirus VPg interacting protein, putative, expressed -
18 Sobic.002G058500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FAD-linked oxidoreductase protein, putative, expressed K18204: D-2-hydroxyglutarate dehydrogenase
19 Sobic.009G026500 ATSIZ1/SIZ1, putative, expressed -
20 Sobic.001G146800 expressed protein -


Gene co-expression network
sample Sobic008G159250 Sobic008G159250 Sobic002G165140 Sobic002G165140 Sobic008G159250--Sobic002G165140 Sobic008G012400 Sobic008G012400 Sobic008G159250--Sobic008G012400 Sobic001G535800 Sobic001G535800 Sobic008G159250--Sobic001G535800 Sobic004G266400 Sobic004G266400 Sobic008G159250--Sobic004G266400 Sobic003G200100 Sobic003G200100 Sobic008G159250--Sobic003G200100 Sobic010G224000 Sobic010G224000 Sobic008G159250--Sobic010G224000 Sobic004G331100 Sobic004G331100 Sobic008G159250--Sobic004G331100 Sobic007G172400 Sobic007G172400 Sobic008G159250--Sobic007G172400 Sobic001G436900 Sobic001G436900 Sobic008G159250--Sobic001G436900 Sobic007G063300 Sobic007G063300 Sobic002G165140--Sobic007G063300 Sobic002G165140--Sobic004G266400 Sobic001G016700 Sobic001G016700 Sobic002G165140--Sobic001G016700 Sobic009G016600 Sobic009G016600 Sobic002G165140--Sobic009G016600 Sobic002G165140--Sobic008G159250 Sobic006G204900 Sobic006G204900 Sobic002G165140--Sobic006G204900 Sobic003G109100 Sobic003G109100 Sobic002G165140--Sobic003G109100 Sobic004G329400 Sobic004G329400 Sobic002G165140--Sobic004G329400 Sobic010G001500 Sobic010G001500 Sobic002G165140--Sobic010G001500 Sobic008G012400--Sobic008G159250 Sobic002G058500 Sobic002G058500 Sobic008G012400--Sobic002G058500 Sobic001G321000 Sobic001G321000 Sobic008G012400--Sobic001G321000 Sobic008G012400--Sobic002G165140 Sobic003G100800 Sobic003G100800 Sobic008G012400--Sobic003G100800 Sobic010G205500 Sobic010G205500 Sobic008G012400--Sobic010G205500 Sobic008G012400--Sobic003G200100 Sobic006G226400 Sobic006G226400 Sobic008G012400--Sobic006G226400 Sobic003G388251 Sobic003G388251 Sobic008G012400--Sobic003G388251 Sobic001G535800--Sobic007G172400 Sobic003G408500 Sobic003G408500 Sobic001G535800--Sobic003G408500 Sobic001G498600 Sobic001G498600 Sobic001G535800--Sobic001G498600 Sobic009G083900 Sobic009G083900 Sobic001G535800--Sobic009G083900 Sobic004G216500 Sobic004G216500 Sobic001G535800--Sobic004G216500 Sobic001G535800--Sobic003G100800 Sobic006G245400 Sobic006G245400 Sobic001G535800--Sobic006G245400 Sobic001G088100 Sobic001G088100 Sobic001G535800--Sobic001G088100 Sobic010G153700 Sobic010G153700 Sobic001G535800--Sobic010G153700 Sobic006G043600 Sobic006G043600 Sobic004G266400--Sobic006G043600 Sobic004G266400--Sobic006G204900 Sobic002G159700 Sobic002G159700 Sobic004G266400--Sobic002G159700 Sobic004G266400--Sobic001G016700 Sobic004G266400--Sobic010G224000 Sobic003G322700 Sobic003G322700 Sobic004G266400--Sobic003G322700 Sobic001G462500 Sobic001G462500 Sobic004G266400--Sobic001G462500 Sobic001G121200 Sobic001G121200 Sobic004G266400--Sobic001G121200 Sobic001G207400 Sobic001G207400 Sobic004G266400--Sobic001G207400 Sobic004G065000 Sobic004G065000 Sobic003G200100--Sobic004G065000 Sobic003G200100--Sobic010G001500 Sobic004G265800 Sobic004G265800 Sobic003G200100--Sobic004G265800 Sobic009G133500 Sobic009G133500 Sobic003G200100--Sobic009G133500 Sobic001G111150 Sobic001G111150 Sobic003G200100--Sobic001G111150 Sobic010G130200 Sobic010G130200 Sobic003G200100--Sobic010G130200 Sobic003G200100--Sobic006G204900 Sobic002G415900 Sobic002G415900 Sobic003G200100--Sobic002G415900 Sobic003G200100--Sobic001G436900 Sobic010G112000 Sobic010G112000 Sobic010G224000--Sobic010G112000 Sobic009G113000 Sobic009G113000 Sobic010G224000--Sobic009G113000 Sobic001G248300 Sobic001G248300 Sobic010G224000--Sobic001G248300 Sobic009G053900 Sobic009G053900 Sobic010G224000--Sobic009G053900 Sobic010G224000--Sobic010G001500 Sobic007G075400 Sobic007G075400 Sobic010G224000--Sobic007G075400 Sobic010G224000--Sobic010G153700 Sobic010G224000--Sobic001G121200 Sobic004G347400 Sobic004G347400 Sobic010G224000--Sobic004G347400 Sobic004G331100--Sobic007G075400 Sobic009G027300 Sobic009G027300 Sobic004G331100--Sobic009G027300 Sobic002G419800 Sobic002G419800 Sobic004G331100--Sobic002G419800 Sobic003G101400 Sobic003G101400 Sobic004G331100--Sobic003G101400 Sobic001G290100 Sobic001G290100 Sobic004G331100--Sobic001G290100 Sobic001G050200 Sobic001G050200 Sobic004G331100--Sobic001G050200 Sobic004G331100--Sobic004G347400 Sobic003G118200 Sobic003G118200 Sobic004G331100--Sobic003G118200 Sobic004G331100--Sobic004G065000 Sobic001G058700 Sobic001G058700 Sobic007G172400--Sobic001G058700 Sobic002G071500 Sobic002G071500 Sobic007G172400--Sobic002G071500 Sobic001G050600 Sobic001G050600 Sobic007G172400--Sobic001G050600 Sobic007G172400--Sobic004G347400 Sobic007G172400--Sobic002G419800 Sobic001G219900 Sobic001G219900 Sobic007G172400--Sobic001G219900 Sobic004G113400 Sobic004G113400 Sobic007G172400--Sobic004G113400 Sobic001G474600 Sobic001G474600 Sobic007G172400--Sobic001G474600 Sobic003G408600 Sobic003G408600 Sobic007G172400--Sobic003G408600 Sobic001G436900--Sobic004G331100 Sobic003G320700 Sobic003G320700 Sobic001G436900--Sobic003G320700 Sobic001G436900--Sobic004G065000 Sobic006G271200 Sobic006G271200 Sobic001G436900--Sobic006G271200 Sobic001G436900--Sobic006G204900 Sobic001G436900--Sobic007G075400 Sobic001G436900--Sobic009G113000 Sobic002G382600 Sobic002G382600 Sobic001G436900--Sobic002G382600 Sobic010G264200 Sobic010G264200 Sobic001G436900--Sobic010G264200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.