Gene annotation
Transcriptome id Sobic.001G528900.3,Sobic.001G528900.1,Sobic.001G528900.2
Synonym Sb01g049210
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5X0X8 , A0A1Z5SC27 , A0A1Z5SBW2
Pfam -
Panther DB PTHR38360 PTHR38360:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G65900 : -
RAP-DB (Rice) LOC_Os03g02820.1 : expressed protein
MaizeGDB (Corn) Zm00025a000280
Brachypodium PNT78311 , PNT78313 , PNT78312 , PNT78314
Barley HORVU4Hr1G085310.19 , HORVU4Hr1G085310.18 , HORVU4Hr1G085310.15 , HORVU4Hr1G085310.14 , HORVU4Hr1G085310.17 , HORVU4Hr1G085310.16 , HORVU4Hr1G085310.11 , HORVU4Hr1G085310.10 , HORVU4Hr1G085310.13 , HORVU4Hr1G085310.12 , HORVU4Hr1G085310.9 , HORVU4Hr1G085310.8 , HORVU4Hr1G085310.1 , HORVU4Hr1G085310.3 , HORVU4Hr1G085310.2 , HORVU4Hr1G085310.5 , HORVU4Hr1G085310.4 , HORVU4Hr1G085310.7 , HORVU4Hr1G085310.6 , HORVU4Hr1G085310.28 , HORVU4Hr1G085310.29 , HORVU4Hr1G085310.20 , HORVU4Hr1G085310.21 , HORVU4Hr1G085310.22 , HORVU4Hr1G085310.23 , HORVU4Hr1G085310.24 , HORVU4Hr1G085310.25 , HORVU4Hr1G085310.26 , HORVU4Hr1G085310.27
Wheat TraesCS4D02G345200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G137401 - -
2 Sobic.006G257400 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
3 Sobic.003G334400 verticillium wilt disease resistance protein precursor, putative, expressed -
4 Sobic.001G190900 ABCG protein(PubMedID : 21265893)@"Orthologous gene of wheat Lr34 gene, expressed in accession AusTRCF 302546, but not expreesed in BTx623 possibly due to transposon insertions in intron 4"(PubMedID : 23117720)@pleiotropic drug resistance protein 15, putative, expressed -
5 Sobic.004G084600 similar to Putative uncharacterized protein(PubMedID : 29862293)@AP2 domain containing protein, expressed -
6 Sobic.009G146500 beta-galactosidase, putative, expressed -
7 Sobic.006G072701 - -
8 Sobic.002G171901 - -
9 Sobic.001G191500 expressed protein -
10 Sobic.003G096950 - -
11 Sobic.001G001800 expressed protein -
12 Sobic.008G083100 expressed protein -
13 Sobic.001G517900 protein kinase family protein, putative, expressed -
14 Sobic.001G229850 - -
15 Sobic.003G429600 - -
16 Sobic.003G058300 expressed protein -
17 Sobic.001G523932 - -
18 Sobic.004G203633 - -
19 Sobic.008G113200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
20 Sobic.009G026700 expressed protein -


Gene co-expression network
sample Sobic001G528900 Sobic001G528900 Sobic009G137401 Sobic009G137401 Sobic001G528900--Sobic009G137401 Sobic006G257400 Sobic006G257400 Sobic001G528900--Sobic006G257400 Sobic003G334400 Sobic003G334400 Sobic001G528900--Sobic003G334400 Sobic001G190900 Sobic001G190900 Sobic001G528900--Sobic001G190900 Sobic004G084600 Sobic004G084600 Sobic001G528900--Sobic004G084600 Sobic009G146500 Sobic009G146500 Sobic001G528900--Sobic009G146500 Sobic006G072701 Sobic006G072701 Sobic001G528900--Sobic006G072701 Sobic002G171901 Sobic002G171901 Sobic001G528900--Sobic002G171901 Sobic001G191500 Sobic001G191500 Sobic001G528900--Sobic001G191500 Sobic009G137401--Sobic001G191500 Sobic009G137401--Sobic001G190900 Sobic003G053750 Sobic003G053750 Sobic009G137401--Sobic003G053750 Sobic004G030850 Sobic004G030850 Sobic009G137401--Sobic004G030850 Sobic003G429600 Sobic003G429600 Sobic009G137401--Sobic003G429600 Sobic008G113200 Sobic008G113200 Sobic009G137401--Sobic008G113200 Sobic009G137401--Sobic001G528900 Sobic008G083100 Sobic008G083100 Sobic009G137401--Sobic008G083100 Sobic009G137401--Sobic006G072701 Sobic006G257400--Sobic001G528900 Sobic006G257400--Sobic009G137401 Sobic001G073550 Sobic001G073550 Sobic006G257400--Sobic001G073550 Sobic007G155950 Sobic007G155950 Sobic006G257400--Sobic007G155950 Sobic006G257400--Sobic002G171901 Sobic006G257400--Sobic003G334400 Sobic004G167600 Sobic004G167600 Sobic006G257400--Sobic004G167600 Sobic001G229850 Sobic001G229850 Sobic006G257400--Sobic001G229850 Sobic003G058300 Sobic003G058300 Sobic006G257400--Sobic003G058300 Sobic003G334400--Sobic002G171901 Sobic009G192400 Sobic009G192400 Sobic003G334400--Sobic009G192400 Sobic003G335000 Sobic003G335000 Sobic003G334400--Sobic003G335000 Sobic008G085800 Sobic008G085800 Sobic003G334400--Sobic008G085800 Sobic007G182300 Sobic007G182300 Sobic003G334400--Sobic007G182300 Sobic010G264150 Sobic010G264150 Sobic003G334400--Sobic010G264150 Sobic003G334400--Sobic004G084600 Sobic003G334400--Sobic006G072701 Sobic010G163666 Sobic010G163666 Sobic003G334400--Sobic010G163666 Sobic003G312900 Sobic003G312900 Sobic001G190900--Sobic003G312900 Sobic001G190900--Sobic009G137401 Sobic001G190900--Sobic001G191500 Sobic003G312800 Sobic003G312800 Sobic001G190900--Sobic003G312800 Sobic009G094200 Sobic009G094200 Sobic001G190900--Sobic009G094200 Sobic003G312600 Sobic003G312600 Sobic001G190900--Sobic003G312600 Sobic001G190900--Sobic006G072701 Sobic001G476600 Sobic001G476600 Sobic001G190900--Sobic001G476600 Sobic008G142200 Sobic008G142200 Sobic001G190900--Sobic008G142200 Sobic004G084600--Sobic002G171901 Sobic004G084600--Sobic006G072701 Sobic004G084600--Sobic004G030850 Sobic006G041200 Sobic006G041200 Sobic004G084600--Sobic006G041200 Sobic006G111000 Sobic006G111000 Sobic004G084600--Sobic006G111000 Sobic003G336550 Sobic003G336550 Sobic004G084600--Sobic003G336550 Sobic007G203800 Sobic007G203800 Sobic004G084600--Sobic007G203800 Sobic010G088100 Sobic010G088100 Sobic004G084600--Sobic010G088100 Sobic004G117850 Sobic004G117850 Sobic004G084600--Sobic004G117850 Sobic003G096950 Sobic003G096950 Sobic009G146500--Sobic003G096950 Sobic009G146500--Sobic001G190900 Sobic009G146500--Sobic006G072701 Sobic009G146500--Sobic008G083100 Sobic009G146500--Sobic001G191500 Sobic009G146500--Sobic007G182300 Sobic009G146500--Sobic009G137401 Sobic009G146500--Sobic003G312900 Sobic002G324801 Sobic002G324801 Sobic009G146500--Sobic002G324801 Sobic006G072701--Sobic008G083100 Sobic006G072701--Sobic004G084600 Sobic006G072701--Sobic001G191500 Sobic009G026700 Sobic009G026700 Sobic006G072701--Sobic009G026700 Sobic006G072701--Sobic002G171901 Sobic006G072701--Sobic007G182300 Sobic006G072701--Sobic006G041200 Sobic009G074800 Sobic009G074800 Sobic006G072701--Sobic009G074800 Sobic001G250750 Sobic001G250750 Sobic006G072701--Sobic001G250750 Sobic002G171901--Sobic004G084600 Sobic002G171901--Sobic003G334400 Sobic002G171901--Sobic008G085800 Sobic002G171901--Sobic007G203800 Sobic002G171901--Sobic004G117850 Sobic002G171901--Sobic006G041200 Sobic002G171901--Sobic006G072701 Sobic002G171901--Sobic006G111000 Sobic002G171901--Sobic010G163666 Sobic008G190600 Sobic008G190600 Sobic001G191500--Sobic008G190600 Sobic001G191500--Sobic008G142200 Sobic001G191500--Sobic009G137401 Sobic006G157450 Sobic006G157450 Sobic001G191500--Sobic006G157450 Sobic001G191500--Sobic006G072701 Sobic001G191500--Sobic001G190900 Sobic001G191500--Sobic008G083100 Sobic004G033650 Sobic004G033650 Sobic001G191500--Sobic004G033650 Sobic001G191500--Sobic009G074800
Octagon: transcription factors


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